FFCP PHASE1:Hg19::chr4:48014931..48014964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1259 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2148 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZM0,D6RCF1,P29973,Q4W5E3 | |||
|association_with_transcript=0bp_to_ENST00000420489,ENST00000504722,NM_000087,uc003gxt.3_5end | |||
|cluster_id=chr4:48014931..48014964,- | |||
|description=CAGE_peak_4_at_CNGA1_5end | |||
|id=chr4:48014931..48014964,- | |||
|ontology_enrichment_celltype=CL:0002057!4.26e-18!42;CL:0000860!2.41e-16!45;CL:0002194!1.99e-12!63;CL:0000576!1.99e-12!63;CL:0000040!1.99e-12!63;CL:0000559!1.99e-12!63;CL:0002009!8.55e-12!65;CL:0000766!1.59e-11!76;CL:0000839!2.44e-11!70;CL:0000557!4.61e-11!71;CL:0000763!1.07e-09!112;CL:0000049!1.07e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.01e-41;33!CL:0002057;7.01e-41;33!CL:0000473;5.60e-31;39!CL:0000234;5.60e-31;39!CL:0000576;8.82e-20;48!CL:0000766;5.39e-12;69!CL:0000763;2.96e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.75e-34,42;CL:0002057,2.75e-34,42;CL:0000473,2.47e-33,48;CL:0000234,2.47e-33,48;CL:0002194,7.18e-26,59;CL:0000576,7.18e-26,59;CL:0000040,7.18e-26,59;CL:0000559,7.18e-26,59;CL:0002009,6.59e-25,61;CL:0000839,9.43e-23,66;CL:0000557,2.33e-22,67;CL:0000766,1.48e-20,72;CL:0000763,1.09e-17,108;CL:0000049,1.09e-17,108;CL:0002087,1.75e-11,115;CL:0002031,7.54e-11,120;CL:0002032,2.06e-10,161;CL:0000837,2.06e-10,161;CL:0000037,8.53e-10,168;CL:0000738,3.89e-09,136;CL:0000988,4.48e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-29;42!CL:0000049;3.19e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-28!115;UBERON:0002390!7.94e-10!102;UBERON:0003061!7.94e-10!102;UBERON:0002371!8.66e-10!80;UBERON:0002193!9.88e-09!112;UBERON:0001474!1.54e-08!86;UBERON:0001049!9.38e-08!57;UBERON:0005068!9.38e-08!57;UBERON:0006241!9.38e-08!57;UBERON:0007135!9.38e-08!57;UBERON:0002405!1.10e-07!115;UBERON:0003080!2.39e-07!42;UBERON:0000062!5.63e-07!511;UBERON:0001893!8.70e-07!34;UBERON:0002020!8.79e-07!34;UBERON:0003528!8.79e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-19,76;UBERON:0001474,1.33e-17,82;UBERON:0002405,4.34e-17,93;UBERON:0002390,5.15e-16,98;UBERON:0003061,5.15e-16,98;UBERON:0004765,1.04e-15,90;UBERON:0002193,3.65e-14,108;UBERON:0001434,9.16e-14,100;UBERON:0002204,9.35e-09,167;UBERON:0003081,2.17e-07,203;UBERON:0005418,7.82e-07,1;UBERON:0001389,7.82e-07,1;UBERON:0000026,7.82e-07,1;UBERON:0008784,7.82e-07,1;UBERON:0006058,7.82e-07,1;UBERON:0003663,7.82e-07,1;UBERON:0004256,7.82e-07,1;UBERON:0004708,7.82e-07,1;UBERON:0002101,7.82e-07,1;UBERON:0004709,7.82e-07,1;UBERON:0002529,7.82e-07,1;UBERON:0010538,7.82e-07,1;UBERON:0003661,7.82e-07,1;UBERON:0010890,7.82e-07,1;UBERON:0002471,7.82e-07,1;UBERON:0001383,7.82e-07,1;UBERON:0004357,7.82e-07,1;UBERON:0004347,7.82e-07,1;UBERON:0005420,7.82e-07,1;UBERON:0005732,7.82e-07,1;UBERON:0010758,7.82e-07,1;UBERON:0010707,7.82e-07,1;UBERON:0000978,7.82e-07,1;UBERON:0002103,7.82e-07,1;UBERON:0001665,7.82e-07,1;UBERON:0003823,7.82e-07,1;UBERON:0000154,7.82e-07,1;UBERON:0010709,7.82e-07,1;UBERON:0005733,7.82e-07,1;UBERON:0005730,7.82e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0.895661896959697,0,0,1.01778767145695,1.13362783106643,0,3.48643555358527,7.40102198439286,0,2.8769239232215,3.84241059793651,0,1.72372840368309,2.5819387343353,0,2.07066573496865,1.09162460023138,0,1.83650335422542,0.320929027076094,0,0.329851300186716,1.99463657621632,0,1.16083695451434,0.56738522469114,0,3.01498398308092,2.60741459210101,0,3.02699751316684,2.57794345191295,0,0.633765858935825,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,1.03051603426729,0,0,0,0.19538809540204,0,0,0,0,0,0,4.10222901961303,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.179021174675609,0,3.15658898038188,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,0,2.86085842164682,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.39781334593624,0,0,0,0,1.26085721434945,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0,1.28767814440971,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,1.49730843868477,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,1.63205341010842,1.0027595760908,1.22538230705385,0.655745261419609,0,0,0,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0,0.470958557103084,0.314231179832004,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,1.94228651156368,1.33461648913121,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,6.01497075071063,0.709036767709349,0,0,0,0,1.46067277649303,0,0.286679166302903,0,0,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,0,0.18378979906969,0,0.530450887527676,0,0,0.20686599172379,0.426467963801962,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.636471582781649,0.404234377916439,1.08858373948481,0.684466602170562,0.202056159043763,1.14755528628282,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p4@CNGA1 | |||
}} |
Latest revision as of 22:19, 17 September 2015
Short description: | p4@CNGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420489, ENST00000504722, NM_000087, uc003gxt.3_5end |
EntrezGene: | CNGA1 |
HGNC: | 2148 |
UniProt: | Q8IZM0D6RCF1P29973Q4W5E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.75e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.75e-34 | 42 |
defensive cell | 2.47e-33 | 48 |
phagocyte | 2.47e-33 | 48 |
monopoietic cell | 7.18e-26 | 59 |
monocyte | 7.18e-26 | 59 |
monoblast | 7.18e-26 | 59 |
promonocyte | 7.18e-26 | 59 |
macrophage dendritic cell progenitor | 6.59e-25 | 61 |
myeloid lineage restricted progenitor cell | 9.43e-23 | 66 |
granulocyte monocyte progenitor cell | 2.33e-22 | 67 |
myeloid leukocyte | 1.48e-20 | 72 |
myeloid cell | 1.09e-17 | 108 |
common myeloid progenitor | 1.09e-17 | 108 |
nongranular leukocyte | 1.75e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.54e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-10 | 161 |
hematopoietic stem cell | 8.53e-10 | 168 |
leukocyte | 3.89e-09 | 136 |
hematopoietic cell | 4.48e-09 | 177 |