FFCP PHASE1:Hg19::chr3:27762020..27762023,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3372 | |||
|TSSclassifier=strong | |||
|UniProt=O95936 | |||
|association_with_transcript=-209bp_to_BC025363_5end | |||
|cluster_id=chr3:27762020..27762023,- | |||
|description=CAGE_peak_5_at_EOMES_5end | |||
|id=chr3:27762020..27762023,- | |||
|ontology_enrichment_celltype=CL:0000838!1.17e-12!52;CL:0000542!2.54e-12!53;CL:0000051!2.54e-12!53;CL:0002031!9.51e-11!124;CL:0002087!1.54e-10!119;CL:0000738!2.58e-10!140;CL:0000084!6.90e-10!25;CL:0000827!6.90e-10!25;CL:0000623!2.62e-08!3;CL:0000825!2.62e-08!3;CL:0002032!3.51e-08!165;CL:0000837!3.51e-08!165;CL:0000791!4.87e-08!18;CL:0000789!4.87e-08!18;CL:0002420!4.87e-08!18;CL:0002419!4.87e-08!18;CL:0000790!4.87e-08!18;CL:0000037!1.59e-07!172;CL:0000566!1.59e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.98e-16;1!CL:0000911;5.98e-16;1!CL:0000814;5.98e-16;1!CL:0000791;5.86e-13;18!CL:0000789;5.86e-13;18!CL:0002419;5.86e-13;18!CL:0000625;3.51e-12;11!CL:0000084;2.09e-09;25!CL:0000542;4.04e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.44e-16,1;CL:0000914,6.44e-16,1;CL:0000911,6.44e-16,1;CL:0000814,6.44e-16,1;CL:0002042,6.44e-16,1;CL:0002039,6.44e-16,1;CL:0002040,6.44e-16,1;CL:0002041,6.44e-16,1;CL:0000791,5.10e-13,18;CL:0000789,5.10e-13,18;CL:0002420,5.10e-13,18;CL:0002419,5.10e-13,18;CL:0000790,5.10e-13,18;CL:0000838,6.05e-13,52;CL:0000542,1.08e-12,53;CL:0000051,1.08e-12,53;CL:0000625,2.90e-12,11;CL:0000084,1.89e-09,25;CL:0000827,1.89e-09,25;CL:0000893,1.29e-08,2;CL:0002489,1.29e-08,2;CL:0000809,1.29e-08,2;CL:0000808,1.29e-08,2;CL:0000894,1.29e-08,2;CL:0000806,1.29e-08,2;CL:0000807,1.29e-08,2;CL:0000805,1.29e-08,2;CL:0002425,1.29e-08,2;CL:0000738,1.75e-07,136;CL:0002087,4.08e-07,115;CL:0002031,8.66e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.78e-15;1!CL:0000790;5.86e-13;18!CL:0002425;1.24e-08;2!CL:0000051;4.04e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.78e-15;1!UBERON:0001785;1.78e-15;1!UBERON:0002464;1.78e-15;1!UBERON:0004904;1.78e-15;1!UBERON:0001021;1.78e-15;1!UBERON:0003714;2.15e-08;2!UBERON:0005162;2.15e-08;2!UBERON:0000122;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.54e-15,1;UBERON:0001785,1.54e-15,1;UBERON:0002464,1.54e-15,1;UBERON:0004904,1.54e-15,1;UBERON:0001021,1.54e-15,1;UBERON:0003902,1.54e-15,1;UBERON:0005425,1.54e-15,1;UBERON:0003714,2.00e-08,2;UBERON:0005162,2.00e-08,2;UBERON:0000122,2.00e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,1.45185470921107,1.88831355734875,1.02324015707783,0,1.15148819429164,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,1.00499466102697,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,1.20964045934839,1.87208137048455,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15591662370225,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0.844501632511974,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0.886642856860642,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.0730893170861856,0,0,0.529536760149002,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0.423366660328922,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,5.57473404450323,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@EOMES | |||
}} |
Latest revision as of 21:15, 17 September 2015
Short description: | p5@EOMES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EOMES_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_BC025363_5end |
EntrezGene: | EOMES |
HGNC: | 3372 |
UniProt: | O95936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.44e-16 | 1 |
immature NK T cell | 6.44e-16 | 1 |
effector T cell | 6.44e-16 | 1 |
mature NK T cell | 6.44e-16 | 1 |
immature NK T cell stage IV | 6.44e-16 | 1 |
immature NK T cell stage I | 6.44e-16 | 1 |
immature NK T cell stage II | 6.44e-16 | 1 |
immature NK T cell stage III | 6.44e-16 | 1 |
mature alpha-beta T cell | 5.10e-13 | 18 |
alpha-beta T cell | 5.10e-13 | 18 |
immature T cell | 5.10e-13 | 18 |
mature T cell | 5.10e-13 | 18 |
immature alpha-beta T cell | 5.10e-13 | 18 |
lymphoid lineage restricted progenitor cell | 6.05e-13 | 52 |
lymphocyte | 1.08e-12 | 53 |
common lymphoid progenitor | 1.08e-12 | 53 |
CD8-positive, alpha-beta T cell | 2.90e-12 | 11 |
T cell | 1.89e-09 | 25 |
pro-T cell | 1.89e-09 | 25 |
thymocyte | 1.29e-08 | 2 |
double negative thymocyte | 1.29e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.29e-08 | 2 |
DN4 thymocyte | 1.29e-08 | 2 |
DN1 thymic pro-T cell | 1.29e-08 | 2 |
DN2 thymocyte | 1.29e-08 | 2 |
DN3 thymocyte | 1.29e-08 | 2 |
immature single positive thymocyte | 1.29e-08 | 2 |
early T lineage precursor | 1.29e-08 | 2 |
leukocyte | 1.75e-07 | 136 |
nongranular leukocyte | 4.08e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 8.66e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.54e-15 | 1 |
cranial nerve | 1.54e-15 | 1 |
nerve trunk | 1.54e-15 | 1 |
nerve connecting eye with brain | 1.54e-15 | 1 |
nerve | 1.54e-15 | 1 |
retinal neural layer | 1.54e-15 | 1 |
presumptive neural retina | 1.54e-15 | 1 |
neural tissue | 2.00e-08 | 2 |
multi cell component structure | 2.00e-08 | 2 |
neuron projection bundle | 2.00e-08 | 2 |