FFCP PHASE1:Hg19::chr7:15726220..15726236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4223 | |EntrezGene=4223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7014 | |HGNC=7014 | ||
|TSSclassifier=strong | |||
|UniProt=P50222 | |UniProt=P50222 | ||
|association_with_transcript=71bp_to_NM_005924,uc003stc.2,uc011jxw.1_5end | |association_with_transcript=71bp_to_NM_005924,uc003stc.2,uc011jxw.1_5end | ||
|cluster_id=chr7:15726220..15726236,- | |||
|coexpression_cluster_id=C1990 | |||
|description=CAGE_peak_4_at_MEOX2_5end | |description=CAGE_peak_4_at_MEOX2_5end | ||
|id=chr7:15726220..15726236,- | |id=chr7:15726220..15726236,- | ||
|ontology_enrichment_celltype=CL:0000188!4.75e-09!9;CL:0005020!1.73e-07!6;CL:0002138!1.73e-07!6;CL:0005022!1.73e-07!6 | |ontology_enrichment_celltype=CL:0000188!4.75e-09!9;CL:0005020!1.73e-07!6;CL:0002138!1.73e-07!6;CL:0005022!1.73e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.17e-15;9!CL:0000135;9.30e-09;3!CL:0000388;9.30e-09;3!CL:0000594;9.05e-08;3!CL:0002618;9.05e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.42e-15,9;CL:0000135,9.01e-09,3;CL:0000388,9.01e-09,3;CL:0000594,6.71e-08,3;CL:0002618,7.37e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.24e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-18!115;UBERON:0002465!8.59e-09!10;UBERON:0001473!4.45e-07!8;UBERON:0004536!4.45e-07!8;UBERON:0006558!4.45e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.60e-22;16!UBERON:0002036;2.60e-22;16!UBERON:0002385;7.25e-10;31!UBERON:0001015;7.25e-10;31!UBERON:0000383;7.25e-10;31!UBERON:0007846;9.30e-09;3!UBERON:0000043;9.30e-09;3!UBERON:0007845;9.30e-09;3!UBERON:0011135;1.36e-07;5!UBERON:0002216;1.36e-07;5!UBERON:0011134;1.36e-07;5!UBERON:0002209;1.36e-07;5!UBERON:0002213;1.36e-07;5!UBERON:0007844;1.36e-07;5!UBERON:0011138;1.36e-07;5!UBERON:0001130;1.36e-07;5!UBERON:0001066;1.36e-07;5!UBERON:0001468;1.36e-07;5!UBERON:0002418;1.50e-07;3!UBERON:0004755;1.50e-07;3!UBERON:0003978;1.93e-07;3!UBERON:0000946;1.93e-07;3!UBERON:0004151;2.99e-07;3!UBERON:0004905;7.12e-07;8!UBERON:0000982;7.12e-07;8!UBERON:0004770;7.12e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.75e-09,114;UBERON:0007846,9.01e-09,3;UBERON:0000043,9.01e-09,3;UBERON:0007845,9.01e-09,3;UBERON:0003978,1.47e-07,3;UBERON:0009751,1.47e-07,3;UBERON:0000946,1.47e-07,3;UBERON:0002523,1.47e-07,3;UBERON:0005983,1.47e-07,3;UBERON:0002165,1.47e-07,3;UBERON:0002062,1.47e-07,3;UBERON:0007280,1.47e-07,3;UBERON:0011135,1.95e-07,5;UBERON:0002216,1.95e-07,5;UBERON:0011134,1.95e-07,5;UBERON:0002209,1.95e-07,5;UBERON:0002213,1.95e-07,5;UBERON:0005856,1.95e-07,5;UBERON:0005866,1.95e-07,5;UBERON:0005863,1.95e-07,5;UBERON:0007844,1.95e-07,5;UBERON:0011138,1.95e-07,5;UBERON:0001130,1.95e-07,5;UBERON:0001066,1.95e-07,5;UBERON:0001468,1.95e-07,5;UBERON:0002418,2.27e-07,3;UBERON:0004755,2.27e-07,3;UBERON:0004151,3.71e-07,3;UBERON:0004905,8.71e-07,8;UBERON:0000982,8.71e-07,8;UBERON:0004770,8.71e-07,8 | |||
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| ||
|short_description=p4@MEOX2 | |short_description=p4@MEOX2 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p4@MEOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEOX2_5end |
Coexpression cluster: | C1990_extraskeletal_lung_tenocyte_adipose_Nucleus_Endothelial_adrenal |
Association with transcript: | 71bp_to_NM_005924, uc003stc.2, uc011jxw.1_5end |
EntrezGene: | MEOX2 |
HGNC: | 7014 |
UniProt: | P50222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.42e-15 | 9 |
fibrocyte | 9.01e-09 | 3 |
tendon cell | 9.01e-09 | 3 |
skeletal muscle satellite cell | 6.71e-08 | 3 |
endothelial cell of umbilical vein | 7.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.75e-09 | 114 |
dense regular connective tissue | 9.01e-09 | 3 |
tendon | 9.01e-09 | 3 |
regular connective tissue | 9.01e-09 | 3 |
valve | 1.47e-07 | 3 |
cardiac mesenchyme | 1.47e-07 | 3 |
cardial valve | 1.47e-07 | 3 |
tunica intima | 1.47e-07 | 3 |
heart layer | 1.47e-07 | 3 |
endocardium | 1.47e-07 | 3 |
endocardial cushion | 1.47e-07 | 3 |
presumptive endocardium | 1.47e-07 | 3 |
intervertebral cartilage | 1.95e-07 | 5 |
symphysis | 1.95e-07 | 5 |
nonsynovial joint | 1.95e-07 | 5 |
fibrous joint | 1.95e-07 | 5 |
cartilaginous joint | 1.95e-07 | 5 |
developing mesenchymal condensation | 1.95e-07 | 5 |
pre-cartilage condensation | 1.95e-07 | 5 |
cartilaginous condensation | 1.95e-07 | 5 |
cartilage element | 1.95e-07 | 5 |
post-cranial axial skeletal system | 1.95e-07 | 5 |
vertebral column | 1.95e-07 | 5 |
intervertebral disk | 1.95e-07 | 5 |
intervertebral joint | 1.95e-07 | 5 |
cartilage tissue | 2.27e-07 | 3 |
skeletal tissue | 2.27e-07 | 3 |
cardiac chamber | 3.71e-07 | 3 |
articulation | 8.71e-07 | 8 |
skeletal joint | 8.71e-07 | 8 |
articular system | 8.71e-07 | 8 |