FFCP PHASE1:Hg19::chr12:133404969..133404985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2802 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4426 | |||
|TSSclassifier=strong | |||
|UniProt=Q08378 | |||
|association_with_transcript=302bp_to_ENST00000204726,NM_005895,uc001ukz.1,uc001ula.1_5end | |||
|cluster_id=chr12:133404969..133404985,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_11_at_GOLGA3_5end | |||
|id=chr12:133404969..133404985,- | |||
|ontology_enrichment_celltype=CL:0000557!2.19e-16!71;CL:0000839!1.55e-15!70;CL:0002009!1.60e-15!65;CL:0002194!4.34e-15!63;CL:0000576!4.34e-15!63;CL:0000040!4.34e-15!63;CL:0000559!4.34e-15!63;CL:0000766!2.25e-14!76;CL:0000763!7.39e-14!112;CL:0000049!7.39e-14!112;CL:0002057!1.10e-12!42;CL:0000860!2.81e-11!45;CL:0000738!2.14e-09!140;CL:0002032!1.55e-08!165;CL:0000837!1.55e-08!165;CL:0000037!1.66e-08!172;CL:0000566!1.66e-08!172;CL:0002031!1.85e-08!124;CL:0002087!6.77e-08!119;CL:0000988!1.18e-07!182;CL:0000990!2.78e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.49e-36;5!CL:0000990;2.29e-24;8!CL:0000235;1.80e-20;6!CL:0000451;5.27e-20;10!CL:0001014;4.85e-08;2!CL:0001016;4.85e-08;2!CL:0000473;3.38e-07;39!CL:0000234;3.38e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.50e-36,5;CL:0001029,2.50e-36,5;CL:0000990,2.30e-24,8;CL:0000235,1.86e-20,6;CL:0000451,5.28e-20,10;CL:0002009,1.95e-16,61;CL:0000557,6.62e-15,67;CL:0000763,1.78e-13,108;CL:0000049,1.78e-13,108;CL:0002194,1.98e-13,59;CL:0000576,1.98e-13,59;CL:0000040,1.98e-13,59;CL:0000559,1.98e-13,59;CL:0000839,6.00e-12,66;CL:0000766,6.66e-11,72;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161;CL:0000037,3.21e-08,168;CL:0001014,4.69e-08,2;CL:0001016,4.69e-08,2;CL:0002031,6.04e-08,120;CL:0000988,9.82e-08,177;CL:0000738,6.77e-07,136;CL:0000473,8.34e-07,48;CL:0000234,8.34e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.24e-13!80;UBERON:0001474!2.49e-11!86;UBERON:0002193!3.39e-11!112;UBERON:0002405!4.68e-11!115;UBERON:0002390!1.42e-10!102;UBERON:0003061!1.42e-10!102;UBERON:0004765!8.54e-10!101;UBERON:0001434!8.54e-10!101;UBERON:0002204!5.43e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.71e-13,76;UBERON:0001474,4.85e-12,82;UBERON:0004765,6.76e-11,90;UBERON:0002405,1.62e-10,93;UBERON:0002390,6.17e-10,98;UBERON:0003061,6.17e-10,98;UBERON:0001434,1.02e-09,100;UBERON:0003081,1.59e-09,203;UBERON:0002193,6.22e-09,108;UBERON:0002204,2.68e-08,167 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,1.16318591023652,1.13362783106643,0.485168122375632,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0.422510572623884,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,4.54366351116557,6.96518949197069,3.32394901297163,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,1.52054421143703,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0.300091096084402,0,0.772921620136887,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,1.23108503043699,3.7440682422278,0.445893486866185,0,0,0,0,0,0,0.985326475791887,0.264145302039678,0,0.288239906833923,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.496215615637554,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0,0.178064071293475,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,1.73986598415015,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,2.50634477090067,0,0,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0.335643173951685,0,0.158936578980379,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.484945082442097,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,2.92466059016951,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.366078794705889,0.250381861413,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.584580926518165,0.797189041880179,0.327130788511688,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0.365753774946808,0,0,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0.231522474323834,0,0,0,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.435433495793923,0,0.0673520530145875,0.286888821570705,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p11@GOLGA3 | |||
}} |
Latest revision as of 11:35, 17 September 2015
Short description: | p11@GOLGA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GOLGA3_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 302bp_to_ENST00000204726, NM_005895, uc001ukz.1, uc001ula.1_5end |
EntrezGene: | GOLGA3 |
HGNC: | 4426 |
UniProt: | Q08378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.50e-36 | 5 |
common dendritic progenitor | 2.50e-36 | 5 |
conventional dendritic cell | 2.30e-24 | 8 |
macrophage | 1.86e-20 | 6 |
dendritic cell | 5.28e-20 | 10 |
macrophage dendritic cell progenitor | 1.95e-16 | 61 |
granulocyte monocyte progenitor cell | 6.62e-15 | 67 |
myeloid cell | 1.78e-13 | 108 |
common myeloid progenitor | 1.78e-13 | 108 |
monopoietic cell | 1.98e-13 | 59 |
monocyte | 1.98e-13 | 59 |
monoblast | 1.98e-13 | 59 |
promonocyte | 1.98e-13 | 59 |
myeloid lineage restricted progenitor cell | 6.00e-12 | 66 |
myeloid leukocyte | 6.66e-11 | 72 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
hematopoietic stem cell | 3.21e-08 | 168 |
CD1a-positive Langerhans cell | 4.69e-08 | 2 |
immature CD1a-positive Langerhans cell | 4.69e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 6.04e-08 | 120 |
hematopoietic cell | 9.82e-08 | 177 |
leukocyte | 6.77e-07 | 136 |
defensive cell | 8.34e-07 | 48 |
phagocyte | 8.34e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.71e-13 | 76 |
bone element | 4.85e-12 | 82 |
skeletal element | 6.76e-11 | 90 |
immune system | 1.62e-10 | 93 |
hematopoietic system | 6.17e-10 | 98 |
blood island | 6.17e-10 | 98 |
skeletal system | 1.02e-09 | 100 |
lateral plate mesoderm | 1.59e-09 | 203 |
hemolymphoid system | 6.22e-09 | 108 |
musculoskeletal system | 2.68e-08 | 167 |