FFCP PHASE1:Hg19::chr2:241564655..241564668,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:241564655..241564668,+ to FFCP PHASE1:Hg19::chr2:241564655..241564668,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2859 | |EntrezGene=2859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4492 | |HGNC=4492 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC97,A8K2J1,B2RA17 | |UniProt=Q9HC97,A8K2J1,B2RA17 | ||
|association_with_transcript=0bp_to_ENST00000407714,NM_005301_5end | |||
|cluster_id=chr2:241564655..241564668,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_GPR35_5end | |||
|id=chr2:241564655..241564668,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.15e-56!112;CL:0000049!5.15e-56!112;CL:0000037!2.04e-54!172;CL:0000566!2.04e-54!172;CL:0002032!1.15e-52!165;CL:0000837!1.15e-52!165;CL:0000988!2.63e-49!182;CL:0002057!2.49e-47!42;CL:0000839!2.71e-44!70;CL:0002194!6.28e-44!63;CL:0000576!6.28e-44!63;CL:0000040!6.28e-44!63;CL:0000559!6.28e-44!63;CL:0002009!1.82e-43!65;CL:0000557!4.72e-43!71;CL:0000860!5.96e-43!45;CL:0000766!2.54e-42!76;CL:0000738!4.41e-40!140;CL:0002087!2.44e-39!119;CL:0002031!6.60e-39!124;CL:0000134!3.24e-15!358;CL:0002320!2.94e-14!365;CL:0000219!2.26e-13!390;CL:0002393!1.18e-09!9;CL:0002397!1.18e-09!9;CL:0000048!1.21e-07!430;CL:0000034!1.89e-07!444;CL:0000723!3.86e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-65;33!CL:0002057;2.21e-65;33!CL:0000473;1.48e-50;39!CL:0000234;1.48e-50;39!CL:0000576;3.45e-46;48!CL:0000766;7.13e-30;69!CL:0000763;5.14e-23;100!CL:0002087;4.30e-12;104!CL:0002393;9.99e-12;6!CL:0002397;9.99e-12;6!CL:0000738;9.52e-10;136!CL:0000988;2.47e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.41e-84,42;CL:0002057,4.41e-84,42;CL:0000473,4.21e-79,48;CL:0000234,4.21e-79,48;CL:0000763,1.99e-74,108;CL:0000049,1.99e-74,108;CL:0002194,6.43e-70,59;CL:0000576,6.43e-70,59;CL:0000040,6.43e-70,59;CL:0000559,6.43e-70,59;CL:0000839,9.75e-70,66;CL:0002009,3.35e-67,61;CL:0000557,1.05e-65,67;CL:0000766,8.06e-63,72;CL:0000037,2.57e-51,168;CL:0002032,2.89e-49,161;CL:0000837,2.89e-49,161;CL:0000988,9.43e-48,177;CL:0002087,1.65e-37,115;CL:0002031,4.88e-37,120;CL:0000738,7.86e-34,136;CL:0000134,6.52e-17,354;CL:0002320,3.20e-16,361;CL:0000219,1.95e-14,386;CL:0002393,1.59e-13,9;CL:0002397,1.59e-13,9;CL:0000048,7.32e-11,427;CL:0000723,1.84e-10,433;CL:0000034,6.05e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.03e-61;42!CL:0000049;1.71e-21;108 | |||
|ontology_enrichment_disease=DOID:8692!2.08e-10!31;DOID:1240!5.75e-09!39;DOID:2531!8.82e-07!51;DOID:0060083!8.82e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.59e-10;31!DOID:1240;7.46e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.64e-10,31;DOID:1240,4.39e-09,39;DOID:2531,4.67e-07,51;DOID:0060083,4.67e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-47!102;UBERON:0003061!1.17e-47!102;UBERON:0002193!1.71e-43!112;UBERON:0001474!6.36e-38!86;UBERON:0002371!2.79e-37!80;UBERON:0004765!6.99e-29!101;UBERON:0001434!6.99e-29!101;UBERON:0002405!2.79e-27!115;UBERON:0002384!1.60e-13!375;UBERON:0003081!3.57e-13!216;UBERON:0002204!1.30e-10!167;UBERON:0000178!3.76e-07!15;UBERON:0000179!3.76e-07!15;UBERON:0000463!3.76e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.43e-09;15!UBERON:0000179;4.43e-09;15!UBERON:0000463;4.43e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-66,98;UBERON:0003061,1.39e-66,98;UBERON:0001474,4.35e-61,82;UBERON:0002193,6.76e-59,108;UBERON:0002371,9.44e-59,76;UBERON:0004765,2.38e-54,90;UBERON:0002405,7.46e-50,93;UBERON:0001434,1.95e-47,100;UBERON:0003081,1.15e-23,203;UBERON:0002204,1.56e-22,167;UBERON:0002384,5.05e-16,371;UBERON:0000926,8.38e-10,315;UBERON:0004120,8.38e-10,315;UBERON:0006603,8.38e-10,315;UBERON:0000178,4.04e-09,15;UBERON:0000179,4.04e-09,15;UBERON:0000463,4.04e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,1.57345710739562,1.15148819429164,0.928896739896456,0,0,0,0,0,1.17440175733939,1.66198622559563,1.20326668482085,1.30206522429511,0.223915474239924,1.29557466407592,0.257575567634187,17.1569921759886,9.82477453590904,6.54976965207104,12.7835970298127,9.86802931252382,6.50383378879718,20.7138522471948,10.7587496742222,9.93225365532058,3.10271112662957,5.16387746867061,4.06279459783025,10.5415710143859,7.91427835167753,4.49446968890169,9.48860066349798,4.8139354061414,4.47535988059329,16.8224163095225,8.37747362010854,5.11469700639233,8.12585868160035,9.07816359505824,4.35975574296902,16.0799145764316,10.9511412868242,8.68755378820467,4.23779651843358,5.15588690382591,4.43047342417238,3.16882929467913,2.12604299965044,2.51590374610051,6.40273197535022,3.60424542819615,3.69668849403284,2.85012743741249