FFCP PHASE1:Hg19::chr1:170633348..170633399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=35bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=35bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633348..170633399,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_2_at_PRRX1_5end | |description=CAGE_peak_2_at_PRRX1_5end | ||
|id=chr1:170633348..170633399,+ | |id=chr1:170633348..170633399,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.25e-46!180;CL:0000057!2.55e-25!75;CL:0000680!1.44e-17!57;CL:0000056!1.44e-17!57;CL:0000355!1.44e-17!57;CL:0000187!6.87e-17!54;CL:0000183!1.33e-15!59;CL:0000393!8.51e-15!60;CL:0000211!8.51e-15!60;CL:0002620!3.55e-12!23;CL:0000192!4.81e-12!42;CL:0000514!4.81e-12!42;CL:0000359!1.52e-10!32 | |ontology_enrichment_celltype=CL:0000055!9.25e-46!180;CL:0000057!2.55e-25!75;CL:0000680!1.44e-17!57;CL:0000056!1.44e-17!57;CL:0000355!1.44e-17!57;CL:0000187!6.87e-17!54;CL:0000183!1.33e-15!59;CL:0000393!8.51e-15!60;CL:0000211!8.51e-15!60;CL:0002620!3.55e-12!23;CL:0000192!4.81e-12!42;CL:0000514!4.81e-12!42;CL:0000359!1.52e-10!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.24e-13;23!CL:0000359;9.72e-11;32!CL:0000057;1.66e-10;73!CL:0000187;3.55e-10;55!CL:0000192;1.50e-09;43!CL:0000393;5.14e-09;61!CL:0000211;5.14e-09;61!CL:0002320;1.61e-07;188!CL:0002334;9.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-25,76;CL:0000680,1.05e-18,58;CL:0000056,1.05e-18,58;CL:0000355,1.05e-18,58;CL:0000187,5.69e-18,55;CL:0000393,5.46e-16,61;CL:0000211,5.46e-16,61;CL:0002620,5.42e-13,23;CL:0000192,9.02e-13,43;CL:0000514,9.02e-13,43;CL:0000359,3.11e-11,32;CL:0000048,4.25e-09,427;CL:0000723,3.16e-08,433;CL:0000034,3.77e-07,441;CL:0002334,9.07e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;3.34e-10;58!CL:0000514;1.50e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.14e-28!83;UBERON:0002329!5.14e-28!83;UBERON:0003077!5.14e-28!83;UBERON:0003059!5.14e-28!83;UBERON:0007282!5.14e-28!83;UBERON:0009618!5.14e-28!83;UBERON:0007285!5.14e-28!83;UBERON:0004290!7.11e-25!70;UBERON:0001134!1.64e-19!61;UBERON:0002036!1.64e-19!61;UBERON:0003082!1.64e-19!61;UBERON:0000486!1.67e-19!82;UBERON:0002385!2.82e-19!63;UBERON:0001015!2.82e-19!63;UBERON:0000383!2.82e-19!63;UBERON:0000475!8.25e-18!365;UBERON:0003102!1.12e-13!95;UBERON:0000481!4.20e-12!347;UBERON:0000468!4.41e-11!659;UBERON:0004872!5.53e-11!84;UBERON:0005256!5.96e-11!143;UBERON:0002199!6.12e-11!45;UBERON:0002416!6.12e-11!45;UBERON:0002097!1.63e-09!40;UBERON:0000479!2.40e-09!787;UBERON:0007100!4.29e-09!27;UBERON:0000119!5.30e-09!312;UBERON:0000948!1.80e-08!24;UBERON:0005498!1.80e-08!24;UBERON:0004140!1.80e-08!24;UBERON:0009881!1.80e-08!24;UBERON:0004141!1.80e-08!24;UBERON:0003084!1.80e-08!24;UBERON:0007005!1.80e-08!24;UBERON:0004139!1.80e-08!24;UBERON:0004291!1.80e-08!24;UBERON:0000483!2.53e-08!309;UBERON:0007023!3.64e-08!115;UBERON:0001637!3.68e-08!42;UBERON:0003509!3.68e-08!42;UBERON:0004572!3.68e-08!42;UBERON:0004121!1.68e-07!169;UBERON:0004573!1.87e-07!33;UBERON:0004571!1.87e-07!33;UBERON:0000467!2.25e-07!625;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0000480!3.18e-07!626;UBERON:0001981!4.02e-07!60;UBERON:0007500!4.02e-07!60;UBERON:0004537!4.02e-07!60;UBERON:0006965!4.02e-07!60;UBERON:0002067