FFCP PHASE1:Hg19::chr6:31554779..31554804,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=strong | |||
|UniProt=Q5STB1,Q5STA6 | |||
|association_with_transcript=0bp_to_ENST00000376090,ENST00000396107,ENST00000396114_5end | |||
|cluster_id=chr6:31554779..31554804,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_LST1_5end | |||
|id=chr6:31554779..31554804,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.26e-68!172;CL:0000566!7.26e-68!172;CL:0002032!7.52e-64!165;CL:0000837!7.52e-64!165;CL:0000988!7.71e-61!182;CL:0000738!4.93e-59!140;CL:0000763!5.84e-56!112;CL:0000049!5.84e-56!112;CL:0002031!1.92e-48!124;CL:0002087!7.03e-48!119;CL:0000766!1.82e-47!76;CL:0000557!1.81e-43!71;CL:0002009!7.31e-43!65;CL:0002194!5.98e-41!63;CL:0000576!5.98e-41!63;CL:0000040!5.98e-41!63;CL:0000559!5.98e-41!63;CL:0000839!2.92e-40!70;CL:0002057!1.68e-37!42;CL:0000860!1.65e-33!45;CL:0002393!2.22e-09!9;CL:0002397!2.22e-09!9;CL:0000838!4.76e-09!52;CL:0000134!5.27e-09!358;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0002320!4.07e-08!365;CL:0000451!4.60e-08!10;CL:0000094!3.53e-07!8;CL:0000990!6.37e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.06e-32;33!CL:0002057;6.06e-32;33!CL:0000473;4.67e-31;39!CL:0000234;4.67e-31;39!CL:0000576;8.00e-31;48!CL:0000766;8.81e-24;69!CL:0000763;6.68e-20;100!CL:0000738;1.62e-14;136!CL:0002087;5.78e-13;104!CL:0000988;3.01e-11;177!CL:0000451;2.07e-09;10!CL:0000094;2.76e-08;8!CL:0000990;4.61e-08;8!CL:0002393;1.21e-07;6!CL:0002397;1.21e-07;6!CL:0000840;9.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.32e-69,168;CL:0000763,1.58e-67,108;CL:0000049,1.58e-67,108;CL:0002032,7.45e-65,161;CL:0000837,7.45e-65,161;CL:0000988,1.07e-63,177;CL:0000738,6.43e-59,136;CL:0000766,1.31e-57,72;CL:0002009,2.35e-57,61;CL:0002194,5.41e-55,59;CL:0000576,5.41e-55,59;CL:0000040,5.41e-55,59;CL:0000559,5.41e-55,59;CL:0000557,8.90e-53,67;CL:0000473,4.06e-50,48;CL:0000234,4.06e-50,48;CL:0002087,1.44e-49,115;CL:0000839,6.58e-48,66;CL:0002031,6.52e-46,120;CL:0000860,8.36e-45,42;CL:0002057,8.36e-45,42;CL:0000134,1.87e-12,354;CL:0002320,1.55e-11,361;CL:0002393,5.87e-11,9;CL:0002397,5.87e-11,9;CL:0000451,2.23e-09,10;CL:0000219,1.91e-08,386;CL:0000094,2.57e-08,8;CL:0000990,5.21e-08,8;CL:0000840,9.09e-07,5;CL:0001029,9.09e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.26e-32;42!CL:0000049;3.96e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!7.56e-09!31;DOID:1240!8.76e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.11e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.15e-11,31;DOID:1240,4.25e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.14e-45!102;UBERON:0003061!7.14e-45!102;UBERON:0002193!1.35e-42!112;UBERON:0002371!1.12e-36!80;UBERON:0001474!5.37e-32!86;UBERON:0002405!9.72e-29!115;UBERON:0007023!1.92e-28!115;UBERON:0004765!2.04e-24!101;UBERON:0001434!2.04e-24!101;UBERON:0003081!1.08e-10!216;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002780!3.85e-08!41;UBERON:0001890!3.85e-08!41;UBERON:0006240!3.85e-08!41;UBERON:0003080!9.82e-08!42;UBERON:0002204!1.02e-07!167;UBERON:0001893!2.04e-07!34;UBERON:0002020!2.15e-07!34;UBERON:0003528!2.15e-07!34;UBERON:0002384!3.05e-07!375;UBERON:0002791!3.36e-07!33;UBERON:0000178!6.05e-07!15;UBERON:0000179!6.05e-07!15;UBERON:0000463!6.05e-07!15;UBERON:0002616!7.20e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-08;15!UBERON:0000179;2.08e-08;15!UBERON:0000463;2.08e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-54,98;UBERON:0003061,2.15e-54,98;UBERON:0002193,2.26e-50,108;UBERON:0002371,2.97e-45,76;UBERON:0002405,2.85e-42,93;UBERON:0001474,4.90e-40,82;UBERON:0004765,3.33e-34,90;UBERON:0001434,2.69e-28,100;UBERON:0003081,3.59e-17,203;UBERON:0007023,3.91e-16,114;UBERON:0002384,1.13e-10,371;UBERON:0002204,2.73e-09,167;UBERON:0000178,2.11e-08,15;UBERON:0000179,2.11e-08,15;UBERON:0000463,2.11e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,1.57421562627358,97.1609763816793,37.2314516154296,98.4630544290243,0,0,0,0,0.284338464974843,27.3048408581408,67.587439840889,56.55353418658,76.170815621264,14.1066748771152,5.83008598834163,9.5302960024649,96.1082358332923,90.3123505416254,89.0283504559285,96.2256212789534,93.3351105809544,105.60987247523,107.884647120806,126.543389025376,162.226809703569,119.28200553487,104.56851874058,119.175308203021,104.286256106603,102.066900121634,174.610147413831,136.207332105052,121.953030288916,152.801573065971,78.1747581442517,118.680876284871,105.703738132108,126.531228042063,91.9164063999646,121.450338554137,106.278185403602,118.898105399806,150.077491691236,96.2585209187056,101.644627532568,176.902474579454,209.98775459407,185.390949569518