FFCP PHASE1:Hg19::chr1:170632723..170632739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-307bp_to_ENST00000239461_5end | |association_with_transcript=-307bp_to_ENST00000239461_5end | ||
|cluster_id=chr1:170632723..170632739,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_8_at_PRRX1_5end | |description=CAGE_peak_8_at_PRRX1_5end | ||
|id=chr1:170632723..170632739,+ | |id=chr1:170632723..170632739,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.52e-43!180;CL:0000057!7.00e-24!75;CL:0000680!1.29e-19!57;CL:0000056!1.29e-19!57;CL:0000355!1.29e-19!57;CL:0000187!1.91e-18!54;CL:0000183!1.58e-16!59;CL:0000393!6.46e-16!60;CL:0000211!6.46e-16!60;CL:0000192!2.03e-13!42;CL:0000514!2.03e-13!42;CL:0002620!3.31e-13!23;CL:0000359!3.52e-12!32;CL:0000048!7.57e-11!430;CL:0000723!6.24e-10!436;CL:0000034!5.03e-09!444;CL:0002334!6.07e-09!12;CL:0002570!8.88e-07!8 | |ontology_enrichment_celltype=CL:0000055!2.52e-43!180;CL:0000057!7.00e-24!75;CL:0000680!1.29e-19!57;CL:0000056!1.29e-19!57;CL:0000355!1.29e-19!57;CL:0000187!1.91e-18!54;CL:0000183!1.58e-16!59;CL:0000393!6.46e-16!60;CL:0000211!6.46e-16!60;CL:0000192!2.03e-13!42;CL:0000514!2.03e-13!42;CL:0002620!3.31e-13!23;CL:0000359!3.52e-12!32;CL:0000048!7.57e-11!430;CL:0000723!6.24e-10!436;CL:0000034!5.03e-09!444;CL:0002334!6.07e-09!12;CL:0002570!8.88e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.90e-17;23!CL:0000359;1.97e-11;32!CL:0002334;2.93e-11;12!CL:0000057;2.42e-10;73!CL:0000187;1.39e-09;55!CL:0000192;2.41e-09;43!CL:0002320;9.00e-09;188!CL:0002570;2.31e-08;8!CL:0002539;5.48e-08;10!CL:0000393;5.67e-08;61!CL:0000211;5.67e-08;61!CL:0000499;7.79e-08;28!CL:0000188;1.09e-07;9!CL:0000723;1.15e-07;61!CL:0000134;3.49e-07;55!CL:0000327;7.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.81e-28,76;CL:0000048,2.17e-22,427;CL:0000723,2.28e-21,433;CL:0000034,4.67e-20,441;CL:0000680,7.47e-18,58;CL:0000056,7.47e-18,58;CL:0000355,7.47e-18,58;CL:0002620,3.44e-17,23;CL:0000187,2.06e-16,55;CL:0000393,1.70e-13,61;CL:0000211,1.70e-13,61;CL:0000359,1.05e-11,32;CL:0000192,1.07e-11,43;CL:0000514,1.07e-11,43;CL:0002334,2.66e-11,12;CL:0002320,6.44e-11,361;CL:0000134,3.40e-10,354;CL:0002570,1.88e-08,8;CL:0000219,1.90e-08,386;CL:0002539,5.01e-08,10;CL:0000499,6.61e-08,28;CL:0000188,1.21e-07,9;CL:0000327,7.15e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.47e-10;58!CL:0000514;2.41e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.50e-30!83;UBERON:0002329!4.50e-30!83;UBERON:0003077!4.50e-30!83;UBERON:0003059!4.50e-30!83;UBERON:0007282!4.50e-30!83;UBERON:0009618!4.50e-30!83;UBERON:0007285!4.50e-30!83;UBERON:0004290!3.04e-27!70;UBERON:0000486!1.37e-22!82;UBERON:0001134!5.30e-22!61;UBERON:0002036!5.30e-22!61;UBERON:0003082!5.30e-22!61;UBERON:0002385!3.11e-21!63;UBERON:0001015!3.11e-21!63;UBERON:0000383!3.11e-21!63;UBERON:0000475!6.73e-16!365;UBERON:0003102!1.08e-15!95;UBERON:0002199!2.59e-13!45;UBERON:0002416!2.59e-13!45;UBERON:0005256!2.09e-12!143;UBERON:0002097!1.46e-10!40;UBERON:0004872!1.43e-09!84;UBERON:0001637!3.15e-09!42;UBERON:0003509!3.15e-09!42;UBERON:0004572!3.15e-09!42;UBERON:0001013!3.88e-09!14;UBERON:0002100!7.85e-09!216;UBERON:0004573!1.00e-08!33;UBERON:0004571!1.00e-08!33;UBERON:0000479!6.81e-07!787;UBERON:0001981!9.98e-07!60;UBERON:0007500!9.98e-07!60;UBERON:0004537!9.98e-07!60;UBERON:0006965!9.98e-07!60 | |ontology_enrichment_uberon=UBERON:0000914!4.50e-30!83;UBERON:0002329!4.50e-30!83;UBERON:0003077!4.50e-30!83;UBERON:0003059!4.50e-30!83;UBERON:0007282!4.50e-30!83;UBERON:0009618!4.50e-30!83;UBERON:0007285!4.50e-30!83;UBERON:0004290!3.04e-27!70;UBERON:0000486!1.37e-22!82;UBERON:0001134!5.30e-22!61;UBERON:0002036!5.30e-22!61;UBERON:0003082!5.30e-22!61;UBERON:0002385!3.11e-21!63;UBERON:0001015!3.11e-21!63;UBERON:0000383!3.11e-21!63;UBERON:0000475!6.73e-16!365;UBERON:0003102!1.08e-15!95;UBERON:0002199!2.59e-13!45;UBERON:0002416!2.59e-13!45;UBERON:0005256!2.09e-12!143;UBERON:0002097!1.46e-10!40;UBERON:0004872!1.43e-09!84;UBERON:0001637!3.15e-09!42;UBERON:0003509!3.15e-09!42;UBERON:0004572!3.15e-09!42;UBERON:0001013!3.88e-09!14;UBERON:0002100!7.85e-09!216;UBERON:0004573!1.00e-08!33;UBERON:0004571!1.00e-08!33;UBERON:0000479!6.81e-07!787;UBERON:0001981!9.98e-07!60;UBERON:0007500!9.98e-07!60;UBERON:0004537!9.98e-07!60;UBERON:0006965!9.98e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.21e-14;31!UBERON:0001015;7.21e-14;31!UBERON:0000383;7.21e-14;31!UBERON:0001134;3.49e-12;16!UBERON:0002036;3.49e-12;16!UBERON:0002199;1.56e-11;46!UBERON:0002416;1.56e-11;46!UBERON:0001013;1.96e-11;14!UBERON:0004573;5.77e-11;33!UBERON:0004571;5.77e-11;33!UBERON:0002097;7.46e-11;41!UBERON:0002204;1.48e-10;70!UBERON:0003102;1.93e-10;50!UBERON:0002384;2.15e-10;198!UBERON:0002067;2.26e-08;9!UBERON:0004237;5.48e-08;10!UBERON:0004695;5.48e-08;10!UBERON:0002111;5.48e-08;10!UBERON:0004178;5.48e-08;10!UBERON:0001637;1.50e-07;42!UBERON:0003509;1.50e-07;42!UBERON:0004572;1.50e-07;42!UBERON:0001434;7.03e-07;36!UBERON:0000947;7.99e-07;21!UBERON:0010191;7.99e-07;21 | |||
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| ||
|short_description=p8@PRRX1 | |short_description=p8@PRRX1 | ||
}} | }} |
Latest revision as of 14:17, 18 September 2015
Short description: | p8@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | -307bp_to_ENST00000239461_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.81e-28 | 76 |
multi fate stem cell | 2.17e-22 | 427 |
somatic stem cell | 2.28e-21 | 433 |
stem cell | 4.67e-20 | 441 |
muscle precursor cell | 7.47e-18 | 58 |
myoblast | 7.47e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.47e-18 | 58 |
skin fibroblast | 3.44e-17 | 23 |
muscle cell | 2.06e-16 | 55 |
electrically responsive cell | 1.70e-13 | 61 |
electrically active cell | 1.70e-13 | 61 |
vascular associated smooth muscle cell | 1.05e-11 | 32 |
smooth muscle cell | 1.07e-11 | 43 |
smooth muscle myoblast | 1.07e-11 | 43 |
preadipocyte | 2.66e-11 | 12 |
connective tissue cell | 6.44e-11 | 361 |
mesenchymal cell | 3.40e-10 | 354 |
mesenchymal stem cell of adipose | 1.88e-08 | 8 |
motile cell | 1.90e-08 | 386 |
aortic smooth muscle cell | 5.01e-08 | 10 |
stromal cell | 6.61e-08 | 28 |
cell of skeletal muscle | 1.21e-07 | 9 |
extracellular matrix secreting cell | 7.15e-07 | 15 |