FFCP PHASE1:Hg19::chr1:156119979..156120000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64218 | |EntrezGene=64218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |HGNC=10729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000485575_5end | |association_with_transcript=0bp_to_ENST00000485575_5end | ||
|cluster_id=chr1:156119979..156120000,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_8_at_SEMA4A_5end | |description=CAGE_peak_8_at_SEMA4A_5end | ||
|id=chr1:156119979..156120000,+ | |id=chr1:156119979..156120000,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.24e-16!5;CL:0000047!3.29e-09!8;CL:0000540!3.73e-08!6;CL:0000031!3.73e-08!6;CL:0000404!3.73e-08!6;CL:0000039!3.15e-07!7;CL:0000586!3.15e-07!7 | |ontology_enrichment_celltype=CL:0002322!3.24e-16!5;CL:0000047!3.29e-09!8;CL:0000540!3.73e-08!6;CL:0000031!3.73e-08!6;CL:0000404!3.73e-08!6;CL:0000039!3.15e-07!7;CL:0000586!3.15e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.74e-45;5!CL:0002321;6.79e-15;15!CL:0000039;4.01e-12;7!CL:0000586;4.01e-12;7!CL:0000148;1.23e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.17e-45,5;CL:0000039,4.16e-12,7;CL:0000586,4.16e-12,7;CL:0000047,3.50e-10,8;CL:0000148,1.27e-08,10;CL:0000541,1.27e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.23e-08;10!UBERON:0005564;1.23e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;7.22e-10;1!DOID:0050177;7.22e-10;1!DOID:0050427;7.22e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.24e-10,1;DOID:0050177,8.24e-10,1;DOID:0050427,8.24e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;5.77e-20;4!UBERON:0002435;5.77e-20;4!UBERON:0000204;5.77e-20;4!UBERON:0009663;7.54e-20;7!UBERON:0002420;1.69e-15;9!UBERON:0000125;1.69e-15;9!UBERON:0007245;1.69e-15;9!UBERON:0002308;1.69e-15;9!UBERON:0010009;1.69e-15;9!UBERON:0010011;1.69e-15;9!UBERON:0000454;1.69e-15;9!UBERON:0000922;2.66e-14;49!UBERON:0005383;1.59e-12;3!UBERON:0005382;1.59e-12;3!UBERON:0002791;4.45e-11;32!UBERON:0000473;1.13e-10;8!UBERON:0001869;1.93e-10;32!UBERON:0003528;2.45e-10;34!UBERON:0002020;2.45e-10;34!UBERON:0001874;3.55e-10;1!UBERON:0001882;7.22e-10;1!UBERON:0002022;7.22e-10;1!UBERON:0003112;7.22e-10;1!UBERON:0011158;7.22e-10;1!UBERON:0003128;7.22e-10;1!UBERON:0005403;7.22e-10;1!UBERON:0001703;7.22e-10;1!UBERON:0002241;7.22e-10;1!UBERON:0001893;2.51e-08;34!UBERON:0003135;6.83e-08;11!UBERON:0002780;7.49e-08;41!UBERON:0001890;7.49e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.37e-20,4;UBERON:0002435,6.37e-20,4;UBERON:0000204,6.37e-20,4;UBERON:0010082,6.37e-20,4;UBERON:0009663,1.01e-19,7;UBERON:0002420,2.12e-15,9;UBERON:0000125,2.12e-15,9;UBERON:0007245,2.12e-15,9;UBERON:0002308,2.12e-15,9;UBERON:0010009,2.12e-15,9;UBERON:0010011,2.12e-15,9;UBERON:0000454,2.12e-15,9;UBERON:0005383,1.26e-12,3;UBERON:0005382,1.26e-12,3;UBERON:0002791,5.16e-12,32;UBERON:0001869,5.16e-12,32;UBERON:0003528,2.76e-11,34;UBERON:0002020,2.76e-11,34;UBERON:0001893,2.76e-11,34;UBERON:0000473,1.17e-10,8;UBERON:0001874,3.10e-10,1;UBERON:0003112,7.55e-10,1;UBERON:0011158,7.55e-10,1;UBERON:0003128,7.55e-10,1;UBERON:0001703,7.55e-10,1;UBERON:0002241,7.55e-10,1;UBERON:0004761,7.55e-10,1;UBERON:0009617,7.55e-10,1;UBERON:0002022,9.82e-10,1;UBERON:0001882,1.17e-09,1;UBERON:0005403,1.17e-09,1;UBERON:0002780,2.78e-09,41;UBERON:0001890,2.78e-09,41;UBERON:0003080,2.78e-09,41;UBERON:0006240,2.78e-09,41;UBERON:0001017,8.81e-09,81;UBERON:0003135,6.99e-08,11;UBERON:0001016,8.95e-08,89;UBERON:0000073,4.70e-07,53;UBERON:0002616,4.70e-07,53 | |||
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|short_description=p8@SEMA4A | |short_description=p8@SEMA4A | ||
}} | }} |
Latest revision as of 15:13, 17 September 2015
Short description: | p8@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SEMA4A_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000485575_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.17e-45 | 5 |
germ line cell | 4.16e-12 | 7 |
germ cell | 4.16e-12 | 7 |
neuronal stem cell | 3.50e-10 | 8 |
melanocyte | 1.27e-08 | 10 |
melanoblast | 1.27e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.24e-10 | 1 |
monogenic disease | 8.24e-10 | 1 |
xeroderma pigmentosum | 8.24e-10 | 1 |