FFCP PHASE1:Hg19::chr1:152691067..152691070,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:152691067..152691070,+
|short_description=p1@C1orf68
|description=CAGE_peak_1_at_C1orf68_5end
|association_with_transcript=-11bp_to_ENST00000362017_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100129271 | |EntrezGene=100129271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29468 | |HGNC=29468 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T750 | |UniProt=Q5T750 | ||
|association_with_transcript=-11bp_to_ENST00000362017_5end | |||
|cluster_id=chr1:152691067..152691070,+ | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_C1orf68_5end | |||
|id=chr1:152691067..152691070,+ | |||
|ontology_enrichment_celltype=CL:0002159!3.17e-23!13;CL:0002621!3.46e-16!3;CL:0000622!5.20e-16!5;CL:0002166!5.43e-16!3;CL:0000362!4.12e-15!8;CL:0000154!2.31e-13!6;CL:0002076!1.64e-11!43;CL:0000244!3.23e-11!4;CL:0000731!3.23e-11!4;CL:0001014!4.96e-11!2;CL:0001016!4.96e-11!2;CL:0000317!8.53e-11!2;CL:1000448!8.53e-11!2;CL:0002308!8.53e-11!2;CL:0002140!8.53e-11!2;CL:0000312!2.38e-09!5;CL:0000150!6.18e-09!9;CL:0002368!7.93e-09!13;CL:0000066!1.30e-08!254;CL:0002077!2.25e-08!33;CL:0000240!7.31e-08!6;CL:0000311!7.31e-08!6;CL:0000079!7.31e-08!6;CL:0000237!7.31e-08!6;CL:0000036!7.31e-08!6;CL:0000357!7.31e-08!6;CL:0000114!7.31e-08!6;CL:0000223!8.13e-08!59;CL:0002573!1.26e-07!2;CL:0002623!1.49e-07!3;CL:0000068!3.42e-07!3;CL:0000069!3.42e-07!3;CL:0000307!3.42e-07!3;CL:0000377!3.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;8.67e-30;3!CL:0002166;1.88e-29;3!CL:0002159;4.24e-24;14!CL:0001014;7.92e-20;2!CL:0001016;7.92e-20;2!CL:0002573;1.87e-13;2!CL:0000362;4.74e-10;9!CL:0002077;6.29e-09;34!CL:0000622;1.11e-08;5!CL:0000312;1.63e-08;5!CL:0000453;1.72e-08;5!CL:0002251;5.00e-08;20!CL:0000154;2.26e-07;6!CL:0000240;3.10e-07;6!CL:0000311;3.10e-07;6!CL:0000079;3.10e-07;6!CL:0000237;3.10e-07;6!CL:0000840;3.25e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,8.26e-30,3;CL:0002166,1.98e-29,3;CL:0002159,4.33e-24,14;CL:0001014,7.92e-20,2;CL:0001016,7.92e-20,2;CL:0002573,1.50e-13,2;CL:0000362,4.74e-10,9;CL:0002077,1.09e-09,34;CL:0000622,1.05e-08,5;CL:0000312,1.72e-08,5;CL:0000453,1.72e-08,5;CL:0002251,4.95e-08,20;CL:0002076,8.95e-08,42;CL:0000154,2.16e-07,6;CL:0000221,3.04e-07,72;CL:0000240,3.25e-07,6;CL:0000311,3.25e-07,6;CL:0000079,3.25e-07,6;CL:0000237,3.25e-07,6;CL:0000036,3.25e-07,6;CL:0000840,3.25e-07,5;CL:0000357,3.25e-07,6;CL:0000114,3.25e-07,6;CL:0001029,3.25e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.40e-11;1!UBERON:0000358;7.83e-11;1!CL:0000357;3.10e-07;6!CL:0000114;3.10e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.33e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.21e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!3.46e-16!3;UBERON:0001003!3.53e-12!14;UBERON:0007376!3.53e-12!14;UBERON:0007383!3.53e-12!14;UBERON:0001708!4.10e-12!4;UBERON:0001704!4.10e-12!4;UBERON:0002419!8.53e-11!2;UBERON:0007771!8.53e-11!2;UBERON:0003297!8.53e-11!2;UBERON:0001821!8.53e-11!2;UBERON:0003487!8.53e-11!2;UBERON:0001820!8.53e-11!2;UBERON:0005089!8.53e-11!2;UBERON:0005088!8.53e-11!2;UBERON:0000365!4.56e-09!5;UBERON:0001004!1.61e-08!72;UBERON:0002090!3.24e-08!6;UBERON:0000166!4.65e-08!21;UBERON:0005910!1.25e-07!6;UBERON:0003102!3.57e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.67e-30;3!UBERON:0001708;2.90e-22;4!UBERON:0008895;2.90e-22;4!UBERON:0011159;6.09e-18;5!UBERON:0010371;4.81e-15;31!UBERON:0003929;3.97e-13;7