FFCP PHASE1:Hg19::chr14:94847300..94847395,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:94847300..94847395,-
|short_description=p7@SERPINA1
|description=CAGE_peak_7_at_SERPINA1_5end
|association_with_transcript=-49bp_to_X02920_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-49bp_to_X02920_5end | |||
|cluster_id=chr14:94847300..94847395,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_SERPINA1_5end | |||
|id=chr14:94847300..94847395,- | |||
|ontology_enrichment_celltype=CL:0002057!7.18e-42!42;CL:0000766!1.28e-38!76;CL:0000860!7.31e-38!45;CL:0002194!1.78e-37!63;CL:0000576!1.78e-37!63;CL:0000040!1.78e-37!63;CL:0000559!1.78e-37!63;CL:0002009!1.10e-35!65;CL:0000839!1.13e-31!70;CL:0000557!6.07e-31!71;CL:0000763!7.27e-21!112;CL:0000049!7.27e-21!112;CL:0002087!6.31e-20!119;CL:0000738!1.03e-19!140;CL:0002031!1.08e-15!124;CL:0000037!4.90e-13!172;CL:0000566!4.90e-13!172;CL:0002032!1.64e-12!165;CL:0000837!1.64e-12!165;CL:0000988!3.75e-11!182;CL:0002393!4.16e-10!9;CL:0002397!4.16e-10!9;CL:0000181!6.74e-07!12;CL:0000417!6.74e-07!12;CL:0000668!6.74e-07!12;CL:0000414!6.74e-07!12;CL:0000412!6.74e-07!12;CL:0000182!6.74e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.42e-56;33!CL:0002057;5.42e-56;33!CL:0000473;5.42e-49;39!CL:0000234;5.42e-49;39!CL:0000576;1.90e-41;48!CL:0000766;1.62e-33;69!CL:0000763;3.02e-14;100!CL:0002393;2.58e-12;6!CL:0002397;2.58e-12;6!CL:0002087;1.39e-09;104!CL:0000094;2.95e-09;8!CL:0000182;7.89e-09;12!CL:0000738;2.20e-08;136!CL:0000775;4.93e-08;3!CL:0000875;2.95e-07;3!CL:0002396;2.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.05e-81,48;CL:0000234,1.05e-81,48;CL:0000860,6.15e-79,42;CL:0002057,6.15e-79,42;CL:0000766,4.82e-65,72;CL:0002194,1.62e-62,59;CL:0000576,1.62e-62,59;CL:0000040,1.62e-62,59;CL:0000559,1.62e-62,59;CL:0002009,4.81e-60,61;CL:0000839,1.64e-54,66;CL:0000557,1.67e-53,67;CL:0000763,1.85e-38,108;CL:0000049,1.85e-38,108;CL:0000738,6.93e-32,136;CL:0002087,3.10e-30,115;CL:0002031,1.32e-25,120;CL:0000037,6.32e-23,168;CL:0002032,2.85e-22,161;CL:0000837,2.85e-22,161;CL:0000988,5.29e-21,177;CL:0002393,7.13e-18,9;CL:0002397,7.13e-18,9;CL:0000094,3.26e-09,8;CL:0000182,8.19e-09,12;CL:0000134,4.53e-08,354;CL:0000775,4.99e-08,3;CL:0002320,1.25e-07,361;CL:0000875,3.35e-07,3;CL:0002396,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.53e-56;42!CL:0000049;3.41e-12;108!UBERON:0004161;2.20e-09;11!UBERON:0009497;9.65e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.08e-34!102;UBERON:0003061!5.08e-34!102;UBERON:0002193!1.04e-30!112;UBERON:0002405!3.96e-30!115;UBERON:0002371!2.93e-27!80;UBERON:0001474!7.89e-25!86;UBERON:0004765!1.11e-20!101;UBERON:0001434!1.11e-20!101;UBERON:0000062!4.34e-09!511;UBERON:0009497!5.59e-09!25;UBERON:0000015!5.59e-09!25;UBERON:0002423!5.59e-09!25;UBERON:0006235!5.59e-09!25;UBERON:0004161!5.59e-09!25;UBERON:0000926!1.27e-08!448;UBERON:0004120!1.27e-08!448;UBERON:0006603!1.27e-08!448;UBERON:0000178!2.78e-08!15;UBERON:0000179!2.78e-08!15;UBERON:0000463!2.78e-08!15;UBERON:0003081!2.95e-08!216;UBERON:0009854!6.85e-08!23;UBERON:0008835!2.40e-07!22;UBERON:0003894!2.40e-07!22;UBERON:0003929!3.16e-07!54;UBERON:0002204!6.12e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.51e-11;15!UBERON:0000179;4.51e-11;15!UBERON:0000463;4.51e-11;15!UBERON:0002423;9.43e-09;25!UBERON:0002107;1.41e-08;19!UBERON:0006925;1.41e-08;19!UBERON:0002108;7.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.52e-55,98;UBERON:0003061,2.52e-55,98;UBERON:0002193,1.02e-48,108;UBERON:0002371,1.29e-45,76;UBERON:0001474,2.56e-41,82;UBERON:0002405,2.93e-38,93;UBERON:0004765,1.77e-36,90;UBERON:0001434,1.61e-31,100;UBERON:0003081,1.67e-20,203;UBERON:0002204,1.06e-14,167;UBERON:0000178,4.46e-11,15;UBERON:0000179,4.46e-11,15;UBERON:0000463,4.46e-11,15;UBERON:0000926,1.33e-09,315;UBERON:0004120,1.33e-09,315;UBERON:0006603,1.33e-09,315;UBERON:0009497,9.51e-09,25;UBERON:0000015,9.51e-09,25;UBERON:0002423,9.51e-09,25;UBERON:0006235,9.51e-09,25;UBERON:0004161,9.51e-09,25;UBERON:0008835,1.35e-08,22;UBERON:0003894,1.35e-08,22;UBERON:0002107,1.45e-08,19;UBERON:0006925,1.45e-08,19;UBERON:0008836,1.45e-08,19;UBERON:0009854,4.03e-08,23;UBERON:0007499,2.74e-07,25;UBERON:0002384,4.89e-07,371;UBERON:0009856,6.38e-07,26;UBERON:0002108,6.56e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0.383829398097213,2.16742572642506,0,0,0.369754010166788,0.0774672005803016,0,0,1.66198622559563,5.61524452916397,4.12320654360118,0.447830948479849,0.647787332037959,0.