FFCP PHASE1:Hg19::chr1:173836874..173836885,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=619498 | |EntrezGene=619498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32734 | |HGNC=32734 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_002579,uc001gjo.1_5end | |association_with_transcript=0bp_to_NR_002579,uc001gjo.1_5end | ||
|cluster_id=chr1:173836874..173836885,- | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD74_5end | |description=CAGE_peak_1_at_SNORD74_5end | ||
|id=chr1:173836874..173836885,- | |id=chr1:173836874..173836885,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.45e-12;2!CL:1000448;2.45e-12;2!CL:0002262;2.45e-12;2!CL:0002308;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0002140;2.45e-12;2!CL:0000362;9.23e-11;9!CL:0002541;1.17e-08;3!CL:0000632;1.17e-08;3!CL:0002159;3.04e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.32e-12,2;CL:1000398,2.32e-12,2;CL:0000317,2.59e-12,2;CL:1000448,2.59e-12,2;CL:0002308,2.59e-12,2;CL:0002140,2.59e-12,2;CL:0000362,1.02e-10,9;CL:0000632,1.04e-08,3;CL:0002541,1.40e-08,3;CL:0002159,3.24e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.03e-12!235;DOID:14566!8.34e-12!239;DOID:0050687!6.47e-10!143;DOID:305!5.01e-07!106 | |ontology_enrichment_disease=DOID:162!1.03e-12!235;DOID:14566!8.34e-12!239;DOID:0050687!6.47e-10!143;DOID:305!5.01e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.45e-12;2!UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0007771;2.45e-12;2!UBERON:0003297;2.45e-12;2!UBERON:0001821;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0003487;2.45e-12;2!UBERON:0001820;2.45e-12;2!UBERON:0003124;1.17e-08;3!UBERON:0000920;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0002365;6.63e-07;31!UBERON:0002330;6.63e-07;31!UBERON:0001003;8.09e-07;15!UBERON:0007376;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.32e-12,2;UBERON:0003497,2.32e-12,2;UBERON:0003909,2.32e-12,2;UBERON:0003835,2.32e-12,2;UBERON:0002419,2.59e-12,2;UBERON:0007771,2.59e-12,2;UBERON:0003297,2.59e-12,2;UBERON:0001821,2.59e-12,2;UBERON:0003487,2.59e-12,2;UBERON:0001820,2.59e-12,2;UBERON:0005089,2.59e-12,2;UBERON:0005088,2.59e-12,2;UBERON:0001280,1.12e-08,3;UBERON:0004647,1.12e-08,3;UBERON:0005171,1.12e-08,3;UBERON:0000920,1.40e-08,3;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31;UBERON:0001003,8.58e-07,15;UBERON:0007376,8.58e-07,15;UBERON:0007383,8.58e-07,15 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.393553906568396,0,0,0.154816123316076,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.900273288253207,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0,0.504867548488229,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.435758888184812,0,0,0.392442930250692,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,16.90605505112,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.448340575974109,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0,0.290033387828457,0.0852266274161009,0,0,0.384380134730212,0.893288987462089,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.144269212976445,0,0,0.399158742865633,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0.677167111206413,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0.494411622680279,0.211125408127993,0,0.276283915531148,0.503865495708552,0.20453736500431,0.615424027305347,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.341380344856499,0,0.709163045303809,0.689486746482929,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.46112780877612,0.269272933229316,0.325942115766024,0,0,1.06606955203727,0,0.470940769185074,0.332423363800313,0.225595660617181,0.392125068635479,0.335643173951685,0,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0,0,0,0,0.547364367646998,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.246346371159628,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0.864328787928898,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.196854963029498,0.338693328263138,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0.211200673038813,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,1.58089305518355,0.365377795142688,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.830091809617385,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,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| ||
|short_description=p1@SNORD74 | |short_description=p1@SNORD74 | ||
}} | }} |
Latest revision as of 18:19, 18 September 2015
Short description: | p1@SNORD74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD74_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_NR_002579, uc001gjo.1_5end |
EntrezGene: | SNORD74 |
HGNC: | 32734 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.32e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.32e-12 | 2 |
sebum secreting cell | 2.59e-12 | 2 |
epithelial cell of sweat gland | 2.59e-12 | 2 |
epithelial cell of skin gland | 2.59e-12 | 2 |
acinar cell of sebaceous gland | 2.59e-12 | 2 |
epidermal cell | 1.02e-10 | 9 |
hepatic stellate cell | 1.04e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
general ecto-epithelial cell | 3.24e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.32e-12 | 2 |
abdomen blood vessel | 2.32e-12 | 2 |
sinusoid | 2.32e-12 | 2 |
abdominal segment blood vessel | 2.32e-12 | 2 |
skin gland | 2.59e-12 | 2 |
epidermis gland | 2.59e-12 | 2 |
gland of integumental system | 2.59e-12 | 2 |
sebaceous gland | 2.59e-12 | 2 |
skin sebaceous gland | 2.59e-12 | 2 |
sweat gland | 2.59e-12 | 2 |
sweat gland placode | 2.59e-12 | 2 |
sebaceous gland placode | 2.59e-12 | 2 |
liver parenchyma | 1.12e-08 | 3 |
liver lobule | 1.12e-08 | 3 |
hepatic duct | 1.12e-08 | 3 |
egg chorion | 1.40e-08 | 3 |
exocrine gland | 4.77e-07 | 31 |
exocrine system | 4.77e-07 | 31 |
skin epidermis | 8.58e-07 | 15 |
outer epithelium | 8.58e-07 | 15 |
enveloping layer of ectoderm | 8.58e-07 | 15 |