FFCP PHASE1:Hg19::chr5:176937351..176937419,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79930 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24583 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAT0,D6RAM3 | |||
|association_with_transcript=0bp_to_ENST00000312943,ENST00000377112,ENST00000501403,ENST00000502380,uc003mhl.2_5end | |||
|cluster_id=chr5:176937351..176937419,- | |||
|description=CAGE_peak_1_at_DOK3_5end | |||
|id=chr5:176937351..176937419,- | |||
|ontology_enrichment_celltype=CL:0000037!7.76e-63!172;CL:0000566!7.76e-63!172;CL:0002032!1.37e-61!165;CL:0000837!1.37e-61!165;CL:0000988!3.64e-58!182;CL:0002087!2.22e-54!119;CL:0002031!2.00e-51!124;CL:0000738!2.03e-51!140;CL:0000763!9.64e-48!112;CL:0000049!9.64e-48!112;CL:0000839!2.90e-43!70;CL:0000766!5.14e-43!76;CL:0000557!1.13e-42!71;CL:0002194!4.03e-42!63;CL:0000576!4.03e-42!63;CL:0000040!4.03e-42!63;CL:0000559!4.03e-42!63;CL:0002009!3.52e-40!65;CL:0002057!1.46e-36!42;CL:0000860!4.87e-33!45;CL:0000945!4.19e-28!24;CL:0000826!4.19e-28!24;CL:0000236!1.65e-16!14;CL:0000134!3.29e-12!358;CL:0000542!4.21e-12!53;CL:0000051!4.21e-12!53;CL:0002320!2.32e-11!365;CL:0000838!2.62e-11!52;CL:0000219!7.26e-09!390;CL:0002393!1.53e-08!9;CL:0002397!1.53e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.75e-42;24!CL:0000473;3.71e-35;39!CL:0000234;3.71e-35;39!CL:0000860;3.46e-33;33!CL:0002057;3.46e-33;33!CL:0000576;2.44e-28;48!CL:0000236;1.75e-22;13!CL:0000766;4.16e-21;69!CL:0002087;5.17e-20;104!CL:0000763;3.89e-16;100!CL:0000738;1.73e-15;136!CL:0000542;4.95e-12;53!CL:0000988;1.07e-11;177!CL:0000235;3.98e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.98e-74,115;CL:0002032,1.14e-73,161;CL:0000837,1.14e-73,161;CL:0000037,6.60e-73,168;CL:0000988,7.32e-68,177;CL:0000738,3.00e-66,136;CL:0002031,6.46e-66,120;CL:0002194,6.75e-55,59;CL:0000576,6.75e-55,59;CL:0000040,6.75e-55,59;CL:0000559,6.75e-55,59;CL:0000473,1.20e-54,48;CL:0000234,1.20e-54,48;CL:0002009,1.30e-52,61;CL:0000557,6.22e-51,67;CL:0000763,6.72e-51,108;CL:0000049,6.72e-51,108;CL:0000766,2.59e-50,72;CL:0000839,1.02e-49,66;CL:0000860,5.04e-45,42;CL:0002057,5.04e-45,42;CL:0000945,6.64e-42,24;CL:0000826,6.64e-42,24;CL:0000236,3.02e-24,14;CL:0000134,6.47e-21,354;CL:0002320,5.10e-20,361;CL:0000542,5.91e-19,53;CL:0000051,5.91e-19,53;CL:0000838,1.04e-17,52;CL:0000219,1.68e-17,386;CL:0000034,1.48e-13,441;CL:0000048,4.31e-13,427;CL:0000723,1.41e-12,433;CL:0000235,4.24e-11,6;CL:0002393,6.91e-10,9;CL:0002397,6.91e-10,9;CL:0000817,4.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-32;42!CL:0000049;1.74e-16;108!CL:0000051;4.95e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!4.21e-13!51;DOID:0060083!4.21e-13!51;DOID:1240!4.80e-09!39;DOID:8692!4.83e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.53e-07;51!DOID:0060083;2.53e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.65e-12,51;DOID:0060083,7.65e-12,51;DOID:1240,5.14e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.00e-47!102;UBERON:0003061!4.00e-47!102;UBERON:0002193!1.54e-43!112;UBERON:0002371!1.45e-38!80;UBERON:0001474!2.78e-34!86;UBERON:0002405!1.06e-28!115;UBERON:0004765!6.75e-26!101;UBERON:0001434!6.75e-26!101;UBERON:0003081!7.58e-12!216;UBERON:0007023!1.98e-11!115;UBERON:0002384!4.64e-11!375;UBERON:0002204!4.88e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.81e-46,98;UBERON:0003061,2.81e-46,98;UBERON:0002371,2.25e-45,76;UBERON:0002193,5.91e-44,108;UBERON:0002405,2.73e-43,93;UBERON:0001474,6.68e-41,82;UBERON:0004765,7.14e-36,90;UBERON:0001434,9.88e-31,100;UBERON:0002384,1.84e-19,371;UBERON:0003081,2.92e-14,203;UBERON:0002204,1.46e-12,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0105912831149,29.3920110230806,30.3036508057665,2.75354993794233,1.53531759238885,1.23852898652861,0,0,0,61.3540228595989,42.3664312812516,0.880801318004542,1.10799081706375,1.80490002723128,0.651032612147555,5.37397138175818,5.83008598834163,4.37878464978117,3.48955773070955,6.04601509902095,5.57943340731977,3.71886459049095,12.7462045286766,14.5561994320699,1.7261543539329,1.0246428261164,2.83