FFCP PHASE1:Hg19::chr2:241396106..241396123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100130449 | |EntrezGene=100130449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B5MD03 | |UniProt=B5MD03 | ||
|association_with_transcript=0bp_to_ENST00000404891,NR_024014,uc002vyy.1_5end | |association_with_transcript=0bp_to_ENST00000404891,NR_024014,uc002vyy.1_5end | ||
|cluster_id=chr2:241396106..241396123,- | |||
|coexpression_cluster_id=C4209 | |coexpression_cluster_id=C4209 | ||
|description=CAGE_peak_1_at_PP14571_5end | |description=CAGE_peak_1_at_PP14571_5end | ||
|id=chr2:241396106..241396123,- | |id=chr2:241396106..241396123,- | ||
|ontology_enrichment_celltype=CL:0000066!1.58e-09!254;CL:1000507!8.92e-07!12;CL:1000494!8.92e-07!12;CL:0002076!9.98e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.58e-09!254;CL:1000507!8.92e-07!12;CL:1000494!8.92e-07!12;CL:0002076!9.98e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.63e-21;19!CL:0000039;4.23e-12;7!CL:0000586;4.23e-12;7!CL:0002541;1.07e-11;3!CL:0002577;1.27e-11;3!CL:0002536;3.26e-08;2!CL:1000507;5.51e-08;10!CL:1000494;5.51e-08;10!CL:0000575;9.82e-08;2!CL:1000449;2.40e-07;15!CL:0002537;2.81e-07;5!CL:0002681;9.36e-07;12!CL:0002584;9.36e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.68e-21,19;CL:0000039,4.04e-12,7;CL:0000586,4.04e-12,7;CL:0002541,1.09e-11,3;CL:0002577,1.29e-11,3;CL:0002536,3.20e-08,2;CL:0000066,3.43e-08,253;CL:1000507,4.76e-08,10;CL:1000494,4.76e-08,10;CL:0000575,9.99e-08,2;CL:1000449,2.11e-07,15;CL:0002537,2.81e-07,5;CL:0002681,8.51e-07,12;CL:0002584,8.51e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.71e-16!115;UBERON:0005631!5.80e-16!14;UBERON:0000158!5.80e-16!14;UBERON:0000064!7.80e-15!219;UBERON:0003124!6.19e-12!7;UBERON:0000478!3.01e-09!24;UBERON:0000464!3.97e-09!104;UBERON:0000058!1.08e-08!26;UBERON:0001893!1.79e-08!34;UBERON:0004119!2.48e-08!169;UBERON:0000925!2.48e-08!169;UBERON:0006595!2.48e-08!169;UBERON:0001869!2.58e-08!32;UBERON:0000062!7.11e-08!511;UBERON:0004876!7.12e-08!20;UBERON:0002791!7.43e-08!33;UBERON:0001049!8.43e-08!57;UBERON:0005068!8.43e-08!57;UBERON:0006241!8.43e-08!57;UBERON:0007135!8.43e-08!57;UBERON:0000153!1.08e-07!129;UBERON:0007811!1.08e-07!129;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0000080!1.31e-07!18;UBERON:0002120!1.31e-07!18;UBERON:0004875!1.31e-07!18;UBERON:0005721!1.31e-07!18;UBERON:0005754!1.31e-07!18;UBERON:0007297!1.31e-07!18;UBERON:0001987!1.59e-07!4;UBERON:0004340!1.59e-07!4;UBERON:0001004!1.64e-07!72;UBERON:0000466!1.90e-07!126;UBERON:0004111!3.18e-07!241;UBERON:0000065!4.44e-07!53;UBERON:0002780!4.95e-07!41;UBERON:0001890!4.95e-07!41;UBERON:0006240!4.95e-07!41;UBERON:0000077!5.05e-07!130;UBERON:0009773!8.92e-07!12;UBERON:0001231!8.92e-07!12;UBERON:0004810!8.92e-07!12;UBERON:0003080!9.32e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!4.71e-16!115;UBERON:0005631!5.80e-16!14;UBERON:0000158!5.80e-16!14;UBERON:0000064!7.80e-15!219;UBERON:0003124!6.19e-12!7;UBERON:0000478!3.01e-09!24;UBERON:0000464!3.97e-09!104;UBERON:0000058!1.08e-08!26;UBERON:0001893!1.79e-08!34;UBERON:0004119!2.48e-08!169;UBERON:0000925!2.48e-08!169;UBERON:0006595!2.48e-08!169;UBERON:0001869!2.58e-08!32;UBERON:0000062!7.11e-08!511;UBERON:0004876!7.12e-08!20;UBERON:0002791!7.43e-08!33;UBERON:0001049!8.43e-08!57;UBERON:0005068!8.43e-08!57;UBERON:0006241!8.43e-08!57;UBERON:0007135!8.43e-08!57;UBERON:0000153!1.08e-07!129;UBERON:0007811!1.08e-07!129;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0000080!1.31e-07!18;UBERON:0002120!1.31e-07!18;UBERON:0004875!1.31e-07!18;UBERON:0005721!1.31e-07!18;UBERON:0005754!1.