FFCP PHASE1:Hg19::chr1:154941430..154941469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T188 | |UniProt=Q5T188 | ||
|association_with_transcript=-61bp_to_ENST00000414115_5end | |association_with_transcript=-61bp_to_ENST00000414115_5end | ||
|cluster_id=chr1:154941430..154941469,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_19_at_SHC1_5end | |description=CAGE_peak_19_at_SHC1_5end | ||
|id=chr1:154941430..154941469,- | |id=chr1:154941430..154941469,- | ||
|ontology_enrichment_celltype=CL:0002139!6.88e-19!24;CL:0000115!5.35e-17!35;CL:0000213!8.30e-13!57;CL:0000215!8.30e-13!57;CL:0002078!2.21e-12!44;CL:0000071!7.28e-12!18;CL:0002546!7.28e-12!18;CL:0000220!7.39e-11!246;CL:0002321!1.17e-10!248;CL:0000222!4.09e-10!119;CL:0005020!3.29e-09!6;CL:0002138!3.29e-09!6;CL:0005022!3.29e-09!6;CL:0000076!8.75e-08!62;CL:0002144!3.39e-07!3;CL:0000066!3.55e-07!254 | |ontology_enrichment_celltype=CL:0002139!6.88e-19!24;CL:0000115!5.35e-17!35;CL:0000213!8.30e-13!57;CL:0000215!8.30e-13!57;CL:0002078!2.21e-12!44;CL:0000071!7.28e-12!18;CL:0002546!7.28e-12!18;CL:0000220!7.39e-11!246;CL:0002321!1.17e-10!248;CL:0000222!4.09e-10!119;CL:0005020!3.29e-09!6;CL:0002138!3.29e-09!6;CL:0005022!3.29e-09!6;CL:0000076!8.75e-08!62;CL:0002144!3.39e-07!3;CL:0000066!3.55e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002262;3.11e-23;2!CL:1000398;3.11e-23;2!CL:0002138;4.61e-17;6!CL:0000222;2.46e-12;1!CL:0000115;1.03e-07;36!CL:0002139;1.27e-07;24!CL:0000123;5.11e-07;2!CL:0000242;5.11e-07;2!CL:0000317;8.52e-07;2!CL:1000448;8.52e-07;2!CL:0002308;8.52e-07;2!CL:0002140;8.52e-07;2!CL:0002593;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.79e-23,2;CL:1000398,2.79e-23,2;CL:0005020,5.76e-17,6;CL:0002138,5.76e-17,6;CL:0005022,5.76e-17,6;CL:0000115,1.01e-10,36;CL:0002078,1.69e-08,45;CL:0002139,1.34e-07,24;CL:0000242,5.11e-07,2;CL:0000317,6.07e-07,2;CL:1000448,6.07e-07,2;CL:0002308,6.07e-07,2;CL:0002140,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;4.61e-17;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;7.02e-13;1!DOID:4549;7.02e-13;1!DOID:5861;7.02e-13;1!DOID:6496;7.02e-13;1!DOID:4074;5.11e-07;2!DOID:4905;5.11e-07;2!DOID:3498;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-13,1;DOID:4549,7.03e-13,1;DOID:5861,7.03e-13,1;DOID:6496,7.03e-13,1;DOID:4074,5.41e-07,2;DOID:4905,5.41e-07,2;DOID:3498,5.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.28e-12!18;UBERON:0004638!7.28e-12!18;UBERON:0004852!7.28e-12!18;UBERON:0000055!6.01e-11!69;UBERON:0002049!1.57e-10!79;UBERON:0007798!1.57e-10!79;UBERON:0002465!1.40e-09!10;UBERON:0000487!3.28e-09!22;UBERON:0006914!8.65e-08!25;UBERON:0001981!1.51e-07!60;UBERON:0007500!1.51e-07!60;UBERON:0004537!1.51e-07!60;UBERON:0006965!1.51e-07!60;UBERON:0001915!3.39e-07!3;UBERON:0001982!3.39e-07!3;UBERON:0001473!9.37e-07!8;UBERON:0004536!9.37e-07!8;UBERON:0006558!9.37e-07!8 | |ontology_enrichment_uberon=UBERON:0001986!7.28e-12!18;UBERON:0004638!7.28e-12!18;UBERON:0004852!7.28e-12!18;UBERON:0000055!6.01e-11!69;UBERON:0002049!1.57e-10!79;UBERON:0007798!1.57e-10!79;UBERON:0002465!1.40e-09!10;UBERON:0000487!3.28e-09!22;UBERON:0006914!8.65e-08!25;UBERON:0001981!1.51e-07!60;UBERON:0007500!1.51e-07!60;UBERON:0004537!1.51e-07!60;UBERON:0006965!1.51e-07!60;UBERON:0001915!3.39e-07!3;UBERON:0001982!3.39e-07!3;UBERON:0001473!9.37e-07!8;UBERON:0004536!9.37e-07!8;UBERON:0006558!9.37e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.11e-23;2!UBERON:0003497;3.11e-23;2!UBERON:0003909;3.11e-23;2!UBERON:0003835;3.11e-23;2!UBERON:0001280;7.82e-16;3!UBERON:0004647;7.82e-16;3!UBERON:0003513;7.36e-15;7!UBERON:0001473;5.95e-13;8!UBERON:0004536;5.95e-13;8!UBERON:0006558;5.95e-13;8!UBERON:0002465;1.78e-10;10!UBERON:0001003;3.08e-07;15!UBERON:0007376;3.08e-07;15!UBERON:0002419;8.52e-07;2!UBERON:0007771;8.52e-07;2!UBERON:0003297;8.52e-07