FFCP PHASE1:Hg19::chr21:42218855..42218868,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:42218855..42218868,-
|short_description=p7@DSCAM
|description=CAGE_peak_7_at_DSCAM_5end
|association_with_transcript=170bp_to_NM_001389,uc002yyq.1,uc002yy...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1826 | |EntrezGene=1826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3039 | |HGNC=3039 | ||
|TSSclassifier=strong | |||
|UniProt=O60469 | |UniProt=O60469 | ||
|association_with_transcript=170bp_to_NM_001389,uc002yyq.1,uc002yyr.1_5end | |||
|cluster_id=chr21:42218855..42218868,- | |||
|description=CAGE_peak_7_at_DSCAM_5end | |||
|id=chr21:42218855..42218868,- | |||
|ontology_enrichment_celltype=CL:0002159!1.48e-17!13;CL:0000362!3.46e-09!8;CL:0002368!9.26e-09!13;CL:0000240!3.24e-08!6;CL:0000311!3.24e-08!6;CL:0000079!3.24e-08!6;CL:0000237!3.24e-08!6;CL:0000036!3.24e-08!6;CL:0000357!3.24e-08!6;CL:0000114!3.24e-08!6;CL:0002621!1.05e-07!3;CL:0002077!1.54e-07!33;CL:0002166!6.74e-07!3;CL:0000312!6.79e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002621;7.27e-24;3!CL:0000317;2.98e-16;2!CL:1000448;2.98e-16;2!CL:0002308;2.98e-16;2!CL:0002140;2.98e-16;2!CL:0000362;8.57e-14;9!CL:0002159;1.68e-13;14!CL:0002553;5.51e-09;1!CL:0000312;4.99e-07;5!CL:0000622;4.99e-07;5!CL:0002077;5.35e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.09e-24,3;CL:0000317,2.19e-16,2;CL:1000448,2.19e-16,2;CL:0002308,2.19e-16,2;CL:0002140,2.19e-16,2;CL:0000362,8.31e-14,9;CL:0002159,1.38e-13,14;CL:0002553,3.88e-09,1;CL:0002077,1.25e-07,34;CL:0000622,4.43e-07,5;CL:0000312,5.48e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.51e-09;1!DOID:4549;5.51e-09;1!DOID:5861;5.51e-09;1!DOID:6496;5.51e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-08,1;DOID:4549,1.07e-08,1;DOID:5861,1.07e-08,1;DOID:6496,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.40e-30!57;UBERON:0005068!7.40e-30!57;UBERON:0006241!7.40e-30!57;UBERON:0007135!7.40e-30!57;UBERON:0000924!2.43e-25!173;UBERON:0006601!2.43e-25!173;UBERON:0002616!5.89e-25!59;UBERON:0001017!9.13e-25!82;UBERON:0005743!1.67e-24!86;UBERON:0004121!4.16e-24!169;UBERON:0000073!7.34e-24!94;UBERON:0001016!7.34e-24!94;UBERON:0000955!1.41e-22!69;UBERON:0006238!1.41e-22!69;UBERON:0002780!1.46e-22!41;UBERON:0001890!1.46e-22!41;UBERON:0006240!1.46e-22!41;UBERON:0003080!7.30e-22!42;UBERON:0002346!1.09e-21!90;UBERON:0000033!1.28e-20!123;UBERON:0003075!1.78e-20!86;UBERON:0007284!1.78e-20!86;UBERON:0002020!2.61e-19!34;UBERON:0003528!2.61e-19!34;UBERON:0001893!3.99e-19!34;UBERON:0000153!4.49e-19!129;UBERON:0007811!4.49e-19!129;UBERON:0002619!1.69e-18!22;UBERON:0001950!4.11e-18!20;UBERON:0002791!1.01e-17!33;UBERON:0003056!4.81e-17!61;UBERON:0001869!7.40e-17!32;UBERON:0000956!7.71e-16!25;UBERON:0000203!7.71e-16!25;UBERON:0007023!1.13e-14!115;UBERON:0000064!3.23e-09!219;UBERON:0003076!4.27e-09!15;UBERON:0003057!4.27e-09!15;UBERON:0001871!2.21e-08!7;UBERON:0002298!2.27e-08!8;UBERON:0000200!3.45e-08!6;UBERON:0001949!1.05e-07!3;UBERON:0000483!1.12e-07!309;UBERON:0000475!1.51e-07!365;UBERON:0004733!1.79e-07!12;UBERON:0002028!1.79e-07!12;UBERON:0007277!1.79e-07!12;UBERON:0000119!1.81e-07!312;UBERON:0000988!5.52e-07!3;UBERON:0001872!7.01e-07!5;UBERON:0004732!8.37e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.27e-24;3!UBERON:0000007;2.79e-17;2!UBERON:0002419;2.98e-16;2!UBERON:0007771;2.98e-16;2!UBERON:0003297;2.98e-16;2!UBERON:0001821;2.98e-16;2!UBERON:0003487;2.98e-16;2!UBERON:0001820;2.98e-16;2!UBERON:0010371;1.82e-11;31!UBERON:0003929;1.48e-10;7!UBERON:0003350;2.67e-09;8!UBERON:0001828;2.67e-09;8!UBERON:0003296;4.36e-09;4!UBERON:0010133;4.36e-09;4!UBERON:0002902;5.51e-09;1!UBERON:0009899;5.51e-09;1!UBERON:0001003;2.42e-08;15!UBERON:0007376;2.42e-08;15!UBERON:0002021;4.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.09e-24,3;UBERON:0000007,2.81e-17,2;UBERON:0002419,2.19e-16,2;UBERON:0007771,2.19e-16,2;UBERON:0003297,2.19e-16,2;UBERON:0001821,2.19e-16,2;UBERON:0003487,2.19e-16,2;UBERON:0001820,2.19e-16,2;UBERON:0005089,2.19e-16,2;UBERON:0005088,2.19e-16,2;UBERON:0010371,1.12e-13,104;UBERON:0004121,1.27e-09,171;UBERON:0000924,1.27e-09,171;UBERON:0006601,1.27e-09,171;UBERON:0003350,1.96e-09,8;UBERON:0001828,1.96e-09,8;UBERON:0003296,4.37e-09,4;UBERON:0010133,4.37e-09,4;UBERON:0002902,5.31e-09,1;UBERON:0009899,5.31e-09,1;UBERON:0001003,2.38e-08,15;UBERON:0007376,2.38e-08,15;UBERON:0007383,2.38e-08,15;UBERON:0002021,6.00e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,