FFCP PHASE1:Hg19::chr20:43991887..43991894,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16162 | |||
|TSSclassifier=strong | |||
|UniProt=F8WB21 | |||
|association_with_transcript=17bp_to_ENST00000457307_5end | |||
|cluster_id=chr20:43991887..43991894,+ | |||
|description=CAGE_peak_3_at_SYS1_5end | |||
|id=chr20:43991887..43991894,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,9.19e-08,2;CL:0000008,9.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.35e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.93e-13!57;UBERON:0005068!1.93e-13!57;UBERON:0006241!1.93e-13!57;UBERON:0007135!1.93e-13!57;UBERON:0001017!4.11e-13!82;UBERON:0005743!5.00e-13!86;UBERON:0003075!5.13e-13!86;UBERON:0007284!5.13e-13!86;UBERON:0002346!6.04e-13!90;UBERON:0000073!1.30e-12!94;UBERON:0001016!1.30e-12!94;UBERON:0002616!7.36e-12!59;UBERON:0000955!9.82e-12!69;UBERON:0006238!9.82e-12!69;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0000033!3.36e-10!123;UBERON:0007023!2.38e-09!115;UBERON:0000924!4.59e-09!173;UBERON:0006601!4.59e-09!173;UBERON:0002619!5.44e-09!22;UBERON:0004121!5.84e-09!169;UBERON:0002780!2.03e-08!41;UBERON:0001890!2.03e-08!41;UBERON:0006240!2.03e-08!41;UBERON:0003080!5.75e-08!42;UBERON:0003056!5.79e-08!61;UBERON:0001869!5.87e-08!32;UBERON:0002020!7.68e-08!34;UBERON:0003528!7.68e-08!34;UBERON:0001950!8.97e-08!20;UBERON:0001893!1.29e-07!34;UBERON:0003076!1.80e-07!15;UBERON:0003057!1.80e-07!15;UBERON:0000956!4.66e-07!25;UBERON:0000203!4.66e-07!25;UBERON:0002791!4.77e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.46e-24;5!UBERON:0001950;8.79e-16;20!UBERON:0002581;1.50e-14;1!UBERON:0002902;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0002619;2.06e-14;22!UBERON:0000956;9.49e-13;25!UBERON:0000203;9.49e-13;25!UBERON:0001869;2.62e-10;32!UBERON:0002791;1.18e-09;32!UBERON:0001893;1.47e-09;34!UBERON:0003566;6.35e-08;2!UBERON:0001777;6.35e-08;2!UBERON:0002780;1.60e-07;41!UBERON:0001890;1.60e-07;41!UBERON:0003528;6.13e-07;34!UBERON:0002020;6.13e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.41e-24,5;UBERON:0001950,1.04e-15,20;UBERON:0002902,1.61e-14,1;UBERON:0009899,1.61e-14,1;UBERON:0002619,2.41e-14,22;UBERON:0002581,2.75e-14,1;UBERON:0000956,1.09e-12,25;UBERON:0000203,1.09e-12,25;UBERON:0002791,5.43e-10,32;UBERON:0001869,5.43e-10,32;UBERON:0003528,2.04e-09,34;UBERON:0002020,2.04e-09,34;UBERON:0001893,2.04e-09,34;UBERON:0002780,7.77e-08,41;UBERON:0001890,7.77e-08,41;UBERON:0003080,7.77e-08,41;UBERON:0006240,7.77e-08,41;UBERON:0003566,9.19e-08,2;UBERON:0001777,9.19e-08,2;UBERON:0003056,2.45e-07,61 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0.940364164434263,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.590129310341499,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0,0,0.715471872916026,0,1.48583000531826,0.198762407366705,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0.336672227908132,0,0.277064115484183,0,0,0,0.453728732640084,0,0,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.253991577168676,0,0,0,0,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,2.29723871668228,0,0.289562613335158,0.205476322550383,0.179060963239896,0.448340575974109,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.41254749960294,0,0.650060246036521,0,0.096670718292122,0,0,0.275673144969061,0,0,0.170453254832202,0.445160178233687,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0.354761064070598,0,0.329294892959902,0.75894634753143,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0.142283686696828,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0,0.851692475380653,0,0,0.447352215784832,0,0.19538809540204,0.556812347790485,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0,0,0.276283915531148,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,0.927680981618513,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0.774054819518572,0.591095237907095,0.219385397153973,0.21787692703798,0,0.230850775511391,0.113942055847001,0.46112780877612,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0.530745387020035,0.611030144933625,0.296521128680622,0,0,0.202203398942031,0,0.234264445725339,0,0.391329237864179,0.242780379534093,0.394584402849391,0,1.22429104652196,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0.693373365065693,0.173559738335131,0.195984794828755,0.34823682632161,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0.0882561266915003,0.677942222341597,0.137041924646751,0.19871461170299,0.949661939338181,0,0.0801588202515337,0.426905989478705,0,0.144090417154106,0,1.71594997861965,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0.223171457441873,0.268733889946905,0,0,0.157566364614447,0,0.0674035438541849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| |||
|short_description=p3@SYS1 | |||
}} |
Latest revision as of 11:19, 16 September 2015
Short description: | p3@SYS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000457307_5end |
EntrezGene: | SYS1 |
HGNC: | 16162 |
UniProt: | F8WB21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 9.19e-08 | 2 |
migratory cranial neural crest cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.41e-24 | 5 |
neocortex | 1.04e-15 | 20 |
occipital pole | 1.61e-14 | 1 |
pole of cerebral hemisphere | 1.61e-14 | 1 |
regional part of cerebral cortex | 2.41e-14 | 22 |
postcentral gyrus | 2.75e-14 | 1 |
cerebral cortex | 1.09e-12 | 25 |
pallium | 1.09e-12 | 25 |
regional part of telencephalon | 5.43e-10 | 32 |
cerebral hemisphere | 5.43e-10 | 32 |
brain grey matter | 2.04e-09 | 34 |
gray matter | 2.04e-09 | 34 |
telencephalon | 2.04e-09 | 34 |
regional part of forebrain | 7.77e-08 | 41 |
forebrain | 7.77e-08 | 41 |
anterior neural tube | 7.77e-08 | 41 |
future forebrain | 7.77e-08 | 41 |
head connective tissue | 9.19e-08 | 2 |
substantia propria of cornea | 9.19e-08 | 2 |
pre-chordal neural plate | 2.45e-07 | 61 |