FFCP PHASE1:Hg19::chr5:177580933..177580947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55651 | |EntrezGene=55651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14377 | |HGNC=14377 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX24 | |UniProt=Q9NX24 | ||
|association_with_transcript=13bp_to_NM_001034833,NM_017838,uc003mir.2,uc003mis.2_5end | |association_with_transcript=13bp_to_NM_001034833,NM_017838,uc003mir.2,uc003mis.2_5end | ||
|cluster_id=chr5:177580933..177580947,- | |||
|description=CAGE_peak_2_at_NHP2_5end | |description=CAGE_peak_2_at_NHP2_5end | ||
|id=chr5:177580933..177580947,- | |id=chr5:177580933..177580947,- | ||
|ontology_enrichment_celltype=CL:0000542!1.43e-13!53;CL:0000051!1.43e-13!53;CL:0000838!1.79e-13!52;CL:0000183!2.46e-10!59;CL:0002371!3.40e-10!591;CL:0000012!6.97e-10!682;CL:0000144!2.40e-09!625;CL:0000548!5.81e-09!679;CL:0000004!5.81e-09!679;CL:0000255!5.81e-09!679;CL:0000003!1.02e-08!722;CL:0000187!1.18e-08!54;CL:0000222!1.80e-08!119;CL:0000680!1.96e-08!57;CL:0000056!1.96e-08!57;CL:0000355!1.96e-08!57;CL:0000945!3.32e-08!24;CL:0000826!3.32e-08!24;CL:0000393!3.78e-08!60;CL:0000211!3.78e-08!60;CL:0000791!1.08e-07!18;CL:0000789!1.08e-07!18;CL:0002420!1.08e-07!18;CL:0002419!1.08e-07!18;CL:0000790!1.08e-07!18;CL:0000192!1.51e-07!42;CL:0000514!1.51e-07!42;CL:0000236!2.17e-07!14;CL:0000084!4.20e-07!25;CL:0000827!4.20e-07!25;CL:1000497!9.52e-07!18;CL:0002518!9.52e-07!18 | |ontology_enrichment_celltype=CL:0000542!1.43e-13!53;CL:0000051!1.43e-13!53;CL:0000838!1.79e-13!52;CL:0000183!2.46e-10!59;CL:0002371!3.40e-10!591;CL:0000012!6.97e-10!682;CL:0000144!2.40e-09!625;CL:0000548!5.81e-09!679;CL:0000004!5.81e-09!679;CL:0000255!5.81e-09!679;CL:0000003!1.02e-08!722;CL:0000187!1.18e-08!54;CL:0000222!1.80e-08!119;CL:0000680!1.96e-08!57;CL:0000056!1.96e-08!57;CL:0000355!1.96e-08!57;CL:0000945!3.32e-08!24;CL:0000826!3.32e-08!24;CL:0000393!3.78e-08!60;CL:0000211!3.78e-08!60;CL:0000791!1.08e-07!18;CL:0000789!1.08e-07!18;CL:0002420!1.08e-07!18;CL:0002419!1.08e-07!18;CL:0000790!1.08e-07!18;CL:0000192!1.51e-07!42;CL:0000514!1.51e-07!42;CL:0000236!2.17e-07!14;CL:0000084!4.20e-07!25;CL:0000827!4.20e-07!25;CL:1000497!9.52e-07!18;CL:0002518!9.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;9.05e-09;53!CL:0000945;3.61e-08;24!CL:0000791;1.30e-07;18!CL:0000789;1.30e-07;18!CL:0002419;1.30e-07;18!CL:1000497;2.10e-07;17!CL:0002518;2.10e-07;17!CL:0000236;2.20e-07;13!CL:0000084;5.38e-07;25!CL:1000449;5.90e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.43e-13,53;CL:0000051,1.43e-13,53;CL:0000838,1.79e-13,52;CL:0000222,1.42e-08,121;CL:0000187,2.19e-08,55;CL:0000945,3.32e-08,24;CL:0000826,3.32e-08,24;CL:0000680,3.50e-08,58;CL:0000056,3.50e-08,58;CL:0000355,3.50e-08,58;CL:0000393,6.51e-08,61;CL:0000211,6.51e-08,61;CL:0000791,1.08e-07,18;CL:0000789,1.08e-07,18;CL:0002420,1.08e-07,18;CL:0002419,1.08e-07,18;CL:0000790,1.08e-07,18;CL:0000236,2.17e-07,14;CL:1000497,2.79e-07,17;CL:0002518,2.79e-07,17;CL:0000192,2.91e-07,43;CL:0000514,2.91e-07,43;CL:0000084,4.20e-07,25;CL:0000827,4.20e-07,25;CL:1000449,7.68e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000051;9.05e-09;53!CL:0000790;1.30e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.01e-08!70;UBERON:0000486!4.81e-08!82;UBERON:0000914!5.23e-08!83;UBERON:0002329!5.23e-08!83;UBERON:0003077!5.23e-08!83;UBERON:0003059!5.23e-08!83;UBERON:0007282!5.23e-08!83;UBERON:0009618!5.23e-08!83;UBERON:0007285!5.23e-08!83;UBERON:0003104!5.70e-08!238;UBERON:0009142!5.70e-08!238;UBERON:0000055!1.05e-07!69;UBERON:0002049!1.58e-07!79;UBERON:0007798!1.58e-07!79;UBERON:0001134!1.88e-07!61;UBERON:0002036!1.88e-07!61;UBERON:0003082!1.88e-07!61;UBERON:0001981!1.97e-07!60;UBERON:0007500!1.97e-07!60;UBERON:0004537!1.97e-07!60;UBERON:0006965!1.97e-07!60;UBERON:0000490!2.48e-07!138;UBERON:0002100!2.48e-07!216;UBERON:0005256!6.59e-07!143;UBERON:0002385!7.23e-07!63;UBERON:0001015!7.23e-07!63;UBERON:0000383!7.23e-07!63 | |ontology_enrichment_uberon=UBERON:0004290!1.01e-08!70;UBERON:0000486!4.81e-08!82;UBERON:0000914!5.23e-08!83;UBERON:0002329!5.23e-08!83;UBERON:0003077!5.23e-08!83;UBERON:0003059!5.23e-08!83;UBERON:0007282!5.23e-08!83;UBERON:0009618!5.23e-08!83;UBERON:0007285!5.23e-08!83;UBERON:0003104!5.70e-08!238;UBERON:0009142!5.70e-08!238;UBERON:0000055!1.05e-07!69;UBERON:0002049!1.58e-07!79;UBERON:0007798!1.58e-07!79;UBERON:0001134!1.88e-07!61;UBERON:0002036!1.88e-07!61;UBERON:0003082!1.88e-07!61;UBERON:0001981!1.97e-07!60;UBERON:0007500!1.97e-07!60;UBERON:0004537!1.97e-07!60;UBERON:0006965!1.97e-07!60;UBERON:0000490!2.48e-07!138;UBERON:0002100!2.48e-07!216;UBERON:0005256!6.59e-07!143;UBERON:0002385!7.23e-07!63;UBERON:0001015!7.23e-07!63;UBERON:0000383!7.23e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.90e-07;15!UBERON:0004819;5.90e-07;15!UBERON:0001285;5.90e-07;15!UBERON:0007684;5.90e-07;15 | |||
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| ||
|short_description=p2@NHP2 | |short_description=p2@NHP2 | ||
}} | }} |
Latest revision as of 07:35, 17 September 2015
Short description: | p2@NHP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NHP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_001034833, NM_017838, uc003mir.2, uc003mis.2_5end |
EntrezGene: | NHP2 |
HGNC: | 14377 |
UniProt: | Q9NX24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.43e-13 | 53 |
common lymphoid progenitor | 1.43e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.79e-13 | 52 |
mesodermal cell | 1.42e-08 | 121 |
muscle cell | 2.19e-08 | 55 |
lymphocyte of B lineage | 3.32e-08 | 24 |
pro-B cell | 3.32e-08 | 24 |
muscle precursor cell | 3.50e-08 | 58 |
myoblast | 3.50e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-08 | 58 |
electrically responsive cell | 6.51e-08 | 61 |
electrically active cell | 6.51e-08 | 61 |
mature alpha-beta T cell | 1.08e-07 | 18 |
alpha-beta T cell | 1.08e-07 | 18 |
immature T cell | 1.08e-07 | 18 |
mature T cell | 1.08e-07 | 18 |
immature alpha-beta T cell | 1.08e-07 | 18 |
B cell | 2.17e-07 | 14 |
kidney cell | 2.79e-07 | 17 |
kidney epithelial cell | 2.79e-07 | 17 |
smooth muscle cell | 2.91e-07 | 43 |
smooth muscle myoblast | 2.91e-07 | 43 |
T cell | 4.20e-07 | 25 |
pro-T cell | 4.20e-07 | 25 |
epithelial cell of nephron | 7.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.77e-11 | 78 |
somite | 1.70e-08 | 71 |
presomitic mesoderm | 1.70e-08 | 71 |
presumptive segmental plate | 1.70e-08 | 71 |
dermomyotome | 1.70e-08 | 71 |
trunk paraxial mesoderm | 1.70e-08 | 71 |
unilaminar epithelium | 2.42e-08 | 148 |
dense mesenchyme tissue | 3.61e-08 | 73 |
paraxial mesoderm | 6.29e-08 | 72 |
presumptive paraxial mesoderm | 6.29e-08 | 72 |
trunk | 6.43e-08 | 199 |
vessel | 6.57e-08 | 68 |
multilaminar epithelium | 7.41e-08 | 83 |
mesenchyme | 8.97e-08 | 160 |
entire embryonic mesenchyme | 8.97e-08 | 160 |
vasculature | 1.04e-07 | 78 |
vascular system | 1.04e-07 | 78 |
epithelial tube open at both ends | 1.18e-07 | 59 |
blood vessel | 1.18e-07 | 59 |
blood vasculature | 1.18e-07 | 59 |
vascular cord | 1.18e-07 | 59 |
skeletal muscle tissue | 3.09e-07 | 62 |
striated muscle tissue | 3.09e-07 | 62 |
myotome | 3.09e-07 | 62 |
nephron epithelium | 7.68e-07 | 15 |
renal tubule | 7.68e-07 | 15 |
nephron tubule | 7.68e-07 | 15 |
nephron | 7.68e-07 | 15 |
uriniferous tubule | 7.68e-07 | 15 |
nephrogenic mesenchyme | 7.68e-07 | 15 |