FFCP PHASE1:Hg19::chr16:67360712..67360752,+: Difference between revisions
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|id=chr16:67360712..67360752,+
|short_description=p1@LRRC36
|description=CAGE_peak_1_at_LRRC36_5end
|association_with_transcript=0bp_to_ENST00000329956,NM_018296,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55282 | |EntrezGene=55282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25615 | |HGNC=25615 | ||
|TSSclassifier=strong | |||
|UniProt=Q1X8D7 | |UniProt=Q1X8D7 | ||
|association_with_transcript=0bp_to_ENST00000329956,NM_018296,uc002esv.2,uc002esw.2_5end | |||
|cluster_id=chr16:67360712..67360752,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LRRC36_5end | |||
|id=chr16:67360712..67360752,+ | |||
|ontology_enrichment_celltype=CL:0000163!5.23e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.01e-33;3!CL:0002174;1.01e-11;1!CL:0000501;1.01e-11;1!CL:0000451;2.09e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.66e-33,3;CL:0002174,7.76e-12,1;CL:0000501,7.76e-12,1;CL:0000451,2.06e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.01e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.86e-11!86;UBERON:0007284!7.86e-11!86;UBERON:0002346!1.25e-10!90;UBERON:0007023!1.57e-10!115;UBERON:0001017!7.63e-10!82;UBERON:0005743!8.13e-10!86;UBERON:0001049!1.46e-09!57;UBERON:0005068!1.46e-09!57;UBERON:0006241!1.46e-09!57;UBERON:0007135!1.46e-09!57;UBERON:0000073!7.15e-09!94;UBERON:0001016!7.15e-09!94;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0003076!1.25e-07!15;UBERON:0003057!1.25e-07!15;UBERON:0004732!1.65e-07!13;UBERON:0002616!3.01e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0001021;1.01e-11;1!UBERON:0003296;2.49e-11;4!UBERON:0010133;2.49e-11;4!UBERON:0001894;7.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.26e-12,1;UBERON:0001785,6.26e-12,1;UBERON:0002464,6.26e-12,1;UBERON:0004904,6.26e-12,1;UBERON:0001021,6.26e-12,1;UBERON:0003902,6.26e-12,1;UBERON:0005425,6.26e-12,1;UBERON:0003296,3.78e-11,4;UBERON:0010133,3.78e-11,4;UBERON:0001894,9.65e-07,7;UBERON:0006222,9.65e-07,7 | |||
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| ||
|short_description=p1@LRRC36 | |||
}} | }} |
Latest revision as of 10:32, 17 September 2015
Short description: | p1@LRRC36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC36_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000329956, NM_018296, uc002esv.2, uc002esw.2_5end |
EntrezGene: | LRRC36 |
HGNC: | 25615 |
UniProt: | Q1X8D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.66e-33 | 3 |
follicular cell of ovary | 7.76e-12 | 1 |
granulosa cell | 7.76e-12 | 1 |
dendritic cell | 2.06e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.26e-12 | 1 |
cranial nerve | 6.26e-12 | 1 |
nerve trunk | 6.26e-12 | 1 |
nerve connecting eye with brain | 6.26e-12 | 1 |
nerve | 6.26e-12 | 1 |
retinal neural layer | 6.26e-12 | 1 |
presumptive neural retina | 6.26e-12 | 1 |
gland of diencephalon | 3.78e-11 | 4 |
neuroendocrine gland | 3.78e-11 | 4 |
diencephalon | 9.65e-07 | 7 |
future diencephalon | 9.65e-07 | 7 |