FFCP PHASE2:Hg19::chr1:153935277..153935316,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:27173 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:12876 |TSSclassifier=stron...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=27173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=12876 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NY26 | ||
|association_with_transcript=-52bp_to_AF132942_5end | |association_with_transcript=-52bp_to_AF132942_5end | ||
|cluster_id=chr1:153935277..153935316,- | |cluster_id=chr1:153935277..153935316,- |
Latest revision as of 07:53, 17 September 2015
Short description: | p8@SLC39A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC39A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_AF132942_5end |
EntrezGene: | SLC39A1 |
HGNC: | 12876 |
UniProt: | Q9NY26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@SLC39A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.48e-16 | 10 |
nephron tubule epithelial cell | 5.48e-16 | 10 |
kidney cell | 4.25e-14 | 17 |
kidney epithelial cell | 4.25e-14 | 17 |
epithelial cell of nephron | 3.70e-13 | 15 |
epithelial cell | 1.66e-10 | 253 |
kidney cortical cell | 2.65e-10 | 12 |
renal cortical epithelial cell | 2.65e-10 | 12 |
brush border epithelial cell | 6.46e-09 | 3 |
kidney cortex tubule cell | 6.46e-09 | 3 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
larynx | 2.64e-25 | 9 |
nephron tubule epithelium | 5.48e-16 | 10 |
nephron epithelium | 3.70e-13 | 15 |
renal tubule | 3.70e-13 | 15 |
nephron tubule | 3.70e-13 | 15 |
nephron | 3.70e-13 | 15 |
uriniferous tubule | 3.70e-13 | 15 |
nephrogenic mesenchyme | 3.70e-13 | 15 |
excretory tube | 3.18e-12 | 16 |
kidney epithelium | 3.18e-12 | 16 |
Showing 1 to 10 of 25 entries