77272670290256,3.05336301437086,3.40088349319928,3.39617685662943,7.43772918098191,2.87817521615278,6.19412741790207,5.75384784644301,5.12321413058201,8.0403958162119,7.58440497620561,2.5819387343353,8.12558919566051,5.27078550719293,3.27487380069415,6.29225756446237,5.20342617030534,2.88836124368484,7.03270838378945,8.2462825046679,4.78712778291916,8.95071976118658,10.447532590629,9.64554881974938,4.9825779919646,4.52247597462138,8.86520961314342,4.56096573880745,3.02699751316684,3.68277635987565,13.9243450473989,9.92899845666126,7.44115049877652,4.40283155567589,3.81917345898083,4.35512989240368,4.8217676009124,5.41524213108372,9.34908382835724,4.01861138282195,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947109008176067,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,3.40644409211845,0,0,0,0.523916301990851,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,589.410911921514,838.351615826015,313.118650541144,0,11.1919479074233,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0.936017060556951,3.26988557035202,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,8.43335757932127,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,23.9682247663098,59.832291840805,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,6.25571182373989,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,7.6141453242722,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,33.4883287855097,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,40.8584095371222,0,0,0,0,2.53723804616085,0.764637207142375,2.27858874869665,1.19115887728894,4.11362273086194,3.8908398671563,2.70015718619057,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,13.8435254350478,0,0,0.552567831062295,0.503865495708552,0,0,0,0.629078458031288,0,0,0.295930216910801,2.3948309234694,0,4.84666373047609,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0.424059214301822,0,0,1.06149077404007,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,1.97292201424695,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0.520679215005393,0,0,2.09672001890436,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,3.20179492109029,0.599428828746391,0,0,18.7038547669541,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0.223171457441873,0,0,1.16495949527454,41.8338698051358,49.2846833119375,42.0598113650114,0.492137407573744,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,9.14146204670699,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,332.820122682925,349.818186728264,0,0,0.342173675768659,0,5.55294545352012,0.314408610199332,3.72815149812476,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,1.6468607378872,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,1.65085738669511,0.346576998451015,0,0,0,0,0.60511520611056,3.90757005616546,0,0,1.92212912082159,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,6.77419280305486,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,3.39566295674957,13.3321331907414,0.470317296361523,0,0,0,0,0,0,1.12780701575824,1.09578409555081,0,0,0.352894871715692,0.160482733378337,0.7303363882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| ||
|short_description=p7@SERPINA1 | |||
}} | }} |
Latest revision as of 17:56, 16 September 2015
Short description: | p7@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -49bp_to_X02920_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.52e-55 | 98 |
blood island | 2.52e-55 | 98 |
hemolymphoid system | 1.02e-48 | 108 |
bone marrow | 1.29e-45 | 76 |
bone element | 2.56e-41 | 82 |
immune system | 2.93e-38 | 93 |
skeletal element | 1.77e-36 | 90 |
skeletal system | 1.61e-31 | 100 |
lateral plate mesoderm | 1.67e-20 | 203 |
musculoskeletal system | 1.06e-14 | 167 |
blood | 4.46e-11 | 15 |
haemolymphatic fluid | 4.46e-11 | 15 |
organism substance | 4.46e-11 | 15 |
mesoderm | 1.33e-09 | 315 |
mesoderm-derived structure | 1.33e-09 | 315 |
presumptive mesoderm | 1.33e-09 | 315 |
epithelium of foregut-midgut junction | 9.51e-09 | 25 |
anatomical boundary | 9.51e-09 | 25 |
hepatobiliary system | 9.51e-09 | 25 |
foregut-midgut junction | 9.51e-09 | 25 |
septum transversum | 9.51e-09 | 25 |
hepatic diverticulum | 1.35e-08 | 22 |
liver primordium | 1.35e-08 | 22 |
liver | 1.45e-08 | 19 |
digestive gland | 1.45e-08 | 19 |
liver bud | 1.45e-08 | 19 |
digestive tract diverticulum | 4.03e-08 | 23 |
epithelial sac | 2.74e-07 | 25 |
connective tissue | 4.89e-07 | 371 |
sac | 6.38e-07 | 26 |
small intestine | 6.56e-07 | 4 |