FFCP PHASE1:Hg19::chr20:60907679..60907682,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:60907679..60907682,-
|short_description=p1@MIR4758
|description=CAGE_peak_1_at_MIR4758_5end
|association_with_transcript=-63bp_to_NR_039915_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100616340 | |EntrezGene=100616340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=41836 | |HGNC=41836 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_NR_039915_5end | |||
|cluster_id=chr20:60907679..60907682,- | |||
|description=CAGE_peak_1_at_MIR4758_5end | |||
|id=chr20:60907679..60907682,- | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-21!254;CL:0000223!2.21e-08!59;CL:0000076!4.32e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.45e-26;1!CL:0000159;6.85e-14;2!CL:0002262;6.85e-14;2!CL:1000398;6.85e-14;2!CL:0002541;1.47e-09;3!CL:0000306;1.75e-07;4!CL:0002222;1.75e-07;4!CL:0002224;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.78e-26,1;CL:0002262,6.43e-14,2;CL:1000398,6.43e-14,2;CL:0000159,7.30e-14,2;CL:0002541,1.81e-09,3;CL:0000306,1.69e-07,4;CL:0002222,1.69e-07,4;CL:0002224,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.57e-11!106;DOID:0050687!1.88e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.45e-26;1!DOID:4556;1.47e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.78e-26,1;DOID:4556,1.54e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.23e-12!12;UBERON:0006554!7.86e-08!44;UBERON:0000119!1.46e-07!312;UBERON:0001008!1.58e-07!45;UBERON:0000064!1.68e-07!219;UBERON:0000483!1.70e-07!309;UBERON:0003064!2.03e-07!37;UBERON:0000481!2.34e-07!347;UBERON:0000353!6.34e-07!17;UBERON:0003729!8.24e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.45e-26;1!UBERON:0001281;6.85e-14;2!UBERON:0003497;6.85e-14;2!UBERON:0003909;6.85e-14;2!UBERON:0003835;6.85e-14;2!UBERON:0004909;6.85e-14;2!UBERON:0002702;1.14e-13;2!UBERON:0001280;1.05e-09;3!UBERON:0004647;1.05e-09;3!UBERON:0001870;1.47e-09;3!UBERON:0003124;1.47e-09;3!UBERON:0000920;1.47e-09;3!UBERON:0000353;1.31e-07;15!UBERON:0010077;1.75e-07;4!UBERON:0005389;1.75e-07;4!UBERON:0000484;1.75e-07;4!UBERON:0000965;1.75e-07;4!UBERON:0001803;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.78e-26,1;UBERON:0001281,6.43e-14,2;UBERON:0003497,6.43e-14,2;UBERON:0003909,6.43e-14,2;UBERON:0003835,6.43e-14,2;UBERON:0004909,7.30e-14,2;UBERON:0002702,8.28e-14,2;UBERON:0001280,1.01e-09,3;UBERON:0004647,1.01e-09,3;UBERON:0005171,1.01e-09,3;UBERON:0001870,1.19e-09,3;UBERON:0000920,1.81e-09,3;UBERON:0000353,1.22e-07,15;UBERON:0010077,1.69e-07,4;UBERON:0005389,1.69e-07,4;UBERON:0000484,1.69e-07,4;UBERON:0002546,1.69e-07,4;UBERON:0000965,1.69e-07,4;UBERON:0001803,1.69e-07,4;UBERON:0003073,1.69e-07,4;UBERON:0005426,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0.311211035399766,0.404132016209064,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.826606249406124,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.548751427043128,0,0.201057944823262,0.462942225792648,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.510281115829547,0,1.54227252690289,0.270946437543853,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0.269272933229316,0.325942115766024,0,0,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0.677294319023596,0.146178634172371,0.410577285266046,0.290967049465258,0,0,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.315132729228895,0.412079291905832,0.202210631562555,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0.1251909307065,0,0.554645257684261,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.782982875895635,0.226705925512272,0,0.489473409012935,0,0.617602894321944,0.657852148736121,0,0,0.168942440653073,0.256241518587947,0.345430341731199,0.911579868532147,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0.294443155503077,0.235939446695481,0.183428598521679,0.808679663052368,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,1.14553434272025,0,0,2.01339777236026,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.269475606319761,0,0.244482888365733,0,0,0,0 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| ||
|short_description=p1@MIR4758 | |||
}} | }} |
Latest revision as of 10:23, 17 September 2015
Short description: | p1@MIR4758 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4758_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_NR_039915_5end |
EntrezGene: | MIR4758 |
HGNC: | 41836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.78e-26 | 1 |
endothelial cell of sinusoid | 6.43e-14 | 2 |
endothelial cell of hepatic sinusoid | 6.43e-14 | 2 |
seromucus secreting cell | 7.30e-14 | 2 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
crystallin accumulating cell | 1.69e-07 | 4 |
vertebrate lens cell | 1.69e-07 | 4 |
lens epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.78e-26 | 1 |
hepatic sinusoid | 6.43e-14 | 2 |
abdomen blood vessel | 6.43e-14 | 2 |
sinusoid | 6.43e-14 | 2 |
abdominal segment blood vessel | 6.43e-14 | 2 |
epithelium of gonad | 7.30e-14 | 2 |
middle frontal gyrus | 8.28e-14 | 2 |
liver parenchyma | 1.01e-09 | 3 |
liver lobule | 1.01e-09 | 3 |
hepatic duct | 1.01e-09 | 3 |
frontal cortex | 1.19e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
parenchyma | 1.22e-07 | 15 |
cuboidal epithelium | 1.69e-07 | 4 |
transparent eye structure | 1.69e-07 | 4 |
simple cuboidal epithelium | 1.69e-07 | 4 |
cranial placode | 1.69e-07 | 4 |
lens of camera-type eye | 1.69e-07 | 4 |
epithelium of lens | 1.69e-07 | 4 |
lens placode | 1.69e-07 | 4 |
lens vesicle | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.78e-26 | 1 |
lung large cell carcinoma | 1.54e-09 | 3 |