2.31913023795956,1.90922284413584,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0.358234090811393,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,2.80747967488085,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,2.17781969722645,0.188287601553558,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0.361789315876224,0,0.552896299656123,1.18219047581419,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.059073520298,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0.610131324509816,0.3755727921195,0,0.221858103073705,1.05563885000352,0,0.124980407962107,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0.127894371303652,0,0.943595651135378,0,0,0.425149840203366,0,0,0,0,1.60114149657094,0,0,0.385375350578757,0,1.11743701340006,0.41023272848151,0,1.31398779682014,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0.826747186004736,0.760989722326882,0,0,0,0.175871244359621,0.127762427639595,0,0,4.85572483389305,7.05752793189023,0.0887023701626388,0,0,1.08751572762931,0.591954962065642,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0.109940516745429,0,0,0,0,0,0.942706188406504,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,3.52894871715692,0,0,0,0.143339583151451,0,0.679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.82147644146271,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,2.31913023795956,1.90922284413584,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0.358234090811393,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,2.80747967488085,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,2.17781969722645,0.188287601553558,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0.361789315876224,0,0.552896299656123,1.18219047581419,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.059073520298,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0.610131324509816,0.3755727921195,0,0.221858103073705,1.05563885000352,0,0.124980407962107,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0.127894371303652,0,0.943595651135378,0,0,0.425149840203366,0,0,0,0,1.60114149657094,0,0,0.385375350578757,0,1.11743701340006,0.41023272848151,0,1.31398779682014,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0.826747186004736,0.760989722326882,0,0,0,0.175871244359621,0.127762427639595,0,0,4.85572483389305,7.05752793189023,0.0887023701626388,0,0,1.08751572762931,0.591954962065642,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0.109940516745429,0,0,0,0,0,0.942706188406504,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,3.52894871715692,0,0,0,0.143339583151451,0,0.679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@DSCAM | |||
}} | }} |
Latest revision as of 12:06, 18 September 2015
Short description: | p7@DSCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DSCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_NM_001389, uc002yyq.1, uc002yyr.1_5end |
EntrezGene: | DSCAM |
HGNC: | 3039 |
UniProt: | O60469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.09e-24 | 3 |
sebum secreting cell | 2.19e-16 | 2 |
epithelial cell of sweat gland | 2.19e-16 | 2 |
epithelial cell of skin gland | 2.19e-16 | 2 |
acinar cell of sebaceous gland | 2.19e-16 | 2 |
epidermal cell | 8.31e-14 | 9 |
general ecto-epithelial cell | 1.38e-13 | 14 |
lung fibroblast | 3.88e-09 | 1 |
ecto-epithelial cell | 1.25e-07 | 34 |
acinar cell | 4.43e-07 | 5 |
keratinocyte | 5.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.09e-24 | 3 |
pituitary gland | 2.81e-17 | 2 |
skin gland | 2.19e-16 | 2 |
epidermis gland | 2.19e-16 | 2 |
gland of integumental system | 2.19e-16 | 2 |
sebaceous gland | 2.19e-16 | 2 |
skin sebaceous gland | 2.19e-16 | 2 |
sweat gland | 2.19e-16 | 2 |
sweat gland placode | 2.19e-16 | 2 |
sebaceous gland placode | 2.19e-16 | 2 |
ecto-epithelium | 1.12e-13 | 104 |
ectoderm-derived structure | 1.27e-09 | 171 |
ectoderm | 1.27e-09 | 171 |
presumptive ectoderm | 1.27e-09 | 171 |
epithelium of mucosa | 1.96e-09 | 8 |
gingiva | 1.96e-09 | 8 |
gland of diencephalon | 4.37e-09 | 4 |
neuroendocrine gland | 4.37e-09 | 4 |
occipital pole | 5.31e-09 | 1 |
pole of cerebral hemisphere | 5.31e-09 | 1 |
skin epidermis | 2.38e-08 | 15 |
outer epithelium | 2.38e-08 | 15 |
enveloping layer of ectoderm | 2.38e-08 | 15 |
occipital lobe | 6.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.07e-08 | 1 |
extraosseous chondrosarcoma | 1.07e-08 | 1 |
myxoid chondrosarcoma | 1.07e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.07e-08 | 1 |