FFCP PHASE1:Hg19::chr17:4900782..4900803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388324 | |EntrezGene=388324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32224 | |HGNC=32224 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VD86 | |UniProt=Q0VD86 | ||
|association_with_transcript=101bp_to_ENST00000355025,ENST00000396829,NM_001167985,NM_001167986,NM_001167987,NM_213726,uc002gal.2,uc002gam.2_5end | |association_with_transcript=101bp_to_ENST00000355025,ENST00000396829,NM_001167985,NM_001167986,NM_001167987,NM_213726,uc002gal.2,uc002gam.2_5end | ||
|cluster_id=chr17:4900782..4900803,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_INCA1_5end | |description=CAGE_peak_3_at_INCA1_5end | ||
|id=chr17:4900782..4900803,- | |id=chr17:4900782..4900803,- | ||
|ontology_enrichment_celltype=CL:0000771;2.60e-10;2!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002567;2.71e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000771;2.60e-10;2!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002567;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.27e-10,2;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0002567,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.52e-08;10!UBERON:0005564;2.52e-08;10!UBERON:0006215;2.71e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002135;2.97e-19;1!UBERON:0000200;6.12e-13;6!UBERON:0002771;2.60e-10;2!UBERON:0002702;2.60e-10;2!UBERON:0002133;2.60e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0001950;2.54e-08;20!UBERON:0003135;1.20e-07;11!UBERON:0002619;1.20e-07;22!UBERON:0001870;2.71e-07;3!UBERON:0003978;2.71e-07;3!UBERON:0000946;2.71e-07;3!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3!UBERON:0000956;7.95e-07;25!UBERON:0000203;7.95e-07;25 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.16e-22!57;UBERON:0005068!6.16e-22!57;UBERON:0006241!6.16e-22!57;UBERON:0007135!6.16e-22!57;UBERON:0002616!1.93e-19!59;UBERON:0002020!6.14e-17!34;UBERON:0003528!6.14e-17!34;UBERON:0001017!6.77e-17!82;UBERON:0003075!7.84e-17!86;UBERON:0007284!7.84e-17!86;UBERON:0005743!1.59e-16!86;UBERON:0001893!1.71e-16!34;UBERON:0007023!1.74e-16!115;UBERON:0000955!6.82e-16!69;UBERON:0006238!6.82e-16!69;UBERON:0002780!1.48e-15!41;UBERON:0001890!1.48e-15!41;UBERON:0006240!1.48e-15!41;UBERON:0002346!1.56e-15!90;UBERON:0002791!1.93e-15!33;UBERON:0003080!5.25e-15!42;UBERON:0001869!1.14e-14!32;UBERON:0000073!7.88e-14!94;UBERON:0001016!7.88e-14!94;UBERON:0004121!2.94e-11!169;UBERON:0000956!5.55e-11!25;UBERON:0000203!5.55e-11!25;UBERON:0000924!1.18e-10!173;UBERON:0006601!1.18e-10!173;UBERON:0000153!3.97e-10!129;UBERON:0007811!3.97e-10!129;UBERON:0003056!5.85e-10!61;UBERON:0000033!6.65e-10!123;UBERON:0002619!1.51e-08!22;UBERON:0003076!2.68e-08!15;UBERON:0003057!2.68e-08!15;UBERON:0001950!4.09e-08!20;UBERON:0002308!8.64e-08!9;UBERON:0000125!8.64e-08!9;UBERON:0004733!4.54e-07!12;UBERON:0002028!4.54e-07!12;UBERON:0007277!4.54e-07!12;UBERON:0000477!6.52e-07!286;UBERON:0000483!7.31e-07!309;UBERON:0002298!7.38e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;2.97e-19;1!UBERON:0000200;6.12e-13;6!UBERON:0002771;2.60e-10;2!UBERON:0002702;2.60e-10;2!UBERON:0002133;2.60e-10;2!UBERON:0000473;3.52e-10;8!UBERON:0001950;2.54e-08;20!UBERON:0003135;1.20e-07;11!UBERON:0002619;1.20e-07;22!UBERON:0001870;2.71e-07;3!UBERON:0003978;2.71e-07;3!UBERON:0000946;2.71e-07;3!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3!UBERON:0000956;7.95e-07;25!UBERON:0000203;7.95e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,3.91e-19,1;UBERON:0000200,8.78e-13,6;UBERON:0002133,2.99e-10,2;UBERON:0002771,3.27e-10,2;UBERON:0000473,3.52e-10,8;UBERON:0002702,3.58e-10,2;UBERON:0001950,2.71e-08,20;UBERON:0003135,1.20e-07,11;UBERON:0002619,1.27e-07,22;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0003978,2.97e-07,3;UBERON:0009751,2.97e-07,3;UBERON:0000946,2.97e-07,3;UBERON:0002523,2.97e-07,3;UBERON:0005983,2.97e-07,3;UBERON:0002165,2.97e-07,3;UBERON:0002062,2.97e-07,3;UBERON:0007280,2.97e-07,3;UBERON:0001870,3.35e-07,3;UBERON:0000956,8.37e-07,25;UBERON:0000203,8.37e-07,25 | |||
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| ||
|short_description=p3@INCA1 | |short_description=p3@INCA1 | ||
}} | }} |
Latest revision as of 04:37, 16 September 2015
Short description: | p3@INCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_INCA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 101bp_to_ENST00000355025, ENST00000396829, NM_001167985, NM_001167986, NM_001167987, NM_213726, uc002gal.2, uc002gam.2_5end |
EntrezGene: | INCA1 |
HGNC: | 32224 |
UniProt: | Q0VD86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.27e-10 | 2 |
hair follicle dermal papilla cell | 2.32e-07 | 3 |
stem cell of epidermis | 2.32e-07 | 3 |
light melanocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 3.91e-19 | 1 |
gyrus | 8.78e-13 | 6 |
atrioventricular valve | 2.99e-10 | 2 |
middle temporal gyrus | 3.27e-10 | 2 |
testis | 3.52e-10 | 8 |
middle frontal gyrus | 3.58e-10 | 2 |
neocortex | 2.71e-08 | 20 |
male reproductive organ | 1.20e-07 | 11 |
regional part of cerebral cortex | 1.27e-07 | 22 |
dermal papilla | 2.32e-07 | 3 |
papillary layer of dermis | 2.32e-07 | 3 |
valve | 2.97e-07 | 3 |
cardiac mesenchyme | 2.97e-07 | 3 |
cardial valve | 2.97e-07 | 3 |
tunica intima | 2.97e-07 | 3 |
heart layer | 2.97e-07 | 3 |
endocardium | 2.97e-07 | 3 |
endocardial cushion | 2.97e-07 | 3 |
presumptive endocardium | 2.97e-07 | 3 |
frontal cortex | 3.35e-07 | 3 |
cerebral cortex | 8.37e-07 | 25 |
pallium | 8.37e-07 | 25 |