;2!UBERON:0001821;8.52e-07;2!UBERON:0003487;8.52e-07;2!UBERON:0002456;8.52e-07;2!UBERON:0001820;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.79e-23,2;UBERON:0003497,2.79e-23,2;UBERON:0003909,2.79e-23,2;UBERON:0003835,2.79e-23,2;UBERON:0001280,7.27e-16,3;UBERON:0004647,7.27e-16,3;UBERON:0005171,7.27e-16,3;UBERON:0003513,8.50e-15,7;UBERON:0001473,7.01e-13,8;UBERON:0004536,7.01e-13,8;UBERON:0006558,7.01e-13,8;UBERON:0002465,2.03e-10,10;UBERON:0002394,2.17e-08,6;UBERON:0003928,2.17e-08,6;UBERON:0001003,2.48e-07,15;UBERON:0007376,2.48e-07,15;UBERON:0007383,2.48e-07,15;UBERON:0000055,2.60e-07,68;UBERON:0002419,6.07e-07,2;UBERON:0007771,6.07e-07,2;UBERON:0003297,6.07e-07,2;UBERON:0001821,6.07e-07,2;UBERON:0003487,6.07e-07,2;UBERON:0001820,6.07e-07,2;UBERON:0005089,6.07e-07,2;UBERON:0005088,6.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0,0.35576626268671,1.00416183829401,0.402829317109147,3.80136052859256,0.488124115096339,0.735326160691737,0,0.714397826272638,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,1.44366447761074,0.925971025153221,1.33177906564219,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.404364963146632,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,3.64170569301139,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.171986032471617,0,0,0,0,17.4747130849171,0,0,0,0,0,0,0,0,0,0,1.02956998717179,0,1.36677789121976,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.410462603746695,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.936669811613763,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,1.41972529649618,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p19@SHC1 | |short_description=p19@SHC1 | ||
}} | }} |
Latest revision as of 10:40, 17 September 2015
Short description: | p19@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SHC1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -61bp_to_ENST00000414115_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T188 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.79e-23 | 2 |
endothelial cell of hepatic sinusoid | 2.79e-23 | 2 |
lymphangioblast | 5.76e-17 | 6 |
endothelial cell of lymphatic vessel | 5.76e-17 | 6 |
vascular lymphangioblast | 5.76e-17 | 6 |
endothelial cell | 1.01e-10 | 36 |
meso-epithelial cell | 1.69e-08 | 45 |
endothelial cell of vascular tree | 1.34e-07 | 24 |
Merkel cell | 5.11e-07 | 2 |
sebum secreting cell | 6.07e-07 | 2 |
epithelial cell of sweat gland | 6.07e-07 | 2 |
epithelial cell of skin gland | 6.07e-07 | 2 |
acinar cell of sebaceous gland | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.79e-23 | 2 |
abdomen blood vessel | 2.79e-23 | 2 |
sinusoid | 2.79e-23 | 2 |
abdominal segment blood vessel | 2.79e-23 | 2 |
liver parenchyma | 7.27e-16 | 3 |
liver lobule | 7.27e-16 | 3 |
hepatic duct | 7.27e-16 | 3 |
trunk blood vessel | 8.50e-15 | 7 |
lymphatic vessel | 7.01e-13 | 8 |
lymph vasculature | 7.01e-13 | 8 |
lymphatic part of lymphoid system | 7.01e-13 | 8 |
lymphoid system | 2.03e-10 | 10 |
bile duct | 2.17e-08 | 6 |
digestive system duct | 2.17e-08 | 6 |
skin epidermis | 2.48e-07 | 15 |
outer epithelium | 2.48e-07 | 15 |
enveloping layer of ectoderm | 2.48e-07 | 15 |
vessel | 2.60e-07 | 68 |
skin gland | 6.07e-07 | 2 |
epidermis gland | 6.07e-07 | 2 |
gland of integumental system | 6.07e-07 | 2 |
sebaceous gland | 6.07e-07 | 2 |
skin sebaceous gland | 6.07e-07 | 2 |
sweat gland | 6.07e-07 | 2 |
sweat gland placode | 6.07e-07 | 2 |
sebaceous gland placode | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-13 | 1 |
extraosseous chondrosarcoma | 7.03e-13 | 1 |
myxoid chondrosarcoma | 7.03e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-13 | 1 |
pancreas adenocarcinoma | 5.41e-07 | 2 |
pancreatic carcinoma | 5.41e-07 | 2 |
pancreatic ductal adenocarcinoma | 5.41e-07 | 2 |