FFCP PHASE1:Hg19::chr14:78083112..78083140,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:78083112..78083140,- to FFCP PHASE1:Hg19::chr14:78083112..78083140,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9517 | |EntrezGene=9517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11278 | |HGNC=11278 | ||
|TSSclassifier=strong | |||
|UniProt=O15270 | |UniProt=O15270 | ||
|association_with_transcript=0bp_to_ENST00000216484_5end | |||
|cluster_id=chr14:78083112..78083140,- | |||
|description=CAGE_peak_3_at_SPTLC2_5end | |||
|id=chr14:78083112..78083140,- | |||
|ontology_enrichment_celltype=CL:0000037!8.28e-28!172;CL:0000566!8.28e-28!172;CL:0002032!1.48e-24!165;CL:0000837!1.48e-24!165;CL:0000988!8.43e-23!182;CL:0000738!1.57e-18!140;CL:0000763!2.72e-16!112;CL:0000049!2.72e-16!112;CL:0002031!4.89e-15!124;CL:0002087!4.95e-15!119;CL:0002057!1.15e-14!42;CL:0000860!4.07e-12!45;CL:0000766!1.96e-09!76;CL:0000838!4.98e-08!52;CL:0000542!5.03e-08!53;CL:0000051!5.03e-08!53;CL:0000557!6.61e-08!71;CL:0000839!2.01e-07!70;CL:0000236!2.41e-07!14;CL:0002009!3.34e-07!65;CL:0002194!8.71e-07!63;CL:0000576!8.71e-07!63;CL:0000040!8.71e-07!63;CL:0000559!8.71e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.99e-10;33!CL:0002057;3.99e-10;33!CL:0000576;1.09e-08;48!CL:0000236;1.29e-07;13!CL:0000763;2.95e-07;100!CL:0000473;4.02e-07;39!CL:0000234;4.02e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.50e-30,168;CL:0002032,2.16e-26,161;CL:0000837,2.16e-26,161;CL:0000988,2.52e-24,177;CL:0000738,3.17e-20,136;CL:0000763,4.35e-18,108;CL:0000049,4.35e-18,108;CL:0002087,1.14e-16,115;CL:0002031,1.25e-16,120;CL:0000860,1.15e-14,42;CL:0002057,1.15e-14,42;CL:0000473,1.02e-11,48;CL:0000234,1.02e-11,48;CL:0000766,5.05e-11,72;CL:0000557,2.27e-09,67;CL:0000839,7.80e-09,66;CL:0002009,1.18e-08,61;CL:0002194,3.32e-08,59;CL:0000576,3.32e-08,59;CL:0000040,3.32e-08,59;CL:0000559,3.32e-08,59;CL:0000838,4.98e-08,52;CL:0000542,5.03e-08,53;CL:0000051,5.03e-08,53;CL:0000236,2.41e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-15!115;UBERON:0001049!1.50e-11!57;UBERON:0005068!1.50e-11!57;UBERON:0006241!1.50e-11!57;UBERON:0007135!1.50e-11!57;UBERON:0003080!6.61e-10!42;UBERON:0002780!9.23e-10!41;UBERON:0001890!9.23e-10!41;UBERON:0006240!9.23e-10!41;UBERON:0002193!1.29e-08!112;UBERON:0002390!1.65e-08!102;UBERON:0003061!1.65e-08!102;UBERON:0002616!1.97e-08!59;UBERON:0002020!8.04e-08!34;UBERON:0003528!8.04e-08!34;UBERON:0001893!1.19e-07!34;UBERON:0002791!2.30e-07!33;UBERON:0003075!5.37e-07!86;UBERON:0007284!5.37e-07!86;UBERON:0002346!6.56e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.80e-07;41!UBERON:0001890;1.80e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.81e-15,114;UBERON:0001049,2.13e-11,56;UBERON:0005068,2.13e-11,56;UBERON:0006241,2.13e-11,56;UBERON:0007135,2.13e-11,56;UBERON:0000073,6.33e-10,53;UBERON:0002616,6.33e-10,53;UBERON:0002193,8.88e-10,108;UBERON:0002780,9.23e-10,41;UBERON:0001890,9.23e-10,41;UBERON:0003080,9.23e-10,41;UBERON:0006240,9.23e-10,41;UBERON:0002390,9.92e-10,98;UBERON:0003061,9.92e-10,98;UBERON:0002405,2.97e-08,93;UBERON:0003528,8.04e-08,34;UBERON:0002020,8.04e-08,34;UBERON:0001893,1.19e-07,34;UBERON:0002371,2.53e-07,76;UBERON:0002791,7.26e-07,32 | |||
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|short_description=p3@SPTLC2 | |||
}} | }} |
Latest revision as of 06:28, 16 September 2015
Short description: | p3@SPTLC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPTLC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216484_5end |
EntrezGene: | SPTLC2 |
HGNC: | 11278 |
UniProt: | O15270 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.50e-30 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-26 | 161 |
hematopoietic cell | 2.52e-24 | 177 |
leukocyte | 3.17e-20 | 136 |
myeloid cell | 4.35e-18 | 108 |
common myeloid progenitor | 4.35e-18 | 108 |
nongranular leukocyte | 1.14e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-16 | 120 |
classical monocyte | 1.15e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-14 | 42 |
defensive cell | 1.02e-11 | 48 |
phagocyte | 1.02e-11 | 48 |
myeloid leukocyte | 5.05e-11 | 72 |
granulocyte monocyte progenitor cell | 2.27e-09 | 67 |
myeloid lineage restricted progenitor cell | 7.80e-09 | 66 |
macrophage dendritic cell progenitor | 1.18e-08 | 61 |
monopoietic cell | 3.32e-08 | 59 |
monocyte | 3.32e-08 | 59 |
monoblast | 3.32e-08 | 59 |
promonocyte | 3.32e-08 | 59 |
lymphoid lineage restricted progenitor cell | 4.98e-08 | 52 |
lymphocyte | 5.03e-08 | 53 |
common lymphoid progenitor | 5.03e-08 | 53 |
B cell | 2.41e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.81e-15 | 114 |
neural tube | 2.13e-11 | 56 |
neural rod | 2.13e-11 | 56 |
future spinal cord | 2.13e-11 | 56 |
neural keel | 2.13e-11 | 56 |
regional part of nervous system | 6.33e-10 | 53 |
regional part of brain | 6.33e-10 | 53 |
hemolymphoid system | 8.88e-10 | 108 |
regional part of forebrain | 9.23e-10 | 41 |
forebrain | 9.23e-10 | 41 |
anterior neural tube | 9.23e-10 | 41 |
future forebrain | 9.23e-10 | 41 |
hematopoietic system | 9.92e-10 | 98 |
blood island | 9.92e-10 | 98 |
immune system | 2.97e-08 | 93 |
brain grey matter | 8.04e-08 | 34 |
gray matter | 8.04e-08 | 34 |
telencephalon | 1.19e-07 | 34 |
bone marrow | 2.53e-07 | 76 |
regional part of telencephalon | 7.26e-07 | 32 |