FFCP PHASE1:Hg19::chr12:51402938..51402955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4891 | |EntrezGene=4891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10908 | |HGNC=10908 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000549193_5end | |association_with_transcript=0bp_to_ENST00000549193_5end | ||
|cluster_id=chr12:51402938..51402955,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_7_at_SLC11A2_5end | |description=CAGE_peak_7_at_SLC11A2_5end | ||
|id=chr12:51402938..51402955,- | |id=chr12:51402938..51402955,- | ||
|ontology_enrichment_celltype=CL