FFCP PHASE1:Hg19::chr3:38207105..38207146,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8508 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBK9 | |||
|association_with_transcript=0bp_to_ENST00000426620_5end | |||
|cluster_id=chr3:38207105..38207146,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_OXSR1_5end | |||
|id=chr3:38207105..38207146,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.75e-24!682;CL:0000548!8.51e-24!679;CL:0000004!8.51e-24!679;CL:0000255!8.51e-24!679;CL:0002057!6.68e-21!42;CL:0000063!2.20e-20!578;CL:0000860!2.71e-20!45;CL:0000766!7.68e-20!76;CL:0000144!7.45e-18!625;CL:0000557!4.55e-17!71;CL:0002371!8.33e-17!591;CL:0002009!4.90e-16!65;CL:0000003!2.50e-15!722;CL:0002194!6.01e-15!63;CL:0000576!6.01e-15!63;CL:0000040!6.01e-15!63;CL:0000559!6.01e-15!63;CL:0000839!1.20e-14!70;CL:0000134!5.01e-11!358;CL:0000723!1.35e-10!436;CL:0000763!1.88e-10!112;CL:0000049!1.88e-10!112;CL:0000048!2.89e-10!430;CL:0002320!2.98e-10!365;CL:0000034!6.56e-10!444;CL:0000219!5.85e-09!390;CL:0000081!4.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-18;33!CL:0002057;2.32e-18;33!CL:0000473;1.95e-14;39!CL:0000234;1.95e-14;39!CL:0000576;4.00e-10;48!CL:0000766;5.03e-10;69!CL:0000081;1.83e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.23e-22,42;CL:0002057,9.23e-22,42;CL:0000766,2.09e-21,72;CL:0000473,3.96e-20,48;CL:0000234,3.96e-20,48;CL:0000557,1.93e-18,67;CL:0002009,2.18e-17,61;CL:0002194,3.23e-16,59;CL:0000576,3.23e-16,59;CL:0000040,3.23e-16,59;CL:0000559,3.23e-16,59;CL:0000839,1.22e-15,66;CL:0000134,6.07e-12,354;CL:0000763,2.61e-11,108;CL:0000049,2.61e-11,108;CL:0002320,5.17e-11,361;CL:0000723,8.53e-11,433;CL:0000048,2.54e-10,427;CL:0000034,4.26e-10,441;CL:0000219,1.76e-09,386;CL:0000081,2.67e-07,11;CL:0000738,6.81e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!6.41e-17!101;UBERON:0001434!6.41e-17!101;UBERON:0001474!1.23e-15!86;UBERON:0002371!2.15e-15!80;UBERON:0002204!1.43e-12!167;UBERON:0002390!3.69e-12!102;UBERON:0003061!3.69e-12!102;UBERON:0002193!1.43e-10!112;UBERON:0000926!2.51e-10!448;UBERON:0004120!2.51e-10!448;UBERON:0006603!2.51e-10!448;UBERON:0002384!8.29e-10!375;UBERON:0002405!5.89e-08!115;UBERON:0003102!1.26e-07!95;UBERON:0002199!2.79e-07!45;UBERON:0002416!2.79e-07!45;UBERON:0002097!3.06e-07!40 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.25e-16,100;UBERON:0002371,1.66e-16,76;UBERON:0001474,1.83e-16,82;UBERON:0004765,7.20e-16,90;UBERON:0002390,1.87e-12,98;UBERON:0003061,1.87e-12,98;UBERON:0002204,1.53e-11,167;UBERON:0002405,3.53e-11,93;UBERON:0002193,6.04e-11,108;UBERON:0002384,2.05e-10,371;UBERON:0003102,3.13e-09,99;UBERON:0002199,7.42e-08,46;UBERON:0002416,7.42e-08,46;UBERON:0000926,7.71e-08,315;UBERON:0004120,7.71e-08,315;UBERON:0006603,7.71e-08,315;UBERON:0002097,9.25e-08,41;UBERON:0003081,1.74e-07,203;UBERON:0005631,9.06e-07,14;UBERON:0000158,9.06e-07,14 | |||
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| |||
|short_description=p2@OXSR1 | |||
}} |
Latest revision as of 03:12, 18 September 2015
Short description: | p2@OXSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OXSR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000426620_5end |
EntrezGene: | OXSR1 |
HGNC: | 8508 |
UniProt: | F8WBK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.23e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.23e-22 | 42 |
myeloid leukocyte | 2.09e-21 | 72 |
defensive cell | 3.96e-20 | 48 |
phagocyte | 3.96e-20 | 48 |
granulocyte monocyte progenitor cell | 1.93e-18 | 67 |
macrophage dendritic cell progenitor | 2.18e-17 | 61 |
monopoietic cell | 3.23e-16 | 59 |
monocyte | 3.23e-16 | 59 |
monoblast | 3.23e-16 | 59 |
promonocyte | 3.23e-16 | 59 |
myeloid lineage restricted progenitor cell | 1.22e-15 | 66 |
mesenchymal cell | 6.07e-12 | 354 |
myeloid cell | 2.61e-11 | 108 |
common myeloid progenitor | 2.61e-11 | 108 |
connective tissue cell | 5.17e-11 | 361 |
somatic stem cell | 8.53e-11 | 433 |
multi fate stem cell | 2.54e-10 | 427 |
stem cell | 4.26e-10 | 441 |
motile cell | 1.76e-09 | 386 |
blood cell | 2.67e-07 | 11 |
leukocyte | 6.81e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.25e-16 | 100 |
bone marrow | 1.66e-16 | 76 |
bone element | 1.83e-16 | 82 |
skeletal element | 7.20e-16 | 90 |
hematopoietic system | 1.87e-12 | 98 |
blood island | 1.87e-12 | 98 |
musculoskeletal system | 1.53e-11 | 167 |
immune system | 3.53e-11 | 93 |
hemolymphoid system | 6.04e-11 | 108 |
connective tissue | 2.05e-10 | 371 |
surface structure | 3.13e-09 | 99 |
integument | 7.42e-08 | 46 |
integumental system | 7.42e-08 | 46 |
mesoderm | 7.71e-08 | 315 |
mesoderm-derived structure | 7.71e-08 | 315 |
presumptive mesoderm | 7.71e-08 | 315 |
skin of body | 9.25e-08 | 41 |
lateral plate mesoderm | 1.74e-07 | 203 |
extraembryonic membrane | 9.06e-07 | 14 |
membranous layer | 9.06e-07 | 14 |