FFCP PHASE1:Hg19::chr10:118719743..118719755,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:118719743..118719755,-
|short_description=p13@KIAA1598
|description=CAGE_peak_13_at_KIAA1598_5end
|association_with_transcript=86bp_to_ENST00000490615_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000490615_5end | |||
|cluster_id=chr10:118719743..118719755,- | |||
|coexpression_cluster_id=C2983 | |||
|description=CAGE_peak_13_at_KIAA1598_5end | |||
|id=chr10:118719743..118719755,- | |||
|ontology_enrichment_celltype=CL:0000235!4.95e-10!10;CL:0000148!2.88e-08!10;CL:0000541!2.88e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.69e-22;10!CL:0000235;7.85e-17;6!CL:0000147;6.47e-16;14!CL:0000710;5.74e-11;20!CL:0000840;1.43e-09;5!CL:0002567;2.38e-09;3!CL:0000075;5.73e-08;27!CL:0002566;1.03e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.67e-22,10;CL:0000541,1.67e-22,10;CL:0000235,6.82e-17,6;CL:0000147,6.40e-16,14;CL:0000710,5.70e-11,20;CL:0000840,1.33e-09,5;CL:0001029,1.33e-09,5;CL:0002567,2.33e-09,3;CL:0000075,5.70e-08,27;CL:0002566,1.03e-07,1;CL:0000133,7.07e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.84e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.85e-14,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001954;8.45e-13;2!UBERON:0005162;8.45e-13;2!UBERON:0000122;8.45e-13;2!UBERON:0003022;8.45e-13;2!UBERON:0002421;8.45e-13;2!UBERON:0002600;8.45e-13;2!UBERON:0002336;3.10e-07;1!UBERON:0002038;3.10e-07;1!UBERON:0000941;3.10e-07;1!UBERON:0001785;3.10e-07;1!UBERON:0002464;3.10e-07;1!UBERON:0004904;3.10e-07;1!UBERON:0011215;3.10e-07;1!UBERON:0001018;3.10e-07;1!UBERON:0001021;3.10e-07;1!UBERON:0009661;3.10e-07;1!UBERON:0002950;3.10e-07;1!UBERON:0002473;3.10e-07;1!UBERON:0005340;3.10e-07;1!UBERON:0003544;3.10e-07;1!UBERON:0005970;3.10e-07;1!UBERON:0002316;3.10e-07;1!UBERON:0001020;3.10e-07;1!UBERON:0001891;3.10e-07;1!UBERON:0002437;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.96e-13,2;UBERON:0003022,7.96e-13,2;UBERON:0002421,7.96e-13,2;UBERON:0002600,7.96e-13,2;UBERON:0005162,1.14e-12,2;UBERON:0000122,1.14e-12,2;UBERON:0002038,2.07e-07,1;UBERON:0009661,2.07e-07,1;UBERON:0002950,2.07e-07,1;UBERON:0001891,2.07e-07,1;UBERON:0009616,2.07e-07,1;UBERON:0010286,2.07e-07,1;UBERON:0000941,3.01e-07,1;UBERON:0001785,3.01e-07,1;UBERON:0002464,3.01e-07,1;UBERON:0004904,3.01e-07,1;UBERON:0001021,3.01e-07,1;UBERON:0003902,3.01e-07,1;UBERON:0005425,3.01e-07,1;UBERON:0002336,4.34e-07,1;UBERON:0011215,4.34e-07,1;UBERON:0001018,4.34e-07,1;UBERON:0002473,4.34e-07,1;UBERON:0005340,4.34e-07,1;UBERON:0003544,4.34e-07,1;UBERON:0005970,4.34e-07,1;UBERON:0002316,4.34e-07,1;UBERON:0001020,4.34e-07,1;UBERON:0002437,4.34e-07,1;UBERON:0001016,4.96e-07,89 | |||
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| ||
|short_description=p13@KIAA1598 | |||
}} | }} |
Latest revision as of 14:53, 16 September 2015
Short description: | p13@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA1598_5end |
Coexpression cluster: | C2983_Melanocyte_astrocytoma_melanoma_Macrophage_Monocytederived_Dendritic_substantia |
Association with transcript: | 86bp_to_ENST00000490615_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-22 | 10 |
melanoblast | 1.67e-22 | 10 |
macrophage | 6.82e-17 | 6 |
pigment cell | 6.40e-16 | 14 |
neurecto-epithelial cell | 5.70e-11 | 20 |
immature conventional dendritic cell | 1.33e-09 | 5 |
common dendritic progenitor | 1.33e-09 | 5 |
light melanocyte | 2.33e-09 | 3 |
columnar/cuboidal epithelial cell | 5.70e-08 | 27 |
dark melanocyte | 1.03e-07 | 1 |
neurectodermal cell | 7.07e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.96e-13 | 2 |
lobe parts of cerebral cortex | 7.96e-13 | 2 |
hippocampal formation | 7.96e-13 | 2 |
limbic lobe | 7.96e-13 | 2 |
multi cell component structure | 1.14e-12 | 2 |
neuron projection bundle | 1.14e-12 | 2 |
substantia nigra | 2.07e-07 | 1 |
midbrain nucleus | 2.07e-07 | 1 |
regional part of midbrain | 2.07e-07 | 1 |
midbrain | 2.07e-07 | 1 |
presumptive midbrain | 2.07e-07 | 1 |
midbrain neural tube | 2.07e-07 | 1 |
cranial nerve II | 3.01e-07 | 1 |
cranial nerve | 3.01e-07 | 1 |
nerve trunk | 3.01e-07 | 1 |
nerve connecting eye with brain | 3.01e-07 | 1 |
nerve | 3.01e-07 | 1 |
retinal neural layer | 3.01e-07 | 1 |
presumptive neural retina | 3.01e-07 | 1 |
corpus callosum | 4.34e-07 | 1 |
central nervous system cell part cluster | 4.34e-07 | 1 |
axon tract | 4.34e-07 | 1 |
intercerebral commissure | 4.34e-07 | 1 |
dorsal telencephalic commissure | 4.34e-07 | 1 |
brain white matter | 4.34e-07 | 1 |
brain commissure | 4.34e-07 | 1 |
white matter | 4.34e-07 | 1 |
nervous system commissure | 4.34e-07 | 1 |
cerebral hemisphere white matter | 4.34e-07 | 1 |
nervous system | 4.96e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.85e-14 | 2 |