FFCP PHASE1:Hg19::chr1:147245445..147245461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2702 | |EntrezGene=2702 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4279 | |HGNC=4279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000430508_5end | |association_with_transcript=0bp_to_ENST00000430508_5end | ||
|cluster_id=chr1:147245445..147245461,- | |||
|coexpression_cluster_id=C2521 | |coexpression_cluster_id=C2521 | ||
|description=CAGE_peak_2_at_GJA5_5end | |description=CAGE_peak_2_at_GJA5_5end | ||
|id=chr1:147245445..147245461,- | |id=chr1:147245445..147245461,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000413;1.63e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,1.99e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.42e-10;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-58!115;UBERON:0001049!6.03e-20!57;UBERON:0005068!6.03e-20!57;UBERON:0006241!6.03e-20!57;UBERON:0007135!6.03e-20!57;UBERON:0000025!6.39e-19!194;UBERON:0004111!3.26e-18!241;UBERON:0003075!4.63e-16!86;UBERON:0007284!4.63e-16!86;UBERON:0000477!1.32e-15!286;UBERON:0002346!1.99e-15!90;UBERON:0002616!3.03e-15!59;UBERON:0003080!1.17e-14!42;UBERON:0001893!4.63e-14!34;UBERON:0002020!6.77e-14!34;UBERON:0003528!6.77e-14!34;UBERON:0002780!8.07e-14!41;UBERON:0001890!8.07e-14!41;UBERON:0006240!8.07e-14!41;UBERON:0002791!2.16e-13!33;UBERON:0001017!1.29e-12!82;UBERON:0001869!1.55e-12!32;UBERON:0005743!2.23e-12!86;UBERON:0000955!5.42e-12!69;UBERON:0006238!5.42e-12!69;UBERON:0000073!8.83e-11!94;UBERON:0001016!8.83e-11!94;UBERON:0007100!1.43e-10!27;UBERON:0003103!1.55e-10!69;UBERON:0000483!1.66e-10!309;UBERON:0000119!3.67e-10!312;UBERON:0000468!2.15e-09!659;UBERON:0004872!3.13e-09!84;UBERON:0002619!1.30e-08!22;UBERON:0001950!1.83e-08!20;UBERON:0002420!2.14e-08!9;UBERON:0007245!2.14e-08!9;UBERON:0010009!2.14e-08!9;UBERON:0010011!2.14e-08!9;UBERON:0000454!2.14e-08!9;UBERON:0003056!2.24e-08!61;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0000956!4.82e-08!25;UBERON:0000203!4.82e-08!25;UBERON:0002298!5.11e-08!8;UBERON:0000948!5.18e-08!24;UBERON:0005498!5.18e-08!24;UBERON:0004140!5.18e-08!24;UBERON:0009881!5.18e-08!24;UBERON:0004141!5.18e-08!24;UBERON:0003084!5.18e-08!24;UBERON:0007005!5.18e-08!24;UBERON:0004139!5.18e-08!24;UBERON:0004291!5.18e-08!24;UBERON:0000481!2.32e-07!347;UBERON:0009663!6.76e-07!7;UBERON:0000922!7.24e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!1.33e-58!115;UBERON:0001049!6.03e-20!57;UBERON:0005068!6.03e-20!57;UBERON:0006241!6.03e-20!57;UBERON:0007135!6.03e-20!57;UBERON:0000025!6.39e-19!194;UBERON:0004111!3.26e-18!241;UBERON:0003075!4.63e-16!86;UBERON:0007284!4.63e-16!86;UBERON:0000477!1.32e-15!286;UBERON:0002346!1.99e-15!90;UBERON:0002616!3.03e-15!59;UBERON:0003080!1.17e-14!42;UBERON:0001893!4.63e-14!34;UBERON:0002020!6.77e-14!34;UBERON:0003528!6.77e-14!34;UBERON:0002780!8.07e-14!41;UBERON:0001890!8.07e-14!41;UBERON:0006240!8.07e-14!41;UBERON:0002791!2.16e-13!33;UBERON:0001017!1.29e-12!82;UBERON:0001869!1.55e-12!32;UBERON:0005743!2.23e-12!86;UBERON:0000955!5.42e-12!69;UBERON:0006238!5.42e-12!69;UBERON:0000073!8.83e-11!94;UBERON:0001016!8.83e-11!94;UBERON:0007100!1.43e-10!27;UBERON:0003103!1.55e-10!69;UBERON:0000483!1.66e-10!309;UBERON:0000119!3.67e-10!312;UBERON:0000468!2.15e-09!659;UBERON:0004872!3.13e-09!84;UBERON:0002619!1.30e-08!22;UBERON:0001950!1.83e-08!20;UBERON:0002420!2.14e-08!9;UBERON:0007245!2.14e-08!9;UBERON:0010009!2.14e-08!9;UBERON:0010011!2.14e-08!9;UBERON:0000454!2.14e-08!9;UBERON:0003056!2.24e-08!61;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0000956!4.82e-08!25;UBERON:0000203!4.82e-08!25;UBERON:0002298!5.11e-08!8;UBERON:0000948!5.18e-08!24;UBERON:0005498!5.18e-08!24;UBERON:0004140!5.18e-08!24;UBERON:0009881!5.18e-08!24;UBERON:0004141!5.18e-08!24;UBERON:0003084!5.18e-08!24;UBERON:0007005!5.18e-08!24;UBERON:0004139!5.18e-08!24;UBERON:0004291!5.18e-08!24;UBERON:0000481!2.32e-07!347;UBERON:0009663!6.76e-07!7;UBERON:0000922!7.24e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.17e-12;114!UBERON:0007100;3.22e-10;25!UBERON:0003915;1.63e-07;9!UBERON:0004700;1.63e-07;9!UBERON:0001917;1.63e-07;9!UBERON:0003978;4.22e-07;3!UBERON:0000946;4.22e-07;3!UBERON:0000948;7.13e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.79e-45,114;UBERON:0003103,1.10e-11,68;UBERON:0007100,5.86e-11,27;UBERON:0000025,1.18e-10,192;UBERON:0010314,2.14e-10,132;UBERON:0004111,9.02e-10,240;UBERON:0004872,1.98e-08,83;UBERON:0003075,2.93e-08,82;UBERON:0007284,2.93e-08,82;UBERON:0001049,7.29e-08,56;UBERON:0005068,7.29e-08,56;UBERON:0006241,7.29e-08,56;UBERON:0007135,7.29e-08,56;UBERON:0000948,1.30e-07,24;UBERON:0005498,1.30e-07,24;UBERON:0004140,1.30e-07,24;UBERON:0009881,1.30e-07,24;UBERON:0004141,1.30e-07,24;UBERON:0003084,1.30e-07,24;UBERON:0007005,1.30e-07,24;UBERON:0004139,1.30e-07,24;UBERON:0004291,1.30e-07,24;UBERON:0002346,1.41e-07,86;UBERON:0003915,1.99e-07,9;UBERON:0004700,1.99e-07,9;UBERON:0001917,1.99e-07,9;UBERON:0003978,4.49e-07,3;UBERON:0009751,4.49e-07,3;UBERON:0000946,4.49e-07,3;UBERON:0002523,4.49e-07,3;UBERON:0005983,4.49e-07,3;UBERON:0002165,4.49e-07,3;UBERON:0002062,4.49e-07,3;UBERON:0007280,4.49e-07,3 | |||
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| ||
|short_description=p2@GJA5 | |short_description=p2@GJA5 | ||
}} | }} |
Latest revision as of 19:44, 16 September 2015
Short description: | p2@GJA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GJA5_5end |
Coexpression cluster: | C2521_Endothelial_heart_Fibroblast_large_acute_adipose_kidney |
Association with transcript: | 0bp_to_ENST00000430508_5end |
EntrezGene: | GJA5 |
HGNC: | 4279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 1.99e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.79e-45 | 114 |
compound organ | 1.10e-11 | 68 |
primary circulatory organ | 5.86e-11 | 27 |
tube | 1.18e-10 | 192 |
structure with developmental contribution from neural crest | 2.14e-10 | 132 |
anatomical conduit | 9.02e-10 | 240 |
splanchnic layer of lateral plate mesoderm | 1.98e-08 | 83 |
neural plate | 2.93e-08 | 82 |
presumptive neural plate | 2.93e-08 | 82 |
neural tube | 7.29e-08 | 56 |
neural rod | 7.29e-08 | 56 |
future spinal cord | 7.29e-08 | 56 |
neural keel | 7.29e-08 | 56 |
heart | 1.30e-07 | 24 |
primitive heart tube | 1.30e-07 | 24 |
primary heart field | 1.30e-07 | 24 |
anterior lateral plate mesoderm | 1.30e-07 | 24 |
heart tube | 1.30e-07 | 24 |
heart primordium | 1.30e-07 | 24 |
cardiac mesoderm | 1.30e-07 | 24 |
cardiogenic plate | 1.30e-07 | 24 |
heart rudiment | 1.30e-07 | 24 |
neurectoderm | 1.41e-07 | 86 |
endothelial tube | 1.99e-07 | 9 |
arterial system endothelium | 1.99e-07 | 9 |
endothelium of artery | 1.99e-07 | 9 |
valve | 4.49e-07 | 3 |
cardiac mesenchyme | 4.49e-07 | 3 |
cardial valve | 4.49e-07 | 3 |
tunica intima | 4.49e-07 | 3 |
heart layer | 4.49e-07 | 3 |
endocardium | 4.49e-07 | 3 |
endocardial cushion | 4.49e-07 | 3 |
presumptive endocardium | 4.49e-07 | 3 |