FFCP PHASE1:Hg19::chr5:59817936..59817963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506510_5end | |association_with_transcript=0bp_to_ENST00000506510_5end | ||
|cluster_id=chr5:59817936..59817963,- | |||
|coexpression_cluster_id=C2115 | |||
|description=CAGE_peak_19_at_PDE4D_5end | |description=CAGE_peak_19_at_PDE4D_5end | ||
|id=chr5:59817936..59817963,- | |id=chr5:59817936..59817963,- | ||
|ontology_enrichment_celltype=CL:0002087!1.29e-33!119;CL:0000738!1.77e-33!140;CL:0002031!1.07e-30!124;CL:0000037!2.22e-29!172;CL:0000566!2.22e-29!172;CL:0000988!8.16e-28!182;CL:0000945!1.25e-27!24;CL:0000826!1.25e-27!24;CL:0002032!1.36e-27!165;CL:0000837!1.36e-27!165;CL:0000557!4.09e-24!71;CL:0002009!5.25e-24!65;CL:0002194!4.66e-22!63;CL:0000576!4.66e-22!63;CL:0000040!4.66e-22!63;CL:0000559!4.66e-22!63;CL:0000839!2.42e-20!70;CL:0000236!7.10e-19!14;CL:0000766!1.64e-18!76;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0002057!2.89e-16!42;CL:0000860!1.56e-14!45;CL:0000542!9.52e-10!53;CL:0000051!9.52e-10!53;CL:0000838!5.14e-09!52;CL:0000990!1.35e-08!8;CL:0000453!9.33e-07!5 | |ontology_enrichment_celltype=CL:0002087!1.29e-33!119;CL:0000738!1.77e-33!140;CL:0002031!1.07e-30!124;CL:0000037!2.22e-29!172;CL:0000566!2.22e-29!172;CL:0000988!8.16e-28!182;CL:0000945!1.25e-27!24;CL:0000826!1.25e-27!24;CL:0002032!1.36e-27!165;CL:0000837!1.36e-27!165;CL:0000557!4.09e-24!71;CL:0002009!5.25e-24!65;CL:0002194!4.66e-22!63;CL:0000576!4.66e-22!63;CL:0000040!4.66e-22!63;CL:0000559!4.66e-22!63;CL:0000839!2.42e-20!70;CL:0000236!7.10e-19!14;CL:0000766!1.64e-18!76;CL:0000763!2.41e-17!112;CL:0000049!2.41e-17!112;CL:0002057!2.89e-16!42;CL:0000860!1.56e-14!45;CL:0000542!9.52e-10!53;CL:0000051!9.52e-10!53;CL:0000838!5.14e-09!52;CL:0000990!1.35e-08!8;CL:0000453!9.33e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.77e-66;24!CL:0000236;3.50e-44;13!CL:0000542;2.70e-19;53!CL:0000840;2.55e-13;5!CL:0000235;5.35e-13;6!CL:0002087;6.26e-12;104!CL:0000738;8.20e-11;136!CL:0002619;2.77e-10;3!CL:0000990;8.89e-09;8!CL:0001014;5.38e-08;2!CL:0001016;5.38e-08;2!CL:0000988;2.03e-07;177!CL:0000451;4.02e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.79e-66,24;CL:0000826,1.79e-66,24;CL:0000236,2.79e-47,14;CL:0002087,1.43e-45,115;CL:0002031,3.51e-41,120;CL:0000738,3.53e-41,136;CL:0000037,6.69e-33,168;CL:0002032,2.11e-31,161;CL:0000837,2.11e-31,161;CL:0000988,1.15e-30,177;CL:0000542,1.66e-29,53;CL:0000051,1.66e-29,53;CL:0000838,2.31e-27,52;CL:0002009,3.39e-17,61;CL:0000557,6.96e-17,67;CL:0002194,3.89e-14,59;CL:0000576,3.89e-14,59;CL:0000040,3.89e-14,59;CL:0000559,3.89e-14,59;CL:0000840,1.29e-13,5;CL:0001029,1.29e-13,5;CL:0000235,6.03e-13,6;CL:0000839,3.45e-12,66;CL:0000817,4.42e-11,3;CL:0000766,8.01e-11,72;CL:0002619,2.25e-10,3;CL:0000134,7.56e-10,354;CL:0002320,1.89e-09,361;CL:0000990,5.73e-09,8;CL:0000763,1.42e-08,108;CL:0000049,1.42e-08,