FFCP PHASE1:Hg19::chr13:31735993..31736009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10808 | |EntrezGene=10808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16969 | |HGNC=16969 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3D7 | |UniProt=F2Z3D7 | ||
|association_with_transcript=22bp_to_ENST00000380363_5end | |association_with_transcript=22bp_to_ENST00000380363_5end | ||
|cluster_id=chr13:31735993..31736009,- | |||
|description=CAGE_peak_3_at_HSPH1_5end | |description=CAGE_peak_3_at_HSPH1_5end | ||
|id=chr13:31735993..31736009,- | |id=chr13:31735993..31736009,- | ||
|ontology_enrichment_celltype=CL:0000542!1.51e-07!53;CL:0000051!1.51e-07!53;CL:0000738!2.17e-07!140;CL:0000838!3.72e-07!52;CL:0002031!9.13e-07!124 | |ontology_enrichment_celltype=CL:0000542!1.51e-07!53;CL:0000051!1.51e-07!53;CL:0000738!2.17e-07!140;CL:0000838!3.72e-07!52;CL:0002031!9.13e-07!124 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.51e-07,53;CL:0000051,1.51e-07,53;CL:0000838,3.71e-07,52;CL:0000738,4.35e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.07e-08!239;DOID:162!9.75e-08!235 | |ontology_enrichment_disease=DOID:14566!6.07e-08!239;DOID:162!9.75e-08!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.23e-08,239;DOID:162,1.00e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003080!7.20e-11!42;UBERON:0001869!7.87e-11!32;UBERON:0002780!1.64e-10!41;UBERON:0001890!1.64e-10!41;UBERON:0006240!1.64e-10!41;UBERON:0002020!1.67e-10!34;UBERON:0003528!1.67e-10!34;UBERON:0001893!4.38e-10!34;UBERON:0002791!1.39e-09!33;UBERON:0002619!3.77e-08!22;UBERON:0001950!5.90e-08!20;UBERON:0000956!1.21e-07!25;UBERON:0000203!1.21e-07!25;UBERON:0001049!2.72e-07!57;UBERON:0005068!2.72e-07!57;UBERON:0006241!2.72e-07!57;UBERON:0007135!2.72e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.03e-09;32!UBERON:0002791;2.02e-09;32!UBERON:0003528;3.13e-09;34!UBERON:0002020;3.13e-09;34!UBERON:0001893;6.76e-09;34!UBERON:0002619;5.55e-08;22!UBERON:0001950;8.46e-08;20!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0000956;1.51e-07;25!UBERON:0000203;1.51e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.84e-11,32;UBERON:0002780,1.63e-10,41;UBERON:0001890,1.63e-10,41;UBERON:0003080,1.63e-10,41;UBERON:0006240,1.63e-10,41;UBERON:0003528,1.66e-10,34;UBERON:0002020,1.66e-10,34;UBERON:0002791,2.50e-10,32;UBERON:0001893,4.37e-10,34;UBERON:0002619,3.75e-08,22;UBERON:0001950,5.88e-08,20;UBERON:0000956,1.21e-07,25;UBERON:0000203,1.21e-07,25;UBERON:0000073,3.09e-07,53;UBERON:0002616,3.09e-07,53;UBERON:0001049,5.73e-07,56;UBERON:0005068,5.73e-07,56;UBERON:0006241,5.73e-07,56;UBERON:0007135,5.73e-07,56 | |||
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| ||
|short_description=p3@HSPH1 | |short_description=p3@HSPH1 | ||
}} | }} |
Latest revision as of 03:07, 17 September 2015
Short description: | p3@HSPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HSPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000380363_5end |
EntrezGene: | HSPH1 |
HGNC: | 16969 |
UniProt: | F2Z3D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.51e-07 | 53 |
common lymphoid progenitor | 1.51e-07 | 53 |
lymphoid lineage restricted progenitor cell | 3.71e-07 | 52 |
leukocyte | 4.35e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 7.84e-11 | 32 |
regional part of forebrain | 1.63e-10 | 41 |
forebrain | 1.63e-10 | 41 |
anterior neural tube | 1.63e-10 | 41 |
future forebrain | 1.63e-10 | 41 |
brain grey matter | 1.66e-10 | 34 |
gray matter | 1.66e-10 | 34 |
regional part of telencephalon | 2.50e-10 | 32 |
telencephalon | 4.37e-10 | 34 |
regional part of cerebral cortex | 3.75e-08 | 22 |
neocortex | 5.88e-08 | 20 |
cerebral cortex | 1.21e-07 | 25 |
pallium | 1.21e-07 | 25 |
regional part of nervous system | 3.09e-07 | 53 |
regional part of brain | 3.09e-07 | 53 |
neural tube | 5.73e-07 | 56 |
neural rod | 5.73e-07 | 56 |
future spinal cord | 5.73e-07 | 56 |
neural keel | 5.73e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.23e-08 | 239 |
cancer | 1.00e-07 | 235 |