778675866302,7.23965929546899,12.9096936716765,8.12558919566051,5.83551252582075,10.643339852256,6.06753408001728,3.97909060082173,6.41858054152187,8.31138263538754,1.64925650093358,2.19410023383795,1.27867425159808,1.16083695451434,4.53908179752912,8.09668923694247,4.52247597462138,3.65038042894141,5.64690996233303,1.81619850790011,6.62899744777616,5.69632297393592,1.90129757680748,4.46469029926591,2.51590374610051,0.673971786878971,0.901061357049038,0.964353520182481,6.84030584978997,5.37075028437543,5.47992461293902,22.879511779972,12.561188059029,11.5636203002262,13.2286368995617,17.2170274425485,16.0930683187255,11.8988077101275,8.58648379081828,10.2458334439701,12.9192181661607,10.3213771593812,1.32171328579026,2.80254281490768,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,1.9472843619281,2.08955684759121,7.04677190749985,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5721992861077,12.1682217872404,15.4576408780277,0,0,0,0,0,0,0,3.60998579454227,0.414656231081544,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,12.054170194371,27.4084121327941,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,3.09701308095126,0.822724546172388,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,47.565612832184,56.120723847837,1.9919716137556,0,0.59873811429845,0.383010740264733,15.4521715388434,13.6341214915313,9.26630687774414,66.4162915986589,19.2716271800819,0,0,8.35057990539238,20.5835701334869,0,10.9921710321845,0,0.447352215784832,0.333698283423817,21.6880785896265,0,0,0,0.99921590399346,2.81974010175699,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,3.29607748453519,0,0.398495976502139,17.6821705939935,1.51159648712566,0,46.5260564642843,0,0,0,13.3008816258987,0.295930216910801,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,6.59317076859104,0.332423363800313,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0.104421949505455,0.337005664903385,0,0,44.3365137794068,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.775912131907355,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,5.8342299273068,0,0,0,0,0,0,0,0,0.821432273351958,2.55493176133945,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,12.192959817473,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,1.17466153824464,0.314408610199332,4.14239055347196,7.93865634899121,2.76656284657122,16.1984155846592,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.683060432355218,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,18.4576692370864,24.6267420914966,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,23.027629540366,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,26.8495191004966,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.785233868459781,1.18818560130834,0.4226557275834,0,22.7441081511246,13.6650722503984,0.299823467774787,0,0,0,0,2.75237570042724,0.430018749454354,0,0.271965960763659,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,1.27940389140589,0.23806443146374,0.581300188524055,1.05527014302958,0,0.12729431655633,0,0.217716747896961,0,16.0297886174718,1.14755528628282,0,0.0814032686109745,0,0,0,0,0,0,0,8.65477312441413,25.3249108919554 | |||
|short_description=p1@DOK3 | |||
}} |
Latest revision as of 07:09, 17 September 2015
Short description: | p1@DOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DOK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312943, ENST00000377112, ENST00000501403, ENST00000502380, uc003mhl.2_5end |
EntrezGene: | DOK3 |
HGNC: | 24583 |
UniProt: | E9PAT0D6RAM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.81e-46 | 98 |
blood island | 2.81e-46 | 98 |
bone marrow | 2.25e-45 | 76 |
hemolymphoid system | 5.91e-44 | 108 |
immune system | 2.73e-43 | 93 |
bone element | 6.68e-41 | 82 |
skeletal element | 7.14e-36 | 90 |
skeletal system | 9.88e-31 | 100 |
connective tissue | 1.84e-19 | 371 |
lateral plate mesoderm | 2.92e-14 | 203 |
musculoskeletal system | 1.46e-12 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.65e-12 | 51 |
immune system cancer | 7.65e-12 | 51 |
leukemia | 5.14e-07 | 39 |