,0.79566670879636,2.55729815270488,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.790152254325231,0,0,0.822405995998037,0,0.32592226663359,0,0,0.779873198196215,0.294605907474837,0,0,0.384273959177026,1.1705341280389,1.97325485524411,2.48715016007264,1.15921234294021,0.14828656316206,0,0,2.03956816855619,0.383220493601921,0,0,0.318565414324097,0,0,0.602300476311091,0.895906278080929,0,0.236777252044017,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.196468613246569,0,0,2.92092654289215,3.65672448328461,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,3.52193736052904,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,0,0,0,0,0,0,0,13.5623024232168,0.985153801009636,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,1.86091223510599,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0.618246069886334,2.19766715564024,2.31026599777646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0,1.13929437434833,1.42939065274673,2.87953591160336,2.59389324477087,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,4.19116680008915,4.0216127727797,1.05836791361941,0,7.01992945283647,1.59764275323235,1.09675927041116,5.01268954180134,0.169291777801603,4.97823032821469,7.06298975168666,4.25846237690326,2.06103206853459,0,0.447352215784832,0.333698283423817,1.36771666781428,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0,2.56010021552684,1.6480387422676,0,0.19924798825107,0.552567831062295,0,1.02268682502155,0,0,0,0,9.71987503431056,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,7.84901281975124,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0.0801588202515337,2.13452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,1.65695622138878,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.79994958341972,8.21526318644885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77398933079059,0,2.21875575573872,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0,0,0,0,0.156986185701028,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,1.03382309777839,0.386747327841463,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0.213233981900981,0,0.322944549180031,0.31037357147929,0,0.0636471582781649,0,0,0,0.336760265072938,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0.320568492303233 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568492303233 | ||
|short_description=p3@GPR35 | |||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p3@GPR35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR35_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000407714, NM_005301_5end |
EntrezGene: | GPR35 |
HGNC: | 4492 |
UniProt: | Q9HC97A8K2J1B2RA17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.41e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.41e-84 | 42 |
defensive cell | 4.21e-79 | 48 |
phagocyte | 4.21e-79 | 48 |
myeloid cell | 1.99e-74 | 108 |
common myeloid progenitor | 1.99e-74 | 108 |
monopoietic cell | 6.43e-70 | 59 |
monocyte | 6.43e-70 | 59 |
monoblast | 6.43e-70 | 59 |
promonocyte | 6.43e-70 | 59 |
myeloid lineage restricted progenitor cell | 9.75e-70 | 66 |
macrophage dendritic cell progenitor | 3.35e-67 | 61 |
granulocyte monocyte progenitor cell | 1.05e-65 | 67 |
myeloid leukocyte | 8.06e-63 | 72 |
hematopoietic stem cell | 2.57e-51 | 168 |
hematopoietic oligopotent progenitor cell | 2.89e-49 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-49 | 161 |
hematopoietic cell | 9.43e-48 | 177 |
nongranular leukocyte | 1.65e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 4.88e-37 | 120 |
leukocyte | 7.86e-34 | 136 |
mesenchymal cell | 6.52e-17 | 354 |
connective tissue cell | 3.20e-16 | 361 |
motile cell | 1.95e-14 | 386 |
intermediate monocyte | 1.59e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.59e-13 | 9 |
multi fate stem cell | 7.32e-11 | 427 |
somatic stem cell | 1.84e-10 | 433 |
stem cell | 6.05e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-66 | 98 |
blood island | 1.39e-66 | 98 |
bone element | 4.35e-61 | 82 |
hemolymphoid system | 6.76e-59 | 108 |
bone marrow | 9.44e-59 | 76 |
skeletal element | 2.38e-54 | 90 |
immune system | 7.46e-50 | 93 |
skeletal system | 1.95e-47 | 100 |
lateral plate mesoderm | 1.15e-23 | 203 |
musculoskeletal system | 1.56e-22 | 167 |
connective tissue | 5.05e-16 | 371 |
mesoderm | 8.38e-10 | 315 |
mesoderm-derived structure | 8.38e-10 | 315 |
presumptive mesoderm | 8.38e-10 | 315 |
blood | 4.04e-09 | 15 |
haemolymphatic fluid | 4.04e-09 | 15 |
organism substance | 4.04e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.64e-10 | 31 |
leukemia | 4.39e-09 | 39 |
hematologic cancer | 4.67e-07 | 51 |
immune system cancer | 4.67e-07 | 51 |