108;CL:0000473,4.09e-08,48;CL:0000234,4.09e-08,48;CL:0000219,4.71e-08,386;CL:0001014,5.29e-08,2;CL:0001016,5.29e-08,2;CL:0000785,7.19e-08,2;CL:0000955,7.19e-08,2;CL:0000818,7.19e-08,2;CL:0000954,7.19e-08,2;CL:0000816,7.19e-08,2;CL:0000451,2.83e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-19;53!CL:0000954;6.95e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.66e-30!102;UBERON:0003061!4.66e-30!102;UBERON:0002193!6.13e-29!112;UBERON:0002371!4.94e-22!80;UBERON:0001474!2.28e-19!86;UBERON:0002405!2.95e-18!115;UBERON:0007023!7.22e-18!115;UBERON:0004765!6.43e-15!101;UBERON:0001434!6.43e-15!101;UBERON:0003081!7.39e-11!216;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57 | |ontology_enrichment_uberon=UBERON:0002390!4.66e-30!102;UBERON:0003061!4.66e-30!102;UBERON:0002193!6.13e-29!112;UBERON:0002371!4.94e-22!80;UBERON:0001474!2.28e-19!86;UBERON:0002405!2.95e-18!115;UBERON:0007023!7.22e-18!115;UBERON:0004765!6.43e-15!101;UBERON:0001434!6.43e-15!101;UBERON:0003081!7.39e-11!216;UBERON:0001049!2.45e-07!57;UBERON:0005068!2.45e-07!57;UBERON:0006241!2.45e-07!57;UBERON:0007135!2.45e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.36e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.19e-21,98;UBERON:0003061,4.19e-21,98;UBERON:0002193,4.50e-20,108;UBERON:0002405,8.98e-18,93;UBERON:0002371,6.08e-16,76;UBERON:0001474,2.22e-14,82;UBERON:0004765,1.26e-12,90;UBERON:0001434,7.79e-11,100;UBERON:0002106,2.92e-10,3;UBERON:0004854,2.92e-10,3;UBERON:0009034,2.92e-10,3;UBERON:0002095,2.92e-10,3;UBERON:0004782,2.92e-10,3;UBERON:0003281,2.92e-10,3;UBERON:0009664,2.92e-10,3;UBERON:0002296,2.92e-10,3;UBERON:0005602,2.92e-10,3;UBERON:0001179,2.92e-10,3;UBERON:0006293,2.92e-10,3;UBERON:0002384,6.59e-09,371 | |||
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|short_description=p19@PDE4D | |short_description=p19@PDE4D | ||
}} | }} |
Latest revision as of 08:23, 18 September 2015
Short description: | p19@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PDE4D_5end |
Coexpression cluster: | C2115_b_myeloma_CD19_acute_non_xeroderma_Burkitt |
Association with transcript: | 0bp_to_ENST00000506510_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-21 | 98 |
blood island | 4.19e-21 | 98 |
hemolymphoid system | 4.50e-20 | 108 |
immune system | 8.98e-18 | 93 |
bone marrow | 6.08e-16 | 76 |
bone element | 2.22e-14 | 82 |
skeletal element | 1.26e-12 | 90 |
skeletal system | 7.79e-11 | 100 |
spleen | 2.92e-10 | 3 |
gastrointestinal system mesentery | 2.92e-10 | 3 |
stomach region | 2.92e-10 | 3 |
mesentery | 2.92e-10 | 3 |
gastrointestinal system serosa | 2.92e-10 | 3 |
mesentery of stomach | 2.92e-10 | 3 |
gut mesentery | 2.92e-10 | 3 |
dorsal mesentery | 2.92e-10 | 3 |
dorsal mesogastrium | 2.92e-10 | 3 |
peritoneal cavity | 2.92e-10 | 3 |
spleen primordium | 2.92e-10 | 3 |
connective tissue | 6.59e-09 | 371 |