!UBERON:0003350;1.48e-11;8!UBERON:0001828;1.48e-11;8!UBERON:0007029;2.53e-11;1!UBERON:0000989;3.40e-11;1!UBERON:0008811;3.40e-11;1!UBERON:0001003;1.87e-10;15!UBERON:0007376;1.87e-10;15!UBERON:0011137;1.88e-08;11!UBERON:0010323;1.88e-08;11!UBERON:0000161;1.92e-08;19!UBERON:0000166;1.92e-08;19!UBERON:0000486;7.20e-08;12!UBERON:0003729;2.68e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,8.26e-30,3;UBERON:0001708,3.00e-22,4;UBERON:0008895,3.00e-22,4;UBERON:0011159,6.26e-18,5;UBERON:0010188,4.82e-15,6;UBERON:0002539,4.82e-15,6;UBERON:0008816,4.82e-15,6;UBERON:0003102,4.61e-12,99;UBERON:0003350,1.46e-11,8;UBERON:0001828,1.46e-11,8;UBERON:0007029,2.53e-11,1;UBERON:0000989,3.41e-11,1;UBERON:0008811,3.41e-11,1;UBERON:0006258,3.41e-11,1;UBERON:0005876,3.41e-11,1;UBERON:0004874,3.41e-11,1;UBERON:0001003,1.87e-10,15;UBERON:0007376,1.87e-10,15;UBERON:0007383,1.87e-10,15;UBERON:0010323,1.90e-08,11;UBERON:0000033,8.97e-08,56;UBERON:0000166,2.59e-07,22;UBERON:0003729,2.65e-07,13;UBERON:0000153,6.00e-07,62;UBERON:0007811,6.00e-07,62;UBERON:0011137,9.79e-07,14 | |||
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|short_description=p1@C1orf68 | |||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p1@C1orf68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf68_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -11bp_to_ENST00000362017_5end |
EntrezGene: | C1orf68 |
HGNC: | 29468 |
UniProt: | Q5T750 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 8.26e-30 | 3 |
epithelial cell of Malassez | 1.98e-29 | 3 |
general ecto-epithelial cell | 4.33e-24 | 14 |
CD1a-positive Langerhans cell | 7.92e-20 | 2 |
immature CD1a-positive Langerhans cell | 7.92e-20 | 2 |
Schwann cell | 1.50e-13 | 2 |
epidermal cell | 4.74e-10 | 9 |
ecto-epithelial cell | 1.09e-09 | 34 |
acinar cell | 1.05e-08 | 5 |
keratinocyte | 1.72e-08 | 5 |
Langerhans cell | 1.72e-08 | 5 |
epithelial cell of alimentary canal | 4.95e-08 | 20 |
endo-epithelial cell | 8.95e-08 | 42 |
protein secreting cell | 2.16e-07 | 6 |
ectodermal cell | 3.04e-07 | 72 |
stratified squamous epithelial cell | 3.25e-07 | 6 |
keratin accumulating cell | 3.25e-07 | 6 |
stratified epithelial cell | 3.25e-07 | 6 |
keratinizing barrier epithelial cell | 3.25e-07 | 6 |
epithelial fate stem cell | 3.25e-07 | 6 |
immature conventional dendritic cell | 3.25e-07 | 5 |
stratified epithelial stem cell | 3.25e-07 | 6 |
surface ectodermal cell | 3.25e-07 | 6 |
common dendritic progenitor | 3.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 8.26e-30 | 3 |
jaw skeleton | 3.00e-22 | 4 |
splanchnocranium | 3.00e-22 | 4 |
primary subdivision of cranial skeletal system | 6.26e-18 | 5 |
protuberance | 4.82e-15 | 6 |
pharyngeal arch | 4.82e-15 | 6 |
embryonic head | 4.82e-15 | 6 |
surface structure | 4.61e-12 | 99 |
epithelium of mucosa | 1.46e-11 | 8 |
gingiva | 1.46e-11 | 8 |
surface | 2.53e-11 | 1 |
penis | 3.41e-11 | 1 |
intromittent organ | 3.41e-11 | 1 |
lateral plate mesenchyme | 3.41e-11 | 1 |
undifferentiated genital tubercle | 3.41e-11 | 1 |
somatopleure | 3.41e-11 | 1 |
skin epidermis | 1.87e-10 | 15 |
outer epithelium | 1.87e-10 | 15 |
enveloping layer of ectoderm | 1.87e-10 | 15 |
cranial skeletal system | 1.90e-08 | 11 |
head | 8.97e-08 | 56 |
oral opening | 2.59e-07 | 22 |
mouth mucosa | 2.65e-07 | 13 |
anterior region of body | 6.00e-07 | 62 |
craniocervical region | 6.00e-07 | 62 |
axial skeletal system | 9.79e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.21e-10 | 1 |