FFCP PHASE1:Hg19::chr19:38916822..38916833,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115727 | |EntrezGene=115727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18958 | |HGNC=18958 | ||
|TSSclassifier=strong | |||
|UniProt=C0LTP7,C0LTP6,C0LTP5,C0LTP2,Q8TDF6,C0LTP3,C0LTP4 | |UniProt=C0LTP7,C0LTP6,C0LTP5,C0LTP2,Q8TDF6,C0LTP3,C0LTP4 | ||
|association_with_transcript=111bp_to_ENST00000293062,ENST00000405332,ENST00000426920,ENST00000433821,ENST00000454404,NM_001146202,NM_001146203,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_170604,uc002oir.2,uc010egb.2,uc010xua.1,uc010xub.1,uc010xuc.1,uc010xud.1,uc010xue.1_5end | |association_with_transcript=111bp_to_ENST00000293062,ENST00000405332,ENST00000426920,ENST00000433821,ENST00000454404,NM_001146202,NM_001146203,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_170604,uc002oir.2,uc010egb.2,uc010xua.1,uc010xub.1,uc010xuc.1,uc010xud.1,uc010xue.1_5end | ||
|cluster_id=chr19:38916822..38916833,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_RASGRP4_5end | |description=CAGE_peak_3_at_RASGRP4_5end | ||
|id=chr19:38916822..38916833,- | |id=chr19:38916822..38916833,- | ||
|ontology_enrichment_celltype=CL:0000763!8.45e-65!112;CL:0000049!8.45e-65!112;CL:0000766!6.13e-60!76;CL:0000037!9.91e-52!172;CL:0000566!9.91e-52!172;CL:0000988!2.18e-49!182;CL:0002032!2.63e-49!165;CL:0000837!2.63e-49!165;CL:0000557!2.57e-48!71;CL:0000839!1.56e-47!70;CL:0002194!1.80e-43!63;CL:0000576!1.80e-43!63;CL:0000040!1.80e-43!63;CL:0000559!1.80e-43!63;CL:0002009!2.81e-43!65;CL:0000738!9.68e-43!140;CL:0002057!6.21e-42!42;CL:0000860!3.95e-38!45;CL:0002031!8.90e-32!124;CL:0002087!5.25e-30!119;CL:0002393!7.55e-13!9;CL:0002397!7.55e-13!9;CL:0000094!8.88e-12!8;CL:0000134!1.50e-09!358;CL:0002320!6.74e-09!365;CL:0000081!5.90e-08!11;CL:0002274!1.28e-07!5;CL:0000457!1.28e-07!5;CL:0002191!1.28e-07!5;CL:0000097!1.28e-07!5;CL:0000831!1.28e-07!5;CL:0002028!1.28e-07!5;CL:0000219!2.50e-07!390 | |ontology_enrichment_celltype=CL:0000763!8.45e-65!112;CL:0000049!8.45e-65!112;CL:0000766!6.13e-60!76;CL:0000037!9.91e-52!172;CL:0000566!9.91e-52!172;CL:0000988!2.18e-49!182;CL:0002032!2.63e-49!165;CL:0000837!2.63e-49!165;CL:0000557!2.57e-48!71;CL:0000839!1.56e-47!70;CL:0002194!1.80e-43!63;CL:0000576!1.80e-43!63;CL:0000040!1.80e-43!63;CL:0000559!1.80e-43!63;CL:0002009!2.81e-43!65;CL:0000738!9.68e-43!140;CL:0002057!6.21e-42!42;CL:0000860!3.95e-38!45;CL:0002031!8.90e-32!124;CL:0002087!5.25e-30!119;CL:0002393!7.55e-13!9;CL:0002397!7.55e-13!9;CL:0000094!8.88e-12!8;CL:0000134!1.50e-09!358;CL:0002320!6.74e-09!365;CL:0000081!5.90e-08!11;CL:0002274!1.28e-07!5;CL:0000457!1.28e-07!5;CL:0002191!1.28e-07!5;CL:0000097!1.28e-07!5;CL:0000831!1.28e-07!5;CL:0002028!1.28e-07!5;CL:0000219!2.50e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.50e-39;48!CL:0000860;3.99e-38;33!CL:0002057;3.99e-38;33!CL:0000766;3.91e-35;69!CL:0000473;3.56e-30;39!CL:0000234;3.56e-30;39!CL:0000763;1.70e-22;100!CL:0000094;1.22e-18;8!CL:0002393;1.65e-17;6!CL:0002397;1.65e-17;6!CL:0000097;2.02e-14;5!CL:0000081;3.14e-13;11!CL:0002087;6.63e-12;104!CL:0000738;4.63e-11;136!CL:0000775;1.07e-10;3!CL:0000875;4.85e-10;3!CL:0002396;4.85e-10;3!CL:0000226;5.29e-09;3!CL:0000842;5.29e-09;3!CL:0000988;1.54e-08;177!CL:0000163;7.47e-08;9!CL:0000771;2.