FFCP PHASE1:Hg19::chr8:143833918..143833960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137797 | |EntrezGene=137797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25215 | |HGNC=25215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXB3,F1T0L0 | |UniProt=Q6UXB3,F1T0L0 | ||
|association_with_transcript=0bp_to_ENST00000359228,NM_205545,uc003ywz.2_5end | |association_with_transcript=0bp_to_ENST00000359228,NM_205545,uc003ywz.2_5end | ||
|cluster_id=chr8:143833918..143833960,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_LYPD2_5end | |description=CAGE_peak_1_at_LYPD2_5end | ||
|id=chr8:143833918..143833960,- | |id=chr8:143833918..143833960,- | ||
|ontology_enrichment_celltype=CL:0002057!1.21e-30!42;CL:0000860!1.73e-30!45;CL:0002009!2.19e-17!65;CL:0002194!2.35e-17!63;CL:0000576!2.35e-17!63;CL:0000040!2.35e-17!63;CL:0000559!2.35e-17!63;CL:0000766!1.59e-15!76;CL:0000557!7.46e-15!71;CL:0000839!2.16e-14!70;CL:0002087!5.41e-09!119;CL:0000738!2.19e-08!140;CL:0002076!3.04e-08!43;CL:0000223!3.35e-07!59;CL:0000763!3.41e-07!112;CL:0000049!3.41e-07!112;CL:0002031!7.85e-07!124;CL:0002393!8.99e-07!9;CL:0002397!8.99e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.21e-30!42;CL:0000860!1.73e-30!45;CL:0002009!2.19e-17!65;CL:0002194!2.35e-17!63;CL:0000576!2.35e-17!63;CL:0000040!2.35e-17!63;CL:0000559!2.35e-17!63;CL:0000766!1.59e-15!76;CL:0000557!7.46e-15!71;CL:0000839!2.16e-14!70;CL:0002087!5.41e-09!119;CL:0000738!2.19e-08!140;CL:0002076!3.04e-08!43;CL:0000223!3.35e-07!59;CL:0000763!3.41e-07!112;CL:0000049!3.41e-07!112;CL:0002031!7.85e-07!124;CL:0002393!8.99e-07!9;CL:0002397!8.99e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.43e-30;33!CL:0002057;8.43e-30;33!CL:0000576;3.37e-21;48!CL:0000473;1.08e-20;39!CL:0000234;1.08e-20;39!CL:0000766;3.16e-12;69!CL:0000875;8.92e-08;3!CL:0002396;8.92e-08;3!CL:0000767;5.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.40e-40,42;CL:0002057,4.40e-40,42;CL:0000473,8.64e-34,48;CL:0000234,8.64e-34,48;CL:0002194,4.99e-25,59;CL:0000576,4.99e-25,59;CL:0000040,4.99e-25,59;CL:0000559,4.99e-25,59;CL:0002009,6.64e-24,61;CL:0000766,1.18e-23,72;CL:0000839,2.14e-21,66;CL:0000557,6.13e-21,67;CL:0000763,1.67e-12,108;CL:0000049,1.67e-12,108;CL:0002087,4.60e-11,115;CL:0000738,2.73e-10,136;CL:0002393,1.99e-08,9;CL:0002397,1.99e-08,9;CL:0002031,6.17e-08,120;CL:0000875,8.93e-08,3;CL:0002396,8.93e-08,3;CL:0000767,5.40e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-19!102;UBERON:0003061!3.58e-19!102;UBERON:0002193!5.73e-17!112;UBERON:0002371!7.89e-12!80;UBERON:0001474!3.33e-10!86;UBERON:0000178!1.13e-09!15;UBERON:0000179!1.13e-09!15;UBERON:0000463!1.13e-09!15;UBERON:0002405!2.03e-09!115;UBERON:0004765!1.38e-07!101;UBERON:0001434!1.38e-07!101;UBERON:0007023!1.69e-07!115;UBERON:0000926!6.05e-07!448;UBERON:0004120!6.05e-07!448;UBERON:0006603!6.05e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.48e-13;15!UBERON:0000179;5.48e-13;15!