FFCP PHASE1:Hg19::chr14:78083149..78083160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9517 | |EntrezGene=9517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11278 | |HGNC=11278 | ||
|TSSclassifier=strong | |||
|UniProt=O15270 | |UniProt=O15270 | ||
|association_with_transcript=-33bp_to_ENST00000216484_5end | |association_with_transcript=-33bp_to_ENST00000216484_5end | ||
|cluster_id=chr14:78083149..78083160,- | |||
|description=CAGE_peak_4_at_SPTLC2_5end | |description=CAGE_peak_4_at_SPTLC2_5end | ||
|id=chr14:78083149..78083160,- | |id=chr14:78083149..78083160,- | ||
|ontology_enrichment_celltype=CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000791!7.79e-08!18;CL:0000789!7.79e-08!18;CL:0002420!7.79e-08!18;CL:0002419!7.79e-08!18;CL:0000790!7.79e-08!18;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000988!1.94e-07!182;CL:0000738!9.28e-07!140 | |ontology_enrichment_celltype=CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000791!7.79e-08!18;CL:0000789!7.79e-08!18;CL:0002420!7.79e-08!18;CL:0002419!7.79e-08!18;CL:0000790!7.79e-08!18;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000988!1.94e-07!182;CL:0000738!9.28e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.24e-08;7!CL:0000586;3.24e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.30e-08,7;CL:0000586,2.30e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-17!115;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0003080!1.18e-10!42;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0002616!3.04e-09!59;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0001893!1.70e-08!34;UBERON:0002791!2.72e-08!33;UBERON:0000955!4.41e-08!69;UBERON:0006238!4.41e-08!69;UBERON:0003075!6.73e-08!86;UBERON:0007284!6.73e-08!86;UBERON:0000073!9.61e-08!94;UBERON:0001016!9.61e-08!94;UBERON:0002346!1.13e-07!90;UBERON:0001869!1.32e-07!32;UBERON:0005743!2.32e-07!86;UBERON:0001017!8.69e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!2.96e-17!115;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0003080!1.18e-10!42;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0002616!3.04e-09!59;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0001893!1.70e-08!34;UBERON:0002791!2.72e-08!33;UBERON:0000955!4.41e-08!69;UBERON:0006238!4.41e-08!69;UBERON:0003075!6.73e-08!86;UBERON:0007284!6.73e-08!86;UBERON:0000073!9.61e-08!94;UBERON:0001016!9.61e-08!94;UBERON:0002346!1.13e-07!90;UBERON:0001869!1.32e-07!32;UBERON:0005743!2.32e-07!86;UBERON:0001017!8.69e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000125;8.26e-10;9!UBERON:0002308;8.26e-10;9!UBERON:0002420;1.55e-07;9!UBERON:0007245;1.55e-07;9!UBERON:0010009;1.55e-07;9!UBERON:0010011;1.55e-07;9!UBERON:0000454;1.55e-07;9!UBERON:0009663;1.88e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-11,114;UBERON:0000125,8.29e-11,9;UBERON:0002308,8.29e-11,9;UBERON:0001049,2.07e-10,56;UBERON:0005068,2.07e-10,56;UBERON:0006241,2.07e-10,56;UBERON:0007135,2.07e-10,56;UBERON:0002420,1.52e-08,9;UBERON:0007245,1.52e-08,9;UBERON:0010009,1.52e-08,9;UBERON:0010011,1.52e-08,9;UBERON:0000454,1.52e-08,9;UBERON:0009663,2.81e-08,7;UBERON:0000073,3.15e-08,53;UBERON:0002616,3.15e-08,53;UBERON:0002780,1.23e-07,41;UBERON:0001890,1.23e-07,41;UBERON:0003080,1.23e-07,41;UBERON:0006240,1.23e-07,41;UBERON:0003528,2.17e-07,34;UBERON:0002020,2.17e-07,34;UBERON:0000369,2.92e-07,4;UBERON:0002435,2.92e-07,4;UBERON:0000204,2.92e-07,4;UBERON:0010082,2.92e-07,4 | |||
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| ||
|short_description=p4@SPTLC2 | |short_description=p4@SPTLC2 | ||
}} | }} |
Latest revision as of 06:29, 16 September 2015
Short description: | p4@SPTLC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPTLC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000216484_5end |
EntrezGene: | SPTLC2 |
HGNC: | 11278 |
UniProt: | O15270 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.30e-08 | 7 |
germ cell | 2.30e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-11 | 114 |
neural nucleus | 8.29e-11 | 9 |
nucleus of brain | 8.29e-11 | 9 |
neural tube | 2.07e-10 | 56 |
neural rod | 2.07e-10 | 56 |
future spinal cord | 2.07e-10 | 56 |
neural keel | 2.07e-10 | 56 |
basal ganglion | 1.52e-08 | 9 |
nuclear complex of neuraxis | 1.52e-08 | 9 |
aggregate regional part of brain | 1.52e-08 | 9 |
collection of basal ganglia | 1.52e-08 | 9 |
cerebral subcortex | 1.52e-08 | 9 |
telencephalic nucleus | 2.81e-08 | 7 |
regional part of nervous system | 3.15e-08 | 53 |
regional part of brain | 3.15e-08 | 53 |
regional part of forebrain | 1.23e-07 | 41 |
forebrain | 1.23e-07 | 41 |
anterior neural tube | 1.23e-07 | 41 |
future forebrain | 1.23e-07 | 41 |
brain grey matter | 2.17e-07 | 34 |
gray matter | 2.17e-07 | 34 |
corpus striatum | 2.92e-07 | 4 |
striatum | 2.92e-07 | 4 |
ventral part of telencephalon | 2.92e-07 | 4 |
future corpus striatum | 2.92e-07 | 4 |