FFCP PHASE1:Hg19::chr10:21807175..21807210,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32697 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_uc010qcs.1_5end | |||
|cluster_id=chr10:21807175..21807210,- | |||
|description=CAGE_peak_1_at_C10orf140_5end | |||
|id=chr10:21807175..21807210,- | |||
|ontology_enrichment_celltype=CL:0000133!3.75e-11!59;CL:0002319!8.12e-10!25;CL:0000047!5.40e-07!8;CL:0000221!5.63e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.31e-14;25!CL:0002322;4.38e-09;5!CL:0000128;1.12e-08;7!CL:0000126;1.12e-08;7!CL:0000127;1.12e-08;7!CL:0002321;5.90e-08;15!CL:0000095;5.70e-07;17!CL:0000540;8.99e-07;6!CL:0000404;8.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.49e-17,59;CL:0002319,5.36e-14,25;CL:0000221,1.60e-12,72;CL:0000047,9.28e-10,8;CL:0000333,3.70e-09,41;CL:0002322,4.68e-09,5;CL:0000128,1.07e-08,7;CL:0000126,1.07e-08,7;CL:0000127,1.07e-08,7;CL:0002453,1.07e-08,7;CL:0000095,4.96e-07,17;CL:0000123,4.96e-07,17;CL:0000540,7.39e-07,6;CL:0000031,7.39e-07,6;CL:0000404,7.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000133;7.07e-09;59!UBERON:0003918;2.70e-07;10!UBERON:0007687;2.70e-07;10!CL:0000031;8.99e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!4.95e-08!22;DOID:2994!4.95e-08!22;DOID:171!8.44e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.79e-07;10!DOID:169;8.33e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.64e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.72e-23!94;UBERON:0001016!4.72e-23!94;UBERON:0001017!7.85e-22!82;UBERON:0005743!2.14e-21!86;UBERON:0000924!7.46e-20!173;UBERON:0006601!7.46e-20!173;UBERON:0002346!1.51e-18!90;UBERON:0004121!2.34e-18!169;UBERON:0001049!4.11e-17!57;UBERON:0005068!4.11e-17!57;UBERON:0006241!4.11e-17!57;UBERON:0007135!4.11e-17!57;UBERON:0003075!6.68e-17!86;UBERON:0007284!6.68e-17!86;UBERON:0002616!1.64e-16!59;UBERON:0000955!2.30e-16!69;UBERON:0006238!2.30e-16!69;UBERON:0003056!1.06e-13!61;UBERON:0003080!3.97e-13!42;UBERON:0002780!8.53e-13!41;UBERON:0001890!8.53e-13!41;UBERON:0006240!8.53e-13!41;UBERON:0000153!2.04e-12!129;UBERON:0007811!2.04e-12!129;UBERON:0000033!5.04e-12!123;UBERON:0007023!6.26e-12!115;UBERON:0000064!1.01e-11!219;UBERON:0002020!1.26e-11!34;UBERON:0003528!1.26e-11!34;UBERON:0001893!3.35e-11!34;UBERON:0001869!3.42e-11!32;UBERON:0002791!5.30e-11!33;UBERON:0000956!9.04e-10!25;UBERON:0000203!9.04e-10!25;UBERON:0001950!5.06e-08!20;UBERON:0000475!6.83e-08!365;UBERON:0002619!9.29e-08!22;UBERON:0000468!2.86e-07!659;UBERON:0000489!5.55e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.72e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-13,89;UBERON:0004121,1.17e-12,171;UBERON:0000924,1.17e-12,171;UBERON:0006601,1.17e-12,171;UBERON:0001017,4.63e-11,81;UBERON:0002346,1.50e-09,86;UBERON:0001049,8.91e-09,56;UBERON:0005068,8.91e-09,56;UBERON:0006241,8.91e-09,56;UBERON:0007135,8.91e-09,56;UBERON:0003075,1.10e-08,82;UBERON:0007284,1.10e-08,82;UBERON:0000073,1.32e-08,53;UBERON:0002616,1.32e-08,53;UBERON:0010371,2.36e-08,104;UBERON:0003056,1.70e-07,61;UBERON:0010314,2.28e-07,132;UBERON:0000955,7.62e-07,68;UBERON:0006238,7.62e-07,68 