FFCP PHASE1:Hg19::chr11:47235980..47236028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1643 | |EntrezGene=1643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2718 | |HGNC=2718 | ||
|TSSclassifier=strong | |||
|UniProt=Q92466 | |UniProt=Q92466 | ||
|association_with_transcript=-464bp_to_ENST00000256996,ENST00000378600,ENST00000378601,ENST00000378603,NM_000107,uc001neb.2,uc001nec.2,uc001ned.2,uc001nee.2,uc009yli.1_5end | |association_with_transcript=-464bp_to_ENST00000256996,ENST00000378600,ENST00000378601,ENST00000378603,NM_000107,uc001neb.2,uc001nec.2,uc001ned.2,uc001nee.2,uc009yli.1_5end | ||
|cluster_id=chr11:47235980..47236028,+ | |||
|description=CAGE_peak_3_at_DDB2_5end | |description=CAGE_peak_3_at_DDB2_5end | ||
|id=chr11:47235980..47236028,+ | |id=chr11:47235980..47236028,+ | ||
|ontology_enrichment_celltype=CL:0000557!8.22e-24!71;CL:0000839!3.45e-22!70;CL:0002009!7.78e-22!65;CL:0000860!1.06e-20!45;CL:0002194!1.21e-20!63;CL:0000576!1.21e-20!63;CL:0000040!1.21e-20!63;CL:0000559!1.21e-20!63;CL:0002057!3.75e-19!42;CL:0000766!5.11e-18!76;CL:0002031!4.16e-14!124;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000738!9.41e-13!140;CL:0002087!4.51e-12!119;CL:0002032!2.86e-09!165;CL:0000837!2.86e-09!165;CL:0000037!4.72e-09!172;CL:0000566!4.72e-09!172;CL:0000988!4.07e-07!182 | |ontology_enrichment_celltype=CL:0000557!8.22e-24!71;CL:0000839!3.45e-22!70;CL:0002009!7.78e-22!65;CL:0000860!1.06e-20!45;CL:0002194!1.21e-20!63;CL:0000576!1.21e-20!63;CL:0000040!1.21e-20!63;CL:0000559!1.21e-20!63;CL:0002057!3.75e-19!42;CL:0000766!5.11e-18!76;CL:0002031!4.16e-14!124;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000738!9.41e-13!140;CL:0002087!4.51e-12!119;CL:0002032!2.86e-09!165;CL:0000837!2.86e-09!165;CL:0000037!4.72e-09!172;CL:0000566!4.72e-09!172;CL:0000988!4.07e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.61e-15;33!CL:0002057;6.61e-15;33!CL:0000576;1.33e-13;48!CL:0000473;9.97e-13;39!CL:0000234;9.97e-13;39!CL:0000766;2.10e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.51e-25,67;CL:0000839,3.83e-23,66;CL:0002009,8.70e-23,61;CL:0002194,1.71e-21,59;CL:0000576,1.71e-21,59;CL:0000040,1.71e-21,59;CL:0000559,1.71e-21,59;CL:0000473,6.90e-21,48;CL:0000234,6.90e-21,48;CL:0000860,1.30e-20,42;CL:0002057,1.30e-20,42;CL:0000766,1.86e-19,72;CL:0000763,6.35e-15,108;CL:0000049,6.35e-15,108;CL:0002031,9.70e-14,120;CL:0000738,2.82e-13,136;CL:0002087,1.18e-11,115;CL:0000037,1.04e-09,168;CL:0002032,1.21e-09,161;CL:0000837,1.21e-09,161;CL:0000988,4.96e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.35e-21!80;UBERON:0001474!8.98e-19!86;UBERON:0002390!2.38e-15!102;UBERON:0003061!2.38e-15!102;UBERON:0002405!4.58e-15!115;UBERON:0004765!1.06e-14!101;UBERON:0001434!1.06e-14!101;UBERON:0002193!2.54e-13!112;UBERON:0001049!1.20e-09!57;UBERON:0005068!1.20e-09!57;UBERON:0006241!1.20e-09!57;UBERON:0007135!1.20e-09!57;UBERON:0000955!3.91e-08!69;UBERON:0006238!3.91e-08!69;UBERON:0002780!6.20e-08!41;UBERON:0001890!6.20e-08!41;UBERON:0006240!6.20e-08!41;UBERON:0000062!1.82e-07!511;UBERON:0001017!2.13e-07!82;UBERON:0002020!2.24e-07!34;UBERON:0003528!2.24e-07!34;UBERON:0003080!3.02e-07!42;UBERON:0002616!4.03e-07!59;UBERON:0002791!6.20e-07!33;UBERON:0005743!8.05e-07!86;UBERON:0001893!8.35e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.13e-21,76;UBERON:0001474,8.02e-19,82;UBERON:0004765,6.63e-17,90;UBERON:0002405,2.45e-16,93;UBERON:0002390,1.56e-15,98;UBERON:0003061,1.56e-15,98;UBERON:0002193,8.82e-14,108;UBERON:0001434,4.33e-13,100;UBERON:0001049,2.04e-10,56;UBERON:0005068,2.04e-10,56;UBERON:0006241,2.04e-10,56;UBERON:0007135,2.04e-10,56;UBERON:0000073,6.45e-10,53;UBERON:0002616,6.45e-10,53;UBERON:0000955,5.11e-09,68;UBERON:0006238,5.11e-09,68;UBERON:0001017,6.77e-08,81;UBERON:0002780,1.61e-07,41;UBERON:0001890,1.61e-07,41;UBERON:0003080,1.61e-07,41;UBERON:0006240,1.61e-07,41;UBERON:0001016,2.56e-07,89;UBERON:0003528,6.10e-07,34;UBERON:0002020,6.10e-07,34 | |||
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| ||
|short_description=p3@DDB2 | |short_description=p3@DDB2 | ||
}} | }} |
Latest revision as of 04:02, 18 September 2015
Short description: | p3@DDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -464bp_to_ENST00000256996, ENST00000378600, ENST00000378601, ENST00000378603, NM_000107, uc001neb.2, uc001nec.2, uc001ned.2, uc001nee.2, uc009yli.1_5end |
EntrezGene: | DDB2 |
HGNC: | 2718 |
UniProt: | Q92466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.51e-25 | 67 |
myeloid lineage restricted progenitor cell | 3.83e-23 | 66 |
macrophage dendritic cell progenitor | 8.70e-23 | 61 |
monopoietic cell | 1.71e-21 | 59 |
monocyte | 1.71e-21 | 59 |
monoblast | 1.71e-21 | 59 |
promonocyte | 1.71e-21 | 59 |
defensive cell | 6.90e-21 | 48 |
phagocyte | 6.90e-21 | 48 |
classical monocyte | 1.30e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-20 | 42 |
myeloid leukocyte | 1.86e-19 | 72 |
myeloid cell | 6.35e-15 | 108 |
common myeloid progenitor | 6.35e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 9.70e-14 | 120 |
leukocyte | 2.82e-13 | 136 |
nongranular leukocyte | 1.18e-11 | 115 |
hematopoietic stem cell | 1.04e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-09 | 161 |
hematopoietic cell | 4.96e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.13e-21 | 76 |
bone element | 8.02e-19 | 82 |
skeletal element | 6.63e-17 | 90 |
immune system | 2.45e-16 | 93 |
hematopoietic system | 1.56e-15 | 98 |
blood island | 1.56e-15 | 98 |
hemolymphoid system | 8.82e-14 | 108 |
skeletal system | 4.33e-13 | 100 |
neural tube | 2.04e-10 | 56 |
neural rod | 2.04e-10 | 56 |
future spinal cord | 2.04e-10 | 56 |
neural keel | 2.04e-10 | 56 |
regional part of nervous system | 6.45e-10 | 53 |
regional part of brain | 6.45e-10 | 53 |
brain | 5.11e-09 | 68 |
future brain | 5.11e-09 | 68 |
central nervous system | 6.77e-08 | 81 |
regional part of forebrain | 1.61e-07 | 41 |
forebrain | 1.61e-07 | 41 |
anterior neural tube | 1.61e-07 | 41 |
future forebrain | 1.61e-07 | 41 |
nervous system | 2.56e-07 | 89 |
brain grey matter | 6.10e-07 | 34 |
gray matter | 6.10e-07 | 34 |