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.21e-77,72;CL:0000860,9.43e-66,42;CL:0002057,9.43e-66,42;CL:0000763,4.47e-65,108;CL:0000049,4.47e-65,108;CL:0000473,3.47e-60,48;CL:0000234,3.47e-60,48;CL:0000839,1.67e-58,66;CL:0000557,1.74e-57,67;CL:0002194,1.98e-49,59;CL:0000576,1.98e-49,59;CL:0000040,1.98e-49,59;CL:0000559,1.98e-49,59;CL:0000037,5.76e-48,168;CL:0002009,1.59e-47,61;CL:0000738,8.46e-47,136;CL:0000988,7.87e-45,177;CL:0002032,8.46e-45,161;CL:0000837,8.46e-45,161;CL:0002031,1.06e-32,120;CL:0002087,1.37e-30,115;CL:0002393,7.62e-26,9;CL:0002397,7.62e-26,9;CL:0000094,1.03e-18,8;CL:0000134,1.72e-15,354;CL:0002320,6.38e-15,361;CL:0000097,1.36e-14,5;CL:0002028,1.36e-14,5;CL:0000081,2.80e-13,11;CL:0000219,6.37e-13,386;CL:0000775,1.04e-10,3;CL:0000048,1.73e-10,427;CL:0000034,2.39e-10,441;CL:0000723,3.74e-10,433;CL:0000875,4.80e-10,3;CL:0002396,4.80e-10,3;CL:0000226,7.74e-09,3;CL:0000842,7.74e-09,3;CL:0000163,6.06e-08,9;CL:0000771,2.05e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-47;42!CL:0000049;1.64e-18;108 | |||
|ontology_enrichment_disease=DOID:8692!9.01e-12!31;DOID:1240!2.98e-09!39 | |ontology_enrichment_disease=DOID:8692!9.01e-12!31;DOID:1240!2.98e-09!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-58!102;UBERON:0003061!1.97e-58!102;UBERON:0002193!6.54e-54!112;UBERON:0002371!2.90e-42!80;UBERON:0001474!6.94e-38!86;UBERON:0002405!1.09e-30!115;UBERON:0004765!2.83e-29!101;UBERON:0001434!2.83e-29!101;UBERON:0003081!1.74e-18!216;UBERON:0000178!1.12e-16!15;UBERON:0000179!1.12e-16!15;UBERON:0000463!1.12e-16!15;UBERON:0002204!1.24e-11!167;UBERON:0007023!9.75e-10!115;UBERON:0002384!2.24e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.97e-58!102;UBERON:0003061!1.97e-58!102;UBERON:0002193!6.54e-54!112;UBERON:0002371!2.90e-42!80;UBERON:0001474!6.94e-38!86;UBERON:0002405!1.09e-30!115;UBERON:0004765!2.83e-29!101;UBERON:0001434!2.83e-29!101;UBERON:0003081!1.74e-18!216;UBERON:0000178!1.12e-16!15;UBERON:0000179!1.12e-16!15;UBERON:0000463!1.12e-16!15;UBERON:0002204!1.24e-11!167;UBERON:0007023!9.75e-10!115;UBERON:0002384!2.24e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.52e-27;15!UBERON:0000179;1.52e-27;15!UBERON:0000463;1.52e-27;15!UBERON:0002390;7.69e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.00e-68,98;UBERON:0003061,6.00e-68,98;UBERON:0002193,1.64e-60,108;UBERON:0002371,1.68e-49,76;UBERON:0001474,3.82e-45,82;UBERON:0004765,3.12e-40,90;UBERON:0002405,1.32e-38,93;UBERON:0001434,3.43e-35,100;UBERON:0003081,1.45e-27,203;UBERON:0000178,2.08e-27,15;UBERON:0000179,2.08e-27,15;UBERON:0000463,2.08e-27,15;UBERON:0002204,5.20e-17,167;UBERON:0002384,3.80e-14,371;UBERON:0000926,3.15e-13,315;UBERON:0004120,3.15e-13,315;UBERON:0006603,3.15e-13,315 | |||
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|short_description=p3@RASGRP4 | |short_description=p3@RASGRP4 | ||
}} | }} |
Latest revision as of 19:43, 17 September 2015
Short description: | p3@RASGRP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RASGRP4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 111bp_to_ENST00000293062, ENST00000405332, ENST00000426920, ENST00000433821, ENST00000454404, NM_001146202, NM_001146203, NM_001146204, NM_001146205, NM_001146206, NM_001146207, NM_170604, uc002oir.2, uc010egb.2, uc010xua.1, uc010xub.1, uc010xuc.1, uc010xud.1, uc010xue.1_5end |
EntrezGene: | RASGRP4 |
HGNC: | 18958 |
UniProt: | C0LTP7C0LTP6C0LTP5C0LTP2Q8TDF6C0LTP3C0LTP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.00e-68 | 98 |
blood island | 6.00e-68 | 98 |
hemolymphoid system | 1.64e-60 | 108 |
bone marrow | 1.68e-49 | 76 |
bone element | 3.82e-45 | 82 |
skeletal element | 3.12e-40 | 90 |
immune system | 1.32e-38 | 93 |
skeletal system | 3.43e-35 | 100 |
lateral plate mesoderm | 1.45e-27 | 203 |
blood | 2.08e-27 | 15 |
haemolymphatic fluid | 2.08e-27 | 15 |
organism substance | 2.08e-27 | 15 |
musculoskeletal system | 5.20e-17 | 167 |
connective tissue | 3.80e-14 | 371 |
mesoderm | 3.15e-13 | 315 |
mesoderm-derived structure | 3.15e-13 | 315 |
presumptive mesoderm | 3.15e-13 | 315 |