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0.873765488520689,1.84636884759917,0,0,0,0,0,0,6.64853713614655,2.85600967741954,5.32873026512749,8.01460763966959,6.43309797842556,6.52821725892975,0,0,0,0,0,0.309632246632152,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,3.02511414925017,1.77383517970051,1.66886092816939,0.589405839739707,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,0.908144565869588,0.576175924479999,0.234321431833797,0,0,0,0.704606991862589,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0.309157587715317,0,0,0,0.194874010322397,0.757301322732344,1.56484827691909,0.484938170456436,0,0.604512589365842,0.339121184620975,0,0,0,5.3668430697022,3.04818467139416,9.17932148669195,19.1772951778435,5.80337957013945,0.72995471815166,0,2.57296375277154,1.38134921352481,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,5.33279862885353,0.70445216541493,1.58803092537181,0.462985512576611,0.951270761172991,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.784917590417525,4.3596006883328,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0,1.62786481617433,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,7.8083912314573,6.95959931499926,4.85797169469611,14.6725912880228,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,2.36553622550902,1.63997980989798,0.300946099727719,0,0,0,0,1.12948698808508,0.587403472388222,0.686286847621712,0,0,0,0,0,0.907170879989041,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0.902399225814824,0.693138033939733,2.35304930753057,0,0.949964660035881,0,0,0.215915916102139,1.54227252690289,1.08378575017541,3.51182841698397,0,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,1.03041011647722,3.84591752237042,1.40266149865,0,0,0,0.096670718292122,0.616194468458578,1.38153307253517,0.137836572484531,0.537101224341368,0.580066775656914,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.767693373934002,1.28381696410176,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,7.05038869441323,17.3246373947405,0.735120647943095,1.11481905075431,0,0,0.159426272728822,0,0,9.73698480529861,0,19.6558024679421,0.228234679033192,0,2.50634477090067,0,0,0,50.2498560474585,0,19.3561681514329,23.4859913287037,22.0240867059719,0,0,0,0,0,0,0,0,7.28163130497081,0,0.284136146806413,2.14870036263921,3.8605408508243,3.68592842519078,0.994147647766298,0.422008249231538,0,0.16480387422676,82.5500345780454,1.19548792950642,0,0.755798243562828,0.306806047506464,0,0,0,0,0,0.295930216910801,0,0,0,0.463840490809256,0,0.7812832832557,0,0.724999575434793,0,0.254253650292766,5.43691668066254,3.44743373241465,2.91604613383254,0.520874984799877,1.77148277162768,0.964771509003264,0,0.995213339381022,1.47773809476774,0.438770794307945,0.32681539055697,0,0.384751292518985,0,0,3.68006342080066,0.108647371922008,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0.802577647298789,0.702793337176017,0,0,0,0,0,3.67287313956588,0.31593289814244,3.45743864653333,1.9700756365477,0,0,0,0,1.99226682220855,0.138674673013139,0.173559738335131,0.587954384486266,0.174118413160805,0.34945333648406,0,0,0.65780385377567,0.0821154570532092,0.290967049465258,0,2.25980740780532,0,0,0.633107959558787,0.977756913674015,0,0.213452994739353,0.19980960958213,0,11.9118060012552,5.49103993158287,0,0,0.471388069233591,1.9026588850306,0.418411385249333,0.203996435272644,0,0,0.410716136675979,0,0.859530882839914,0,0.837847203816763,0.458320848023367,0,0.998395002494955,2.14613024068285,0.89268582976749,1.14211903227435,0,0,0,0,0,2.55911451938347,0,0,0.953423842781029,0.964518890790115,1.92555211236127,2.07720169014593,0,0.77380195455795,0.668245123238271,0,1.49730843868477,5.4028225779048,2.42880773994635,0.717149357331379,0,0.714695326373367,2.64836788146173,14.239038108666,1.62899880526114,0,2.93928624098468,0,0,0.170388021785422,0,0.293104467356165,1.32506888912221,1.0342636508924,0.39669780522807,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0.886068179966986,1.22026264901963,1.502291168478,0.573409195690071,1.10929051536852,0.372578417648301,26.977983812565,