31e-07!18;UBERON:0007297!1.31e-07!18;UBERON:0001987!1.59e-07!4;UBERON:0004340!1.59e-07!4;UBERON:0001004!1.64e-07!72;UBERON:0000466!1.90e-07!126;UBERON:0004111!3.18e-07!241;UBERON:0000065!4.44e-07!53;UBERON:0002780!4.95e-07!41;UBERON:0001890!4.95e-07!41;UBERON:0006240!4.95e-07!41;UBERON:0000077!5.05e-07!130;UBERON:0009773!8.92e-07!12;UBERON:0001231!8.92e-07!12;UBERON:0004810!8.92e-07!12;UBERON:0003080!9.32e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;8.31e-23;24!UBERON:0005631;2.20e-22;10!UBERON:0000158;2.20e-22;10!UBERON:0001987;5.14e-15;4!UBERON:0000305;4.94e-13;7!UBERON:0003124;1.07e-11;3!UBERON:0000920;1.07e-11;3!UBERON:0004211;5.51e-08;10!UBERON:0009773;5.51e-08;10!UBERON:0001231;5.51e-08;10!UBERON:0004810;5.51e-08;10!UBERON:0006562;1.18e-07;2!UBERON:0006555;2.40e-07;15!UBERON:0004819;2.40e-07;15!UBERON:0001285;2.40e-07;15!UBERON:0007684;2.40e-07;15!UBERON:0003127;4.41e-07;2!UBERON:0001225;9.36e-07;12!UBERON:0008987;9.36e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.68e-35,14;UBERON:0000158,2.68e-35,14;UBERON:0003124,5.94e-25,7;UBERON:0000478,8.40e-23,24;UBERON:0001987,5.24e-15,4;UBERON:0004340,5.24e-15,4;UBERON:0000305,4.88e-13,7;UBERON:0000920,1.09e-11,3;UBERON:0004871,2.34e-11,8;UBERON:0006554,3.98e-09,47;UBERON:0001008,7.05e-09,48;UBERON:0004923,1.97e-08,66;UBERON:0004810,4.76e-08,10;UBERON:0004211,2.11e-07,15;UBERON:0009773,2.11e-07,15;UBERON:0001231,2.11e-07,15;UBERON:0001285,2.11e-07,15;UBERON:0007684,2.11e-07,15;UBERON:0004208,2.11e-07,15;UBERON:0003127,4.55e-07,2;UBERON:0006555,6.74e-07,16;UBERON:0004819,6.74e-07,16;UBERON:0001225,8.51e-07,12;UBERON:0008987,8.51e-07,12 | |||
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| ||
|short_description=p1@PP14571 | |short_description=p1@PP14571 | ||
}} | }} |
Latest revision as of 07:36, 16 September 2015
Short description: | p1@PP14571 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PP14571_5end |
Coexpression cluster: | C4209_amniotic_endometrioid_Placental_pancreatic_chorionic_heart_placenta |
Association with transcript: | 0bp_to_ENST00000404891, NR_024014, uc002vyy.1_5end |
EntrezGene: | PP14571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.68e-21 | 19 |
germ line cell | 4.04e-12 | 7 |
germ cell | 4.04e-12 | 7 |
chorionic membrane mesenchymal stem cell | 1.09e-11 | 3 |
placental epithelial cell | 1.29e-11 | 3 |
amniotic epithelial cell | 3.20e-08 | 2 |
epithelial cell | 3.43e-08 | 253 |
kidney tubule cell | 4.76e-08 | 10 |
nephron tubule epithelial cell | 4.76e-08 | 10 |
corneal epithelial cell | 9.99e-08 | 2 |
epithelial cell of nephron | 2.11e-07 | 15 |
amnion mesenchymal stem cell | 2.81e-07 | 5 |
kidney cortical cell | 8.51e-07 | 12 |
renal cortical epithelial cell | 8.51e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.68e-35 | 14 |
membranous layer | 2.68e-35 | 14 |
chorion | 5.94e-25 | 7 |
extraembryonic structure | 8.40e-23 | 24 |
placenta | 5.24e-15 | 4 |
allantois | 5.24e-15 | 4 |
amnion | 4.88e-13 | 7 |
egg chorion | 1.09e-11 | 3 |
somatic layer of lateral plate mesoderm | 2.34e-11 | 8 |
urinary system structure | 3.98e-09 | 47 |
renal system | 7.05e-09 | 48 |
organ component layer | 1.97e-08 | 66 |
nephron tubule epithelium | 4.76e-08 | 10 |
nephron epithelium | 2.11e-07 | 15 |
renal tubule | 2.11e-07 | 15 |
nephron tubule | 2.11e-07 | 15 |
nephron | 2.11e-07 | 15 |
uriniferous tubule | 2.11e-07 | 15 |
nephrogenic mesenchyme | 2.11e-07 | 15 |
open tracheal system trachea | 4.55e-07 | 2 |
excretory tube | 6.74e-07 | 16 |
kidney epithelium | 6.74e-07 | 16 |
cortex of kidney | 8.51e-07 | 12 |
renal parenchyma | 8.51e-07 | 12 |