FFCP PHASE1:Hg19::chr16:67022582..67022605,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283848 | |EntrezGene=283848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26741 | |HGNC=26741 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEE9,F5H5S4 | |UniProt=F8WEE9,F5H5S4 | ||
|association_with_transcript=-1bp_to_ENST00000338718,ENST00000541479_5end | |association_with_transcript=-1bp_to_ENST00000338718,ENST00000541479_5end | ||
|cluster_id=chr16:67022582..67022605,+ | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_5_at_CES4A_5end | |description=CAGE_peak_5_at_CES4A_5end | ||
|id=chr16:67022582..67022605,+ | |id=chr16:67022582..67022605,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.93e-13;1!CL:0000911;1.93e-13;1!CL:0000814;1.93e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.06e-13,1;CL:0000914,2.06e-13,1;CL:0000911,2.06e-13,1;CL:0000814,2.06e-13,1;CL:0002042,2.06e-13,1;CL:0002039,2.06e-13,1;CL:0002040,2.06e-13,1;CL:0002041,2.06e-13,1;CL:0000893,2.43e-07,2;CL:0002489,2.43e-07,2;CL:0000809,2.43e-07,2;CL:0000808,2.43e-07,2;CL:0000894,2.43e-07,2;CL:0000806,2.43e-07,2;CL:0000807,2.43e-07,2;CL:0000805,2.43e-07,2;CL:0002425,2.43e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.15e-11;10!UBERON:0007687;3.15e-11;10!UBERON:0003104;1.88e-09;31!UBERON:0007297;2.15e-07;2!CL:0002425;2.35e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;7.24e-13;1!DOID:0060061;7.24e-13;1!DOID:8691;7.24e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.38e-13,1;DOID:0060061,5.38e-13,1;DOID:8691,5.38e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002368!7.37e-13!35;UBERON:0009722!1.09e-11!11;UBERON:0007690!1.09e-11!11;UBERON:0002530!6.37e-11!59;UBERON:0002046!1.64e-09!5;UBERON:0004117!1.64e-09!5;UBERON:0007689!1.64e-09!5;UBERON:0007123!1.64e-09!5;UBERON:0003091!1.64e-09!5;UBERON:0003929!2.56e-09!54;UBERON:0000949!3.04e-09!45;UBERON:0008814!2.83e-08!15;UBERON:0002417!5.76e-07!61;UBERON:0000916!5.76e-07!61;UBERON:0000007!7.87e-07!2 | |ontology_enrichment_uberon=UBERON:0002368!7.37e-13!35;UBERON:0009722!1.09e-11!11;UBERON:0007690!1.09e-11!11;UBERON:0002530!6.37e-11!59;UBERON:0002046!1.64e-09!5;UBERON:0004117!1.64e-09!5;UBERON:0007689!1.64e-09!5;UBERON:0007123!1.64e-09!5;UBERON:0003091!1.64e-09!5;UBERON:0003929!2.56e-09!54;UBERON:0000949!3.04e-09!45;UBERON:0008814!2.83e-08!15;UBERON:0002417!5.76e-07!61;UBERON:0000916!5.76e-07!61;UBERON:0000007!7.87e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.63e-17;3!UBERON:0004054;9.63e-17;3!UBERON:0001301;1.61e-13;1!UBERON:0007029;7.24e-13;1!UBERON:0001000;7.24e-13;1!UBERON:0005352;7.24e-13;1!UBERON:0005904;8.41e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.08e-16,3;UBERON:0004054,1.08e-16,3;UBERON:0001301,1.61e-13,1;UBERON:0007029,6.82e-13,1;UBERON:0001000,8.64e-13,1;UBERON:0005352,8.64e-13,1;UBERON:0005904,9.20e-13,4;UBERON:0002417,8.87e-12,60;UBERON:0000916,8.87e-12,60;UBERON:0005172,3.71e-10,54;UBERON:0005173,3.71e-10,54;UBERON:0002368,2.16e-08,35;UBERON:0002113,1.59e-07,26;UBERON:0003918,1.59e-07,26;UBERON:0011143,1.59e-07,26;UBERON:0005095,1.59e-07,26;UBERON:0007687,1.59e-07,26 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.83240725324762,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,12.329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6286801228784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,4.4919253160543,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,2.05173127149315,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.682986574053893,0.620916591138472,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,1.07963795609311,7.6440270061928,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,3.18254701254366,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.186224142887574,0.672791175483681,0.509177266225319,0.404234377916439,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,1.83240725324762,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,12.329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6286801228784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,4.4919253160543,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,2.05173127149315,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.682986574053893,0.620916591138472,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,1.07963795609311,7.6440270061928,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0.121917924982269,0.647428837187895,3.18254701254366,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0.186224142887574,0.672791175483681,0.509177266225319,0.404234377916439,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@CES4A | |short_description=p5@CES4A | ||
}} | }} |
Latest revision as of 09:21, 17 September 2015
Short description: | p5@CES4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CES4A_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | -1bp_to_ENST00000338718, ENST00000541479_5end |
EntrezGene: | CES4A |
HGNC: | 26741 |
UniProt: | F8WEE9F5H5S4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.06e-13 | 1 |
immature NK T cell | 2.06e-13 | 1 |
effector T cell | 2.06e-13 | 1 |
mature NK T cell | 2.06e-13 | 1 |
immature NK T cell stage IV | 2.06e-13 | 1 |
immature NK T cell stage I | 2.06e-13 | 1 |
immature NK T cell stage II | 2.06e-13 | 1 |
immature NK T cell stage III | 2.06e-13 | 1 |
thymocyte | 2.43e-07 | 2 |
double negative thymocyte | 2.43e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.43e-07 | 2 |
DN4 thymocyte | 2.43e-07 | 2 |
DN1 thymic pro-T cell | 2.43e-07 | 2 |
DN2 thymocyte | 2.43e-07 | 2 |
DN3 thymocyte | 2.43e-07 | 2 |
immature single positive thymocyte | 2.43e-07 | 2 |
early T lineage precursor | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.08e-16 | 3 |
internal male genitalia | 1.08e-16 | 3 |
epididymis | 1.61e-13 | 1 |
surface | 6.82e-13 | 1 |
vas deferens | 8.64e-13 | 1 |
spermatic cord | 8.64e-13 | 1 |
duct of male reproductive system | 9.20e-13 | 4 |
abdominal segment of trunk | 8.87e-12 | 60 |
abdomen | 8.87e-12 | 60 |
abdomen element | 3.71e-10 | 54 |
abdominal segment element | 3.71e-10 | 54 |
endocrine gland | 2.16e-08 | 35 |
kidney | 1.59e-07 | 26 |
kidney mesenchyme | 1.59e-07 | 26 |
upper urinary tract | 1.59e-07 | 26 |
kidney rudiment | 1.59e-07 | 26 |
kidney field | 1.59e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.38e-13 | 1 |
cutaneous T cell lymphoma | 5.38e-13 | 1 |
mycosis fungoides | 5.38e-13 | 1 |