,204.626838016175,140.747774826558,124.196290379926,70.7192581467153,322.634425915093,200.706927293882,183.760138687222,5.27988733383968,9.83049500271837,4.44754626931777,11.5217160092957,5.20514783146816,4.02326707968138,5.94940385506376,2.86216126360609,2.84606484554724,7.6340834618222,1.14681968437569,60.7988111463519,16.8152568894461,18.4368859342554,0.393419540227666,0.393010762749165,0.411202997999018,2.00623794468814,0,0,0,2.00538822393312,0.589211814949674,0.443067789167242,0.541607727530031,0.640456598628376,0.780356085359269,4.27538551969558,6.35605040907451,8.98389565778663,0.14828656316206,0.267540828089713,0,4.30575502250752,2.68254345521345,1.71813722741315,0.506039384039006,5.73417745783374,0.651083453856419,0,4.06552821509986,2.94369205655162,9.99445812418767,11.1285308460688,5.74789597844733,1.61285394579786,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.70272798147026,0,0,12.9818957461873,8.70648686496336,25.7938443406598,9.77811559651902,18.8758320557442,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,35.5807127077371,50.4114343392823,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,1.38895653772983,0.190254152234598,0,0,30.5309087548373,19.4223540065567,32.1043310543653,0,0,0,0,0,0,0.985326475791887,1.23267807618516,0.414656231081544,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,23.1085183218262,40.1805673145701,29.5167515276244,0,0,0,0,0,0,0.896681151948218,5.71389204585589,0.431255149719035,5.00537841491019,0,0,0,0.335032530668698,0,23.2192177423627,20.9413021442817,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9136835265898,54.5756928071101,36.8210074421883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.633322905892992,0,0,0,0,2.01090682660736,0,1.69458841398202,0,0,0,0,15.7308758861972,10.7049208999933,43.8628334124105,29.0642766058503,26.7385477506026,12.9694662238543,13.5007859309529,49.966886106539,0,0.962479855263359,0,0,0,0.497992903438899,0,9.18065108590956,80.6237608257264,106.471812110113,0,1.40398589056729,6.39057101292938,1.72347885350326,20.0507581672054,38.429233560964,22.964094739829,2.01799707191048,4.25846237690326,2.40453741329035,7.68101910771145,6.03925491309523,6.00656910162871,9.37862857929793,0,0,5.67956924799565,8.65987116794332,2.81974010175699,0,1.90460633053462,0,0.334330152832435,0,0,2.07875276582847,0,1.9882952955326,2.95405774462077,0,0,0,1.9924798825107,2.48655523978033,0,0,0.123084805461069,0,0,0,24.043901400663,0.789147245095469,64.6604349336737,0,1.93866549219044,1.94813006139888,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,2.05013945663194,0,0.774054819518572,0.295547618953547,2.4132393686937,0,0,1.15425387755696,0,0,0,0,0,0,0.533034776018635,3.06579894587209,1.56980256395025,5.81740886650547,0,0,0,0,2.06617552674492,0,0,0,0,0,1.41532103205343,3.66618086960175,0,0,0,4.65067817566672,3.21031058919516,3.98249557733077,0,0,0,0.394584402849391,1.20990716048664,0,4.10712767585172,0,0,0,0,0,0,0.284609546029793,0,0,0,0,2.79562669187248,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,1.39283751102933,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,4.38097212454378,1.27746588066972,0,0,1.11712960508902,2.29160424011684,0,0.599037001496973,0.429226048136571,0.446342914883745,0.604651252380536,0,0,0,0,0,0,0.254019996197353,0.795229689809303,2.72406812223151,0,0,0,154.782037387432,218.212151185342,1.33649024647654,0,1.33969702408637,0.367182116944987,0,0,0,2.85878130549347,2.64836788146173,0,0,0,0,0,2.87323822622686,0,0,1.46552233678082,1.32506888912221,1.0342636508924,3.70251284879532,0,0,5.33937062838473,0.157204305099666,8.69902016229111,6.4501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| |||
|short_description=p3@LST1 | |||
}} |
Latest revision as of 22:04, 17 September 2015
Short description: | p3@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LST1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000376090, ENST00000396107, ENST00000396114_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1Q5STA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-54 | 98 |
blood island | 2.15e-54 | 98 |
hemolymphoid system | 2.26e-50 | 108 |
bone marrow | 2.97e-45 | 76 |
immune system | 2.85e-42 | 93 |
bone element | 4.90e-40 | 82 |
skeletal element | 3.33e-34 | 90 |
skeletal system | 2.69e-28 | 100 |
lateral plate mesoderm | 3.59e-17 | 203 |
adult organism | 3.91e-16 | 114 |
connective tissue | 1.13e-10 | 371 |
musculoskeletal system | 2.73e-09 | 167 |
blood | 2.11e-08 | 15 |
haemolymphatic fluid | 2.11e-08 | 15 |
organism substance | 2.11e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.15e-11 | 31 |
leukemia | 4.25e-08 | 39 |