!4.69e-07!9;UBERON:0004016!4.69e-07!9;UBERON:0010083!4.69e-07!9;UBERON:0000153!5.75e-07!129;UBERON:0007811!5.75e-07!129;UBERON:0000033!6.41e-07!123;UBERON:0001013!8.34e-07!14;UBERON:0002100!8.58e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!5.14e-28!83;UBERON:0002329!5.14e-28!83;UBERON:0003077!5.14e-28!83;UBERON:0003059!5.14e-28!83;UBERON:0007282!5.14e-28!83;UBERON:0009618!5.14e-28!83;UBERON:0007285!5.14e-28!83;UBERON:0004290!7.11e-25!70;UBERON:0001134!1.64e-19!61;UBERON:0002036!1.64e-19!61;UBERON:0003082!1.64e-19!61;UBERON:0000486!1.67e-19!82;UBERON:0002385!2.82e-19!63;UBERON:0001015!2.82e-19!63;UBERON:0000383!2.82e-19!63;UBERON:0000475!8.25e-18!365;UBERON:0003102!1.12e-13!95;UBERON:0000481!4.20e-12!347;UBERON:0000468!4.41e-11!659;UBERON:0004872!5.53e-11!84;UBERON:0005256!5.96e-11!143;UBERON:0002199!6.12e-11!45;UBERON:0002416!6.12e-11!45;UBERON:0002097!1.63e-09!40;UBERON:0000479!2.40e-09!787;UBERON:0007100!4.29e-09!27;UBERON:0000119!5.30e-09!312;UBERON:0000948!1.80e-08!24;UBERON:0005498!1.80e-08!24;UBERON:0004140!1.80e-08!24;UBERON:0009881!1.80e-08!24;UBERON:0004141!1.80e-08!24;UBERON:0003084!1.80e-08!24;UBERON:0007005!1.80e-08!24;UBERON:0004139!1.80e-08!24;UBERON:0004291!1.80e-08!24;UBERON:0000483!2.53e-08!309;UBERON:0007023!3.64e-08!115;UBERON:0001637!3.68e-08!42;UBERON:0003509!3.68e-08!42;UBERON:0004572!3.68e-08!42;UBERON:0004121!1.68e-07!169;UBERON:0004573!1.87e-07!33;UBERON:0004571!1.87e-07!33;UBERON:0000467!2.25e-07!625;UBERON:0000924!2.35e-07!173;UBERON:0006601!2.35e-07!173;UBERON:0000480!3.18e-07!626;UBERON:0001981!4.02e-07!60;UBERON:0007500!4.02e-07!60;UBERON:0004537!4.02e-07!60;UBERON:0006965!4.02e-07!60;UBERON:0002067!4.69e-07!9;UBERON:0004016!4.69e-07!9;UBERON:0010083!4.69e-07!9;UBERON:0000153!5.75e-07!129;UBERON:0007811!5.75e-07!129;UBERON:0000033!6.41e-07!123;UBERON:0001013!8.34e-07!14;UBERON:0002100!8.58e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.36e-12;31!UBERON:0001015;3.36e-12;31!UBERON:0000383;3.36e-12;31!UBERON:0002204;1.50e-09;70!UBERON:0007100;7.63e-09;25!UBERON:0002384;9.86e-09;198!UBERON:0001134;1.11e-08;16!UBERON:0002036;1.11e-08;16!UBERON:0000948;3.60e-08;22!UBERON:0002097;6.77e-08;41!UBERON:0002199;8.38e-08;46!UBERON:0002416;8.38e-08;46!UBERON:0002067;1.81e-07;9!UBERON:0003102;2.59e-07;50!UBERON:0001013;3.12e-07;14!UBERON:0004573;4.37e-07;33!UBERON:0004571;4.37e-07;33 | |||
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| ||
|short_description=p2@PRRX1 | |short_description=p2@PRRX1 | ||
}} | }} |
Latest revision as of 14:27, 18 September 2015
Short description: | p2@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | 35bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-25 | 76 |
muscle precursor cell | 1.05e-18 | 58 |
myoblast | 1.05e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-18 | 58 |
muscle cell | 5.69e-18 | 55 |
electrically responsive cell | 5.46e-16 | 61 |
electrically active cell | 5.46e-16 | 61 |
skin fibroblast | 5.42e-13 | 23 |
smooth muscle cell | 9.02e-13 | 43 |
smooth muscle myoblast | 9.02e-13 | 43 |
vascular associated smooth muscle cell | 3.11e-11 | 32 |
multi fate stem cell | 4.25e-09 | 427 |
somatic stem cell | 3.16e-08 | 433 |
stem cell | 3.77e-07 | 441 |
preadipocyte | 9.07e-07 | 12 |