FFCP PHASE1:Hg19::chr13:103249302..103249321,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12016 | |||
|TSSclassifier=strong | |||
|UniProt=P29144 | |||
|association_with_transcript=16bp_to_NM_003291,uc001vpi.3_5end | |||
|cluster_id=chr13:103249302..103249321,+ | |||
|coexpression_cluster_id=C1115 | |||
|description=CAGE_peak_2_at_TPP2_5end | |||
|id=chr13:103249302..103249321,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.91e-21!53;CL:0000051!9.91e-21!53;CL:0000838!2.94e-20!52;CL:0000037!4.34e-13!172;CL:0000566!4.34e-13!172;CL:0000791!1.20e-11!18;CL:0000789!1.20e-11!18;CL:0002420!1.20e-11!18;CL:0002419!1.20e-11!18;CL:0000790!1.20e-11!18;CL:0000988!3.46e-11!182;CL:0002032!6.98e-11!165;CL:0000837!6.98e-11!165;CL:0000084!1.23e-10!25;CL:0000827!1.23e-10!25;CL:0000945!3.41e-09!24;CL:0000826!3.41e-09!24;CL:0000625!3.46e-08!11;CL:0000738!1.54e-07!140;CL:0000236!4.59e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.09e-11;18!CL:0000789;1.09e-11;18!CL:0002419;1.09e-11;18!CL:0000542;1.12e-11;53!CL:0000084;1.05e-10;25!CL:0000945;2.68e-09;24!CL:0000625;2.49e-08;11!CL:0000236;6.98e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.21e-20,53;CL:0000051,1.21e-20,53;CL:0000838,3.59e-20,52;CL:0000037,3.61e-14,168;CL:0000988,1.41e-12,177;CL:0002032,7.39e-12,161;CL:0000837,7.39e-12,161;CL:0000791,1.10e-11,18;CL:0000789,1.10e-11,18;CL:0002420,1.10e-11,18;CL:0002419,1.10e-11,18;CL:0000790,1.10e-11,18;CL:0000084,1.62e-10,25;CL:0000827,1.62e-10,25;CL:0000945,3.20e-09,24;CL:0000826,3.20e-09,24;CL:0000738,2.29e-08,136;CL:0000625,3.27e-08,11;CL:0000236,4.38e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-11;18!CL:0000051;1.12e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!5.92e-10!51;DOID:0060083!5.92e-10!51;DOID:1240!2.10e-09!39;DOID:8692!3.60e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.22e-08;39!DOID:8692;1.04e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.02e-10,51;DOID:0060083,7.02e-10,51;DOID:1240,1.97e-09,39;DOID:8692,3.41e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.88e-10!115;UBERON:0000073!3.52e-08!94;UBERON:0001016!3.52e-08!94;UBERON:0001017!5.49e-08!82;UBERON:0005743!1.87e-07!86;UBERON:0000955!2.04e-07!69;UBERON:0006238!2.04e-07!69;UBERON:0001049!3.71e-07!57;UBERON:0005068!3.71e-07!57;UBERON:0006241!3.71e-07!57;UBERON:0007135!3.71e-07!57;UBERON:0003080!3.92e-07!42;UBERON:0002780!4.69e-07!41;UBERON:0001890!4.69e-07!41;UBERON:0006240!4.69e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.35e-10,114;UBERON:0001016,1.60e-08,89;UBERON:0001017,8.55e-08,81;UBERON:0000955,3.22e-07,68;UBERON:0006238,3.22e-07,68;UBERON:0002780,4.48e-07,41;UBERON:0001890,4.48e-07,41;UBERON:0003080,4.48e-07,41;UBERON:0006240,4.48e-07,41;UBERON:0001049,5.25e-07,56;UBERON:0005068,5.25e-07,56;UBERON:0006241,5.25e-07,56;UBERON:0007135,5.25e-07,56;UBERON:0000073,7.91e-07,53;UBERON:0002616,7.91e-07,53 | |||
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| |||
|short_description=p2@TPP2 | |||
}} |
Latest revision as of 09:25, 16 September 2015
Short description: | p2@TPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPP2_5end |
Coexpression cluster: | C1115_CD4_CD34_CD8_CD19_Basophils_Peripheral_Dendritic |
Association with transcript: | 16bp_to_NM_003291, uc001vpi.3_5end |
EntrezGene: | TPP2 |
HGNC: | 12016 |
UniProt: | P29144 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.21e-20 | 53 |
common lymphoid progenitor | 1.21e-20 | 53 |
lymphoid lineage restricted progenitor cell | 3.59e-20 | 52 |
hematopoietic stem cell | 3.61e-14 | 168 |
hematopoietic cell | 1.41e-12 | 177 |
hematopoietic oligopotent progenitor cell | 7.39e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.39e-12 | 161 |
mature alpha-beta T cell | 1.10e-11 | 18 |
alpha-beta T cell | 1.10e-11 | 18 |
immature T cell | 1.10e-11 | 18 |
mature T cell | 1.10e-11 | 18 |
immature alpha-beta T cell | 1.10e-11 | 18 |
T cell | 1.62e-10 | 25 |
pro-T cell | 1.62e-10 | 25 |
lymphocyte of B lineage | 3.20e-09 | 24 |
pro-B cell | 3.20e-09 | 24 |
leukocyte | 2.29e-08 | 136 |
CD8-positive, alpha-beta T cell | 3.27e-08 | 11 |
B cell | 4.38e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.35e-10 | 114 |
nervous system | 1.60e-08 | 89 |
central nervous system | 8.55e-08 | 81 |
brain | 3.22e-07 | 68 |
future brain | 3.22e-07 | 68 |
regional part of forebrain | 4.48e-07 | 41 |
forebrain | 4.48e-07 | 41 |
anterior neural tube | 4.48e-07 | 41 |
future forebrain | 4.48e-07 | 41 |
neural tube | 5.25e-07 | 56 |
neural rod | 5.25e-07 | 56 |
future spinal cord | 5.25e-07 | 56 |
neural keel | 5.25e-07 | 56 |
regional part of nervous system | 7.91e-07 | 53 |
regional part of brain | 7.91e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.02e-10 | 51 |
immune system cancer | 7.02e-10 | 51 |
leukemia | 1.97e-09 | 39 |
myeloid leukemia | 3.41e-08 | 31 |