FFCP PHASE1:Hg19::chr8:56864609..56864615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4067 | |EntrezGene=4067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6735 | |HGNC=6735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_AK130135_5end | |association_with_transcript=-39bp_to_AK130135_5end | ||
|cluster_id=chr8:56864609..56864615,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_LYN_5end | |description=CAGE_peak_3_at_LYN_5end | ||
|id=chr8:56864609..56864615,+ | |id=chr8:56864609..56864615,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.59e-49!172;CL:0000566!2.59e-49!172;CL:0000738!1.63e-48!140;CL:0000988!3.31e-47!182;CL:0002032!1.02e-45!165;CL:0000837!1.02e-45!165;CL:0002087!5.69e-41!119;CL:0002031!8.79e-39!124;CL:0000763!1.02e-38!112;CL:0000049!1.02e-38!112;CL:0000766!5.21e-38!76;CL:0000860!1.56e-37!45;CL:0002009!1.62e-37!65;CL:0002057!3.80e-37!42;CL:0002194!8.26e-36!63;CL:0000576!8.26e-36!63;CL:0000040!8.26e-36!63;CL:0000559!8.26e-36!63;CL:0000557!8.70e-36!71;CL:0000839!2.82e-33!70;CL:0000134!1.56e-12!358;CL:0002320!1.57e-11!365;CL:0000945!1.24e-09!24;CL:0000826!1.24e-09!24;CL:0000219!4.92e-09!390;CL:0000451!1.13e-08!10;CL:0000048!2.66e-08!430;CL:0000723!6.52e-08!436;CL:0000034!9.10e-08!444;CL:0002393!1.47e-07!9;CL:0002397!1.47e-07!9;CL:0000542!2.27e-07!53;CL:0000051!2.27e-07!53;CL:0000063!3.05e-07!578;CL:0000990!3.56e-07!8;CL:0000838!6.02e-07!52 | |ontology_enrichment_celltype=CL:0000037!2.59e-49!172;CL:0000566!2.59e-49!172;CL:0000738!1.63e-48!140;CL:0000988!3.31e-47!182;CL:0002032!1.02e-45!165;CL:0000837!1.02e-45!165;CL:0002087!5.69e-41!119;CL:0002031!8.79e-39!124;CL:0000763!1.02e-38!112;CL:0000049!1.02e-38!112;CL:0000766!5.21e-38!76;CL:0000860!1.56e-37!45;CL:0002009!1.62e-37!65;CL:0002057!3.80e-37!42;CL:0002194!8.26e-36!63;CL:0000576!8.26e-36!63;CL:0000040!8.26e-36!63;CL:0000559!8.26e-36!63;CL:0000557!8.70e-36!71;CL:0000839!2.82e-33!70;CL:0000134!1.56e-12!358;CL:0002320!1.57e-11!365;CL:0000945!1.24e-09!24;CL:0000826!1.24e-09!24;CL:0000219!4.92e-09!390;CL:0000451!1.13e-08!10;CL:0000048!2.66e-08!430;CL:0000723!6.52e-08!436;CL:0000034!9.10e-08!444;CL:0002393!1.47e-07!9;CL:0002397!1.47e-07!9;CL:0000542!2.27e-07!53;CL:0000051!2.27e-07!53;CL:0000063!3.05e-07!578;CL:0000990!3.56e-07!8;CL:0000838!6.02e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-79;33!CL:0002057;1.05e-79;33!CL:0000473;6.71e-62;39!CL:0000234;6.71e-62;39!CL:0000576;1.47e-56;48!CL:0000766;3.31e-40;69!CL:0000763;1.17e-18;100!CL:0002087;4.27e-18;104!CL:0000738;1.17e-17;136!CL:0002393;1.40e-11;6!CL:0002397;1.40e-11;6!CL:0000875;2.54e-10;3!CL:0002396;2.54e-10;3!CL:0000775;2.91e-10;3!CL:0000988;1.04e-09;177!CL:0000219;1.66e-07;193!CL:0000236;8.75e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.39e-107,42;CL:0002057,5.39e-107,42;CL:0000473,9.68e-102,48;CL:0000234,9.68e-102,48;CL:0002009,8.29e-84,61;CL:0002194,5.08e-79,59;CL:0000576,5.08e-79,59;CL:0000040,5.08e-79,59;CL:0000559,5.08e-79,59;CL:0000766,2.03e-77,72;CL:0000557,2.47e-75,67;CL:0000839,1.58e-69,66;CL:0000738,2.48e-64,136;CL:0000763,1.25e-59,108;CL:0000049,1.25e-59,108;CL:0000037,3.05e-55,168;CL:0002087,3.23e-54,115;CL:0002031,1.02e-53,120;CL:0000988,1.06e-51,177;CL:0002032,3.55e-50,161;CL:0000837,3.55e-50,161;CL:0002393,4.69e-20,9;CL:0002397,4.69e-20,9;CL:0000134,1.60e-18,354;CL:0002320,7.06e-18,361;CL:0000219,1.32e-15,386;CL:0000048,1.33e-13,427;CL:0000034,2.06e-13,441;CL:0000723,3.30e-13,433;CL:0000875,2.75e-10,3;CL:0002396,2.75e-10,3;CL:0000775,2.83e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-76;42!CL:0000049;3.39e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.74e-41!112;UBERON:0002390!4.42e-40!102;UBERON:0003061!4.42e-40!102;UBERON:0002371!1.32e-32!80;UBERON:0001474!1.58e-28!86;UBERON:0004765!8.84e-26!101;UBERON:0001434!8.84e-26!101;UBERON:0002405!5.37e-25!115;UBERON:0003081!1.45e-10!216;UBERON:0002384!1.61e-10!375;UBERON:0002204!4.14e-09!167;UBERON:0000178!1.07e-08!15;UBERON:0000179!1.07e-08!15;UBERON:0000463!1.07e-08!15 | |ontology_enrichment_uberon=UBERON:0002193!9.74e-41!112;UBERON:0002390!4.42e-40!102;UBERON:0003061!4.42e-40!102;UBERON:0002371!1.32e-32!80;UBERON:0001474!1.58e-28!86;UBERON:0004765!8.84e-26!101;UBERON:0001434!8.84e-26!101;UBERON:0002405!5.37e-25!115;UBERON:0003081!1.45e-10!216;UBERON:0002384!1.61e-10!375;UBERON:0002204!4.14e-09!167;UBERON:0000178!1.07e-08!15;UBERON:0000179!1.07e-08!15;UBERON:0000463!1.07e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.38e-08;15!UBERON:0000179;2.38e-08;15!UBERON:0000463;2.38e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-69,98;UBERON:0003061,1.88e-69,98;UBERON:0002371,3.93e-68,76;UBERON:0002193,3.59e-67,108;UBERON:0001474,2.59e-62,82;UBERON:0002405,7.08e-59,93;UBERON:0004765,9.49e-56,90;UBERON:0001434,5.21e-49,100;UBERON:0003081,8.87e-27,203;UBERON:0002204,1.27e-24,167;UBERON:0002384,5.35e-17,371;UBERON:0000926,1.18e-12,315;UBERON:0004120,1.18e-12,315;UBERON:0006603,1.18e-12,315;UBERON:0000178,2.29e-08,15;UBERON:0000179,2.29e-08,15;UBERON:0000463,2.29e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0.916960868975415,0.410502947249729,0.472264687882075,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,1.17440175733939,0,1.80490002723128,1.73608696572681,0.223915474239924,0.32389366601898,0,2.03557534291391,3.77875943688809,3.39617685662943,2.55671940596253,2.46700732813095,3.71647645074124,5.17846306179871,4.09857130446561,5.20260905754887,2.06847408441971,3.87290810150296,1.35426486594342,3.57660445130949,3.27487380069415,3.82029923556644,4.28517449319264,4.17207735198922,5.11469700639233,2.96866170168044,4.3882004676759,4.68847225585964,6.96502172708602,3.97169657283798,3.11411124497787,5.27622197039161,4.69334626578181,4.77815458351257,7.26479403160043,2.57794345191295,5.37986058649504,4.22510572623884,5.95292039902122,2.72556239160889,1.01095768031846,1.20141514273205,1.28580469357664,8.26536956849621,7.55883373356542,5.11459630540975,0,1.09227722252426,3.55803701545422,0,0,0.574752439954483,0,1.90810750907073,2.27685187643779,1.17447437874188,0.764546456250458,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.473554504088034,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.649094787309367,0.696518949197069,0.797747763113191,0.476981248610684,1.14398982156026,1.48583000531826,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0.925971025153221,2.66355813128438,0,0,0.492434012174795,0.234004265139238,1.0404181360211,0,0,0.141775097242386,0,0,0,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0.904318131178758,0,0.099972991182057,0,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0,8.23907726341901,56.8406772487647,4.55857064779639,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,2.5885704098234,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,3.82318603571188,6.26611905891579,0.952927101831156,1.23408681925858,0.648473311192717,1.62009431171434,6.34500141035416,0,0,0,0.557409525377156,0.144269212976445,0,0,1.99579371432817,0.383010740264733,0.846694330895531,0.324621940274555,0.280797178113459,0,0,0,1.18504244461122,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0.540911356951966,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0.597743964753209,0,0,0,0.615424027305347,0,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0.448788222048861,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.627921025580099,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.741383633679017,0,0.067401132980677,0,0,1.82454789215666,0,0,0.394584402849391,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.160753148465019,0.275078873194468,0.415440338029185,1.799791132412,3.0952078182318,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,1.48849806543585,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0.470531639396343,0,0,0,0,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| ||
|short_description=p3@LYN | |short_description=p3@LYN | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p3@LYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LYN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -39bp_to_AK130135_5end |
EntrezGene: | LYN |
HGNC: | 6735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.88e-69 | 98 |
blood island | 1.88e-69 | 98 |
bone marrow | 3.93e-68 | 76 |
hemolymphoid system | 3.59e-67 | 108 |
bone element | 2.59e-62 | 82 |
immune system | 7.08e-59 | 93 |
skeletal element | 9.49e-56 | 90 |
skeletal system | 5.21e-49 | 100 |
lateral plate mesoderm | 8.87e-27 | 203 |
musculoskeletal system | 1.27e-24 | 167 |
connective tissue | 5.35e-17 | 371 |
mesoderm | 1.18e-12 | 315 |
mesoderm-derived structure | 1.18e-12 | 315 |
presumptive mesoderm | 1.18e-12 | 315 |
blood | 2.29e-08 | 15 |
haemolymphatic fluid | 2.29e-08 | 15 |
organism substance | 2.29e-08 | 15 |