0,0,0,0,3.27834434064817,3.18826262943815,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,2.19284049578707,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,5.24366922344972,3.12691953050377,4.2461804301092,8.29993250259306,0.509197589862076,2.33832412111851,0.495743057036009,0.558644917973244,0,0.0788617450012534,2.40171224485641,0,0,0.770750701157514,0,2.07524016774297,1.02558182120378,5.04143392443436,0.829887029570615,1.13032951942296,1.42769420259154,0.490738592505128,0,0,0,0,0,0.397832444232549,0.601682626794058,1.21023041222112,0,0.261906694481422,0,0.295712172434091,0.405225507710368,0.781078098613847,1.44680757550829,0.570742291745161,12.0334457984008,1.64477330057155,0,7.03484977438482,0,17.1424587481052,15.4690512220659,1.21393120847326,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.328863867814245,0.709163045303809,0.556157009460346,0.235479278551542,1.09980912941201,3.92381028639305,0.913158720509496,0,0,1.57248397188644,0.316027223465453,9.99676258165877,0.695433089210318,0.801711364730253,0.62164849248911,0.51215543128185,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,2.98426162742052,26.7570204249529,0.11294608203896,8.90518185637976,0.452888530700021,0,0.874238242015829,0,0.245148321753905,1.17838273550813,0.588925401344836,0,2.9585900930838,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,17.985958090023,0.611923411718232,3.9271562130634,0,0.371995018166751,0,0,2.52332849670158,2.07604586731021,1.90047751517155,0.101988829741982,0.801652215796681,0.0918948995348449,0.250707539292375,0.227336094654718,0.803892390468535,0,0.103432995861895,0.639701945702943,4.04709533488359,0.258355639344024,0.248298857183432,0,2.92776928079559,3.03175783437329,0.217716747896961,1.71116650542641,0.0673520530145875,0.215166616178029,0.332660356546013,0.162806537221949,0,0,0,0,0.366724332548599,4.88275413978886,0,0.603821380773079,0 | |||
|short_description=p1@C10orf140 | |||
}} |
Latest revision as of 14:04, 17 September 2015
Short description: | p1@C10orf140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C10orf140_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_uc010qcs.1_5end |
EntrezGene: | C10orf140 |
HGNC: | 32697 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.49e-17 | 59 |
neural cell | 5.36e-14 | 25 |
ectodermal cell | 1.60e-12 | 72 |
neuronal stem cell | 9.28e-10 | 8 |
migratory neural crest cell | 3.70e-09 | 41 |
embryonic stem cell | 4.68e-09 | 5 |
oligodendrocyte | 1.07e-08 | 7 |
macroglial cell | 1.07e-08 | 7 |
astrocyte | 1.07e-08 | 7 |
oligodendrocyte precursor cell | 1.07e-08 | 7 |
neuron associated cell | 4.96e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.96e-07 | 17 |
neuron | 7.39e-07 | 6 |
neuroblast | 7.39e-07 | 6 |
electrically signaling cell | 7.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.16e-13 | 89 |
ectoderm-derived structure | 1.17e-12 | 171 |
ectoderm | 1.17e-12 | 171 |
presumptive ectoderm | 1.17e-12 | 171 |
central nervous system | 4.63e-11 | 81 |
neurectoderm | 1.50e-09 | 86 |
neural tube | 8.91e-09 | 56 |
neural rod | 8.91e-09 | 56 |
future spinal cord | 8.91e-09 | 56 |
neural keel | 8.91e-09 | 56 |
neural plate | 1.10e-08 | 82 |
presumptive neural plate | 1.10e-08 | 82 |
regional part of nervous system | 1.32e-08 | 53 |
regional part of brain | 1.32e-08 | 53 |
ecto-epithelium | 2.36e-08 | 104 |
pre-chordal neural plate | 1.70e-07 | 61 |
structure with developmental contribution from neural crest | 2.28e-07 | 132 |
brain | 7.62e-07 | 68 |
future brain | 7.62e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.64e-07 | 10 |