UBERON:0000463;5.48e-13;15!UBERON:0004921;4.95e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.19e-27,98;UBERON:0003061,1.19e-27,98;UBERON:0002193,2.02e-25,108;UBERON:0002371,2.20e-17,76;UBERON:0002405,3.93e-16,93;UBERON:0001474,1.85e-15,82;UBERON:0004765,2.62e-13,90;UBERON:0000178,5.02e-13,15;UBERON:0000179,5.02e-13,15;UBERON:0000463,5.02e-13,15;UBERON:0003081,1.72e-11,203;UBERON:0001434,3.97e-11,100;UBERON:0000922,1.20e-07,592;UBERON:0002050,1.45e-07,564;UBERON:0000923,2.76e-07,560;UBERON:0010316,2.76e-07,560;UBERON:0005291,2.76e-07,560;UBERON:0006598,2.76e-07,560;UBERON:0010317,2.76e-07,560;UBERON:0002532,2.76e-07,560;UBERON:0005423,3.81e-07,581;UBERON:0000974,7.39e-07,10;UBERON:0006562,9.69e-07,11 | |||
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| ||
|short_description=p1@LYPD2 | |short_description=p1@LYPD2 | ||
}} | }} |
Latest revision as of 21:20, 16 September 2015
Short description: | p1@LYPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYPD2_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000359228, NM_205545, uc003ywz.2_5end |
EntrezGene: | LYPD2 |
HGNC: | 25215 |
UniProt: | Q6UXB3F1T0L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.40e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.40e-40 | 42 |
defensive cell | 8.64e-34 | 48 |
phagocyte | 8.64e-34 | 48 |
monopoietic cell | 4.99e-25 | 59 |
monocyte | 4.99e-25 | 59 |
monoblast | 4.99e-25 | 59 |
promonocyte | 4.99e-25 | 59 |
macrophage dendritic cell progenitor | 6.64e-24 | 61 |
myeloid leukocyte | 1.18e-23 | 72 |
myeloid lineage restricted progenitor cell | 2.14e-21 | 66 |
granulocyte monocyte progenitor cell | 6.13e-21 | 67 |
myeloid cell | 1.67e-12 | 108 |
common myeloid progenitor | 1.67e-12 | 108 |
nongranular leukocyte | 4.60e-11 | 115 |
leukocyte | 2.73e-10 | 136 |
intermediate monocyte | 1.99e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.99e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 6.17e-08 | 120 |
non-classical monocyte | 8.93e-08 | 3 |
CD14-low, CD16-positive monocyte | 8.93e-08 | 3 |
basophil | 5.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.19e-27 | 98 |
blood island | 1.19e-27 | 98 |
hemolymphoid system | 2.02e-25 | 108 |
bone marrow | 2.20e-17 | 76 |
immune system | 3.93e-16 | 93 |
bone element | 1.85e-15 | 82 |
skeletal element | 2.62e-13 | 90 |
blood | 5.02e-13 | 15 |
haemolymphatic fluid | 5.02e-13 | 15 |
organism substance | 5.02e-13 | 15 |
lateral plate mesoderm | 1.72e-11 | 203 |
skeletal system | 3.97e-11 | 100 |
embryo | 1.20e-07 | 592 |
embryonic structure | 1.45e-07 | 564 |
germ layer | 2.76e-07 | 560 |
germ layer / neural crest | 2.76e-07 | 560 |
embryonic tissue | 2.76e-07 | 560 |
presumptive structure | 2.76e-07 | 560 |
germ layer / neural crest derived structure | 2.76e-07 | 560 |
epiblast (generic) | 2.76e-07 | 560 |
developing anatomical structure | 3.81e-07 | 581 |
neck | 7.39e-07 | 10 |
pharynx | 9.69e-07 | 11 |