FFCP PHASE1:Hg19::chr7:128046035..128046058,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:128046035..128046058,-
|short_description=p3@IMPDH1
|description=CAGE_peak_3_at_IMPDH1_5end
|association_with_transcript=-11bp_to_NM_001142573,NM_001142574...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3614 | |EntrezGene=3614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6052 | |HGNC=6052 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVM8,P20839,B4DE09 | |UniProt=B3KVM8,P20839,B4DE09 | ||
|association_with_transcript=-11bp_to_NM_001142573,NM_001142574,NM_001142575,uc003vmt.2,uc011kol.1,uc011kom.1_5end | |||
|cluster_id=chr7:128046035..128046058,- | |||
|description=CAGE_peak_3_at_IMPDH1_5end | |||
|id=chr7:128046035..128046058,- | |||
|ontology_enrichment_celltype=CL:0000548!1.22e-18!679;CL:0000004!1.22e-18!679;CL:0000255!1.22e-18!679;CL:0000012!1.53e-18!682;CL:0000220!3.11e-18!246;CL:0000222!7.22e-18!119;CL:0002321!1.55e-17!248;CL:0002371!1.37e-16!591;CL:0000144!8.82e-16!625;CL:0000055!1.30e-13!180;CL:0000066!1.49e-11!254;CL:0002078!2.04e-10!44;CL:0000003!2.25e-10!722;CL:0000115!3.53e-10!35;CL:0000183!2.31e-09!59;CL:0002139!2.35e-09!24;CL:0000680!2.97e-09!57;CL:0000056!2.97e-09!57;CL:0000355!2.97e-09!57;CL:0000071!9.25e-09!18;CL:0002546!9.25e-09!18;CL:0000187!1.24e-08!54;CL:0000076!1.57e-08!62;CL:0000063!2.09e-08!578;CL:0000213!3.49e-08!57;CL:0000215!3.49e-08!57;CL:0000057!5.67e-08!75;CL:0000192!5.86e-08!42;CL:0000514!5.86e-08!42;CL:0000393!6.12e-07!60;CL:0000211!6.12e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.74e-09;36!CL:0002139;3.25e-09;24!CL:0000071;8.73e-09;18!CL:0002078;2.41e-07;45!CL:1000449;2.75e-07;15!CL:1000497;5.95e-07;17!CL:0002518;5.95e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.46e-18,121;CL:0002321,1.58e-18,250;CL:0000066,6.93e-12,253;CL:0002078,5.09e-11,45;CL:0000115,8.63e-11,36;CL:0000680,1.79e-09,58;CL:0000056,1.79e-09,58;CL:0000355,1.79e-09,58;CL:0002139,2.01e-09,24;CL:0000187,7.59e-09,55;CL:0000071,8.12e-09,18;CL:0002546,8.12e-09,18;CL:0000076,8.59e-09,63;CL:0000213,1.42e-08,58;CL:0000215,1.42e-08,58;CL:0000057,4.30e-08,76;CL:0000192,5.90e-08,43;CL:0000514,5.90e-08,43;CL:0000393,2.74e-07,61;CL:0000211,2.74e-07,61;CL:1000449,4.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;8.73e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.24e-13!79;UBERON:0007798!3.24e-13!79;UBERON:0000055!4.79e-13!69;UBERON:0000486!2.04e-12!82;UBERON:0004872!3.68e-12!84;UBERON:0001981!3.74e-11!60;UBERON:0007500!3.74e-11!60;UBERON:0004537!3.74e-11!60;UBERON:0006965!3.74e-11!60;UBERON:0003914!2.09e-10!118;UBERON:0000119!9.23e-10!312;UBERON:0000914!9.86e-10!83;UBERON:0002329!9.86e-10!83;UBERON:0003077!9.86e-10!83;UBERON:0003059!9.86e-10!83;UBERON:0007282!9.86e-10!83;UBERON:0009618!9.86e-10!83;UBERON:0007285!9.86e-10!83;UBERON:0004290!1.05e-09!70;UBERON:0000483!1.39e-09!309;UBERON:0000490!2.51e-09!138;UBERON:0000487!3.30e-09!22;UBERON:0006914!5.72e-09!25;UBERON:0004535!6.09e-09!110;UBERON:0005256!7.09e-09!143;UBERON:0001986!9.25e-09!18;UBERON:0004638!9.25e-09!18;UBERON:0004852!9.25e-09!18;UBERON:0001637!1.67e-08!42;UBERON:0003509!1.67e-08!42;UBERON:0004572!1.67e-08!42;UBERON:0001009!1.79e-08!113;UBERON:0002100!6.83e-08!216;UBERON:0001134!8.60e-08!61;UBERON:0002036!8.60e-08!61;UBERON:0003082!8.60e-08!61;UBERON:0003104!2.02e-07!238;UBERON:0009142!2.02e-07!238;UBERON:0002385!3.77e-07!63;UBERON:0001015!3.77e-07!63;UBERON:0000383!3.77e-07!63;UBERON:0003102!5.80e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.38e-09;74!UBERON:0000487;2.86e-09;22!UBERON:0006914;3.85e-09;25!UBERON:0004638;8.73e-09;18!UBERON:0001986;8.73e-09;18!UBERON:0004852;8.73e-09;18!UBERON:0000490;5.98e-08;33!UBERON:0007500;9.54e-08;56!UBERON:0001981;9.54e-08;56!UBERON:0004537;9.54e-08;56!UBERON:0000055;2.32e-07;65!UBERON:0006555;2.75e-07;15!UBERON:0004819;2.75e-07;15!UBERON:0001285;2.75e-07;15!UBERON:0007684;2.75e-07;15!UBERON:0000025;5.87e-07;93 | |||
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| ||
|short_description=p3@IMPDH1 | |||
}} | }} |
Latest revision as of 03:25, 16 September 2015
Short description: | p3@IMPDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IMPDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_NM_001142573, NM_001142574, NM_001142575, uc003vmt.2, uc011kol.1, uc011kom.1_5end |
EntrezGene: | IMPDH1 |
HGNC: | 6052 |
UniProt: | B3KVM8P20839B4DE09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.46e-18 | 121 |
embryonic cell | 1.58e-18 | 250 |
epithelial cell | 6.93e-12 | 253 |
meso-epithelial cell | 5.09e-11 | 45 |
endothelial cell | 8.63e-11 | 36 |
muscle precursor cell | 1.79e-09 | 58 |
myoblast | 1.79e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.79e-09 | 58 |
endothelial cell of vascular tree | 2.01e-09 | 24 |
muscle cell | 7.59e-09 | 55 |
blood vessel endothelial cell | 8.12e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.12e-09 | 18 |
squamous epithelial cell | 8.59e-09 | 63 |
lining cell | 1.42e-08 | 58 |
barrier cell | 1.42e-08 | 58 |
fibroblast | 4.30e-08 | 76 |
smooth muscle cell | 5.90e-08 | 43 |
smooth muscle myoblast | 5.90e-08 | 43 |
electrically responsive cell | 2.74e-07 | 61 |
electrically active cell | 2.74e-07 | 61 |
epithelial cell of nephron | 4.94e-07 | 15 |