FFCP PHASE1:Hg19::chr1:166958538..166958552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84944 | |EntrezGene=84944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25929 | |HGNC=25929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000447624_5end | |association_with_transcript=13bp_to_ENST00000447624_5end | ||
|cluster_id=chr1:166958538..166958552,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_2_at_MAEL_5end | |description=CAGE_peak_2_at_MAEL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!2.69e-13!7;CL:0000586!2.69e-13!7;CL:0002322!2.63e-10!5;CL:0002541!1.86e-08!3 | |ontology_enrichment_celltype=CL:0000039!2.69e-13!7;CL:0000586!2.69e-13!7;CL:0002322!2.63e-10!5;CL:0002541!1.86e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-23;7!CL:0000586;1.28e-23;7!CL:0000322;1.82e-07;3 | |ontology_enrichment_celltype_v019=CL:0000039;1.28e-23;7!CL:0000586;1.28e-23;7!CL:0000322;1.82e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0000322,1.82e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.45e-45;10!UBERON:0005564;6.45e-45;10!UBERON:0003124;2.97e-19;1!UBERON:0005795;4.26e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.45e-45;10!UBERON:0005564;6.45e-45;10!UBERON:0003124;2.97e-19;1!UBERON:0005795;4.26e-08;10 | ||
|ontology_enrichment_disease=DOID:1036!1.95e-11!8;DOID:4235!8.98e-07!1 | |ontology_enrichment_disease=DOID:1036!1.95e-11!8;DOID:4235!8.98e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.43e-10;2!DOID:3095;5.86e-08;22!DOID:2994;5.86e-08;22 | |ontology_enrichment_disease_v019=DOID:3910;1.43e-10;2!DOID:3095;5.86e-08;22!DOID:2994;5.86e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.43e-10,2;DOID:3095,5.66e-08,22;DOID:2994,5.66e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.21e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!2.06e-09!21;UBERON:0009196!2.06e-09!21;UBERON:0009117!2.06e-09!21;UBERON:0005564!2.06e-09!21;UBERON:0004176!5.89e-09!22;UBERON:0003101!5.89e-09!22;UBERON:0000079!5.89e-09!22;UBERON:0000476!1.86e-08!3;UBERON:0000920!1.86e-08!3;UBERON:0003124!6.88e-08!7;UBERON:0002323!9.30e-07!46 | |ontology_enrichment_uberon=UBERON:0000473!1.21e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!2.06e-09!21;UBERON:0009196!2.06e-09!21;UBERON:0009117!2.06e-09!21;UBERON:0005564!2.06e-09!21;UBERON:0004176!5.89e-09!22;UBERON:0003101!5.89e-09!22;UBERON:0000079!5.89e-09!22;UBERON:0000476!1.86e-08!3;UBERON:0000920!1.86e-08!3;UBERON:0003124!6.88e-08!7;UBERON:0002323!9.30e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.77e-56;8!UBERON:0003135;7.24e-41;11!UBERON:0000991;1.55e-21;21!UBERON:0003101;1.44e-20;22!UBERON:0000079;1.44e-20;22!UBERON:0005795;4.69e-19;1!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0002323;9.85e-09;45!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3!UBERON:0003133;2.15e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.77e-56;8!UBERON:0003135;7.24e-41;11!UBERON:0000991;1.55e-21;21!UBERON:0003101;1.44e-20;22!UBERON:0000079;1.44e-20;22!UBERON:0005795;4.69e-19;1!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0002323;9.85e-09;45!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3!UBERON:0003133;2.15e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.02e-56,8;UBERON:0003135,6.40e-41,11;UBERON:0000991,1.45e-21,21;UBERON:0009196,1.45e-21,21;UBERON:0009117,1.45e-21,21;UBERON:0005564,1.45e-21,21;UBERON:0004176,1.36e-20,22;UBERON:0003101,1.36e-20,22;UBERON:0000079,1.36e-20,22;UBERON:0003133,2.11e-13,48;UBERON:0005156,7.03e-11,59;UBERON:0000990,7.03e-11,59;UBERON:0004903,1.43e-10,2;UBERON:0002173,1.43e-10,2;UBERON:0002186,1.43e-10,2;UBERON:0002323,6.53e-10,46;UBERON:0004458,2.62e-09,49;UBERON:0003886,1.89e-08,54;UBERON:0002553,1.76e-07,61;UBERON:0004821,1.82e-07,3;UBERON:0003215,1.82e-07,3;UBERON:0010368,1.82e-07,3;UBERON:0009911,1.82e-07,3;UBERON:0002299,1.82e-07,3;UBERON:0006524,1.82e-07,3;UBERON:0008874,1.82e-07,3;UBERON:0002169,1.82e-07,3;UBERON:0004894,1.82e-07,3 | |||
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|short_description=p2@MAEL | |short_description=p2@MAEL | ||
}} | }} |
Latest revision as of 10:41, 18 September 2015
Short description: | p2@MAEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAEL_5end |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | 13bp_to_ENST00000447624_5end |
EntrezGene: | MAEL |
HGNC: | 25929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
pneumocyte | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.02e-56 | 8 |
male reproductive organ | 6.40e-41 | 11 |
gonad | 1.45e-21 | 21 |
indifferent external genitalia | 1.45e-21 | 21 |
indifferent gonad | 1.45e-21 | 21 |
gonad primordium | 1.45e-21 | 21 |
external genitalia | 1.36e-20 | 22 |
male organism | 1.36e-20 | 22 |
male reproductive system | 1.36e-20 | 22 |
reproductive organ | 2.11e-13 | 48 |
reproductive structure | 7.03e-11 | 59 |
reproductive system | 7.03e-11 | 59 |
bronchoalveolar duct junction | 1.43e-10 | 2 |
alveolar duct | 1.43e-10 | 2 |
bronchiole | 1.43e-10 | 2 |
body cavity | 6.53e-10 | 46 |
body cavity or lining | 2.62e-09 | 49 |
body cavity precursor | 1.89e-08 | 54 |
anatomical cavity | 1.76e-07 | 61 |
pulmonary alveolus epithelium | 1.82e-07 | 3 |
alveolus | 1.82e-07 | 3 |
pulmonary lobule | 1.82e-07 | 3 |
lobule | 1.82e-07 | 3 |
alveolus of lung | 1.82e-07 | 3 |
alveolar system | 1.82e-07 | 3 |
pulmonary acinus | 1.82e-07 | 3 |
alveolar sac | 1.82e-07 | 3 |
alveolar wall | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.43e-10 | 2 |
germ cell and embryonal cancer | 5.66e-08 | 22 |
germ cell cancer | 5.66e-08 | 22 |