FFCP PHASE1:Hg19::chr7:27224842..27224872,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27224842..27224872,- to FFCP PHASE1:Hg19::chr7:27224842..27224872,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3207 | |EntrezGene=3207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5101 | |HGNC=5101 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517402,uc003syy.2_5end | |||
|cluster_id=chr7:27224842..27224872,- | |||
|coexpression_cluster_id=C2891 | |||
|description=CAGE_peak_1_at_HOXA11_5end | |||
|id=chr7:27224842..27224872,- | |||
|ontology_enrichment_celltype=CL:0002620!3.64e-08!23;CL:1000497!2.26e-07!18;CL:0002518!2.26e-07!18;CL:1000507!7.26e-07!12;CL:1000494!7.26e-07!12;CL:0000062!8.20e-07!11;CL:0000375!8.20e-07!11;CL:0000335!8.20e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.89e-10;23!CL:1000507;4.80e-09;10!CL:1000494;4.80e-09;10!CL:1000497;7.90e-08;17!CL:0002518;7.90e-08;17!CL:1000449;1.13e-07;15!CL:0000062;7.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.12e-10,23;CL:1000507,4.79e-09,10;CL:1000494,4.79e-09,10;CL:1000497,7.61e-08,17;CL:0002518,7.61e-08,17;CL:0000062,8.66e-08,11;CL:0000375,8.66e-08,11;CL:0000335,8.66e-08,11;CL:1000449,1.09e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000335;9.87e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!6.70e-18!45;UBERON:0006554!2.79e-17!44;UBERON:0003064!4.60e-12!37;UBERON:0000489!7.84e-10!32;UBERON:0002113!1.28e-09!27;UBERON:0003918!1.28e-09!27;UBERON:0005095!1.28e-09!27;UBERON:0007687!1.28e-09!27;UBERON:0005156!2.08e-09!59;UBERON:0000990!2.08e-09!59;UBERON:0000162!1.51e-08!14;UBERON:0001353!1.51e-08!14;UBERON:0000163!1.51e-08!14;UBERON:0006866!1.51e-08!14;UBERON:0000164!1.51e-08!14;UBERON:0000931!1.51e-08!14;UBERON:0001046!5.45e-08!19;UBERON:0003101!1.09e-07!22;UBERON:0000079!1.09e-07!22;UBERON:0004122!1.22e-07!15;UBERON:0000080!1.30e-07!18;UBERON:0002120!1.30e-07!18;UBERON:0004875!1.30e-07!18;UBERON:0005721!1.30e-07!18;UBERON:0005754!1.30e-07!18;UBERON:0007297!1.30e-07!18;UBERON:0004876!2.40e-07!20;UBERON:0006555!4.12e-07!17;UBERON:0005103!4.12e-07!17;UBERON:0000083!4.12e-07!17;UBERON:0009201!4.12e-07!17;UBERON:0004819!4.12e-07!17;UBERON:0006553!4.12e-07!17;UBERON:0003074!4.12e-07!17;UBERON:0003060!4.12e-07!17;UBERON:0003937!4.67e-07!12;UBERON:0005399!4.67e-07!12;UBERON:0009773!7.26e-07!12;UBERON:0001231!7.26e-07!12;UBERON:0004810!7.26e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.64e-12;30!UBERON:0001008;1.64e-12;30!UBERON:0000489;5.61e-10;29!UBERON:0002113;1.69e-09;24!UBERON:0011143;1.69e-09;24!UBERON:0004211;4.80e-09;10!UBERON:0009773;4.80e-09;10!UBERON:0001231;4.80e-09;10!UBERON:0004810;4.80e-09;10!UBERON:0006555;1.13e-07;15!UBERON:0004819;1.13e-07;15!UBERON:0001285;1.13e-07;15!UBERON:0007684;1.13e-07;15!UBERON:0003937;2.01e-07;12!UBERON:0005399;2.01e-07;12!UBERON:0010260;2.07e-07;9!UBERON:0002367;8.56e-07;11!UBERON:0010147;8.56e-07;11!UBERON:0001737;8.88e-07;9!UBERON:0001557;8.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,2.09e-18,48;UBERON:0006554,1.05e-17,47;UBERON:0000489,3.54e-11,31;UBERON:0002113,1.01e-10,26;UBERON:0003918,1.01e-10,26;UBERON:0011143,1.01e-10,26;UBERON:0005095,1.01e-10,26;UBERON:0007687,1.01e-10,26;UBERON:0003104,9.90e-10,160;UBERON:0009142,9.90e-10,160;UBERON:0000162,4.23e-09,14;UBERON:0001353,4.23e-09,14;UBERON:0000163,4.23e-09,14;UBERON:0006866,4.23e-09,14;UBERON:0000164,4.23e-09,14;UBERON:0000931,4.23e-09,14;UBERON:0004810,4.79e-09,10;UBERON:0003064,5.08e-09,28;UBERON:0006555,2.25e-08,16;UBERON:0004819,2.25e-08,16;UBERON:0004122,3.22e-08,15;UBERON:0001046,6.52e-08,19;UBERON:0004211,1.09e-07,15;UBERON:0009773,1.09e-07,15;UBERON:0001231,1.09e-07,15;UBERON:0001285,1.09e-07,15;UBERON:0007684,1.09e-07,15;UBERON:0004208,1.09e-07,15;UBERON:0010260,1.84e-07,9;UBERON:0003937,2.27e-07,12;UBERON:0005399,2.27e-07,12;UBERON:0005156,3.12e-07,59;UBERON:0000990,3.12e-07,59;UBERON:0002199,5.19e-07,46;UBERON:0002416,5.19e-07,46;UBERON:0002367,9.22e-07,11;UBERON:0010147,9.22e-07,11;UBERON:0009846,9.22e-07,11;UBERON:0003353,9.22e-07,11;UBERON:0004902,9.22e-07,11;UBERON:0003820,9.22e-07,11;UBERON:0009847,9.22e-07,11;UBERON:0001737,9.68e-07,9 | |||
|phase1_expression=2.36181893051724,2.14100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,7.59899634504932,6.94891860769514,11.7533532689927,0,0,0,0,1.73272894144065,1.98838425436749,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67453965722959,9.5254203020819,11.0083354410226,6.36228757640879,9.73269740605272,0,0,0,13.0324180120224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0.33472061276467,3.22263453687318,3.80136052859256,0.488124115096339,0.735326160691737,0,3.83988831621543,5.16417557040191,4.84229366078286,10.7321646226118,4.74632829784064,6.41206103756425,0,0,0,2.48485975847659,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,4.63290909710583,4.11020745253177,1.45685649931318,1.82586048712923,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,3.94657198515496,7.47450860864986,8.9011398487016,3.90118424909723,7.72893969288292,12.3667459221902,22.706256472454,2.36286865137773,5.94365731483312,6.31084435610286,17.6735805393215,0,11.005297368015,12.7955164749103,14.5822109387019,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,7.09840800239063,8.59781919398319,5.06123162755312,8.27204795492955,5.88274499049497,7.35538919244399,4.71909578560575,3.92442930250692,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,2.30986316417718,2.31492756288305,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,5.68795549334222,3.57656445851882,5.917119267892,28.9872547077509,71.7651314688426,13.6319908358935,1.41849132023278,22.3794630373523,0,106.896456262114,43.6317378493807,1.95441710576241,0,7.91951872933429,0.602878754119172,1.74306691720059,0.099972991182057,0,0,0,0,0,11.4109524032575,0.434343920002738,17.670963739333,1.43248770591916,0.448340575974109,0.197030760201927,0,0,0,0,0,0,0,0,0,0,3.0672872929785,1.00034104211935,1.35632511849868,0,0,0,0,8.72743689210385,4.5481500811197,9.31257641632544,8.63493278096067,2.94990669666725,29.8879633770205,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,1.12264037773229,0.128139149255701,2.55853624533352,0,1.48418066444991,5.08891989548763,1.77561725313127,1.88892458831761,0,1.62694529843943,0.120859449591622,5.01266175758212,6.26150724764095,13.7777337797528,14.5672934405374,19.0130401691165,8.12159303233341,6.70033432808408,14.9026456143602,10.2297457257282,9.28854334257306,0,0.510281115829547,9.71621622459627,10.7959076883203,20.5919292533328,29.5996966574364,4.84264918785573,5.81753206250107,11.1937377361089,0,0,0,0,0,1.33953315142039,14.1016975820249,9.40608299094703,1.72279661398852,0,0,7.15363315361703,0,0.307007349452259,1.51620229732984,8.80846007919844,3.19036726611303,1.02271952899321,4.09547363974992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0.78494864019923,14.0300516914985,23.0611104978286,17.5540479495073,0.404364963146632,0,0,0,3.1682753652067,1.05650146756755,19.519487331342,17.6756789942141,0,0,0,0,0,0,9.13096696332168,8.98488144489275,5.91560765317707,11.9031422329363,16.6040879312175,8.56010523555001,11.3523540502591,2.9555068941673,1.97576935775941,0,0,0,0,0,2.16530741786592,3.44404298136984,1.68471475667626,3.99087138183008,2.98640420269047,0,0,0,0,0,0,0,0,2.02965735142199,0,10.5367292871844,0,0,0,0,0,0,8.46694330895532,2.27235358192189,0.561594356226918,4.10822422259746,3.29027781123349,5.01268954180134,7.27954644546894,3.21176150207399,1.21079824314629,25.9766204991099,0,14.747556686806,15.6573275524691,16.0175176043432,35.9514095539754,0,0,0,0,0,7.29848107592057,0.879049075631364,0,0,7.95581211057957,0,0.593929361665277,0,0,0,0,0,0.422250816255987,0,2.21027132424918,0,0,0,0,0,0.179021174675609,0,20.9124019950299,0,0,0,0.0927680981618513,0,0,0,2.89999830173917,2.61724931056649,0,0,1.03423011972439,0.291604613383254,9.72299971626437,0,0,0,0,0,0,1.41620002574687,7.11061095820877,36.1666214967846,0,0,0,0,0.638002319463839,21.1590440758302,2.66517388009317,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,17.9147147594131,7.43043541828049,22.6081153625441,1.77912677208373,1.85345908419754,1.67075119208729,0,0,0,0,0,0,4.73501283419269,0,0.30607276163049,0.063186579628488,6.31358361540869,25.8183596579145,0,0,0,0,1.13843818411917,0,1.38847790668105,0,0.609414446062818,8.91106008034354,8.94327368852406,3.96700958285249,4.31226970808495,6.32289019309711,0,0,0,0,1.78843150532691,0,1.56441106187842,0,0,0,2.3054466744657,0,1.37275998289572,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67326718575073,0,0,0,0,0,0.415440338029185,0,0,0,0,3.86147965766071,27.433749594604,0,2.86859742932552,7.29277749813892,0.714695326373367,0,0,36.9239729192525,27.6550877184406,35.2714348918162,1.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| ||
|short_description=p1@HOXA11 | |||
}} | }} |
Latest revision as of 02:08, 18 September 2015
Short description: | p1@HOXA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA11_5end |
Coexpression cluster: | C2891_Mesenchymal_uterus_smallcell_small_leiomyoma_cervix_acute |
Association with transcript: | 0bp_to_ENST00000517402, uc003syy.2_5end |
EntrezGene: | HOXA11 |
HGNC: | 5101 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.12e-10 | 23 |
kidney tubule cell | 4.79e-09 | 10 |
nephron tubule epithelial cell | 4.79e-09 | 10 |
kidney cell | 7.61e-08 | 17 |
kidney epithelial cell | 7.61e-08 | 17 |
osteoblast | 8.66e-08 | 11 |
osteoprogenitor cell | 8.66e-08 | 11 |
mesenchyme condensation cell | 8.66e-08 | 11 |
epithelial cell of nephron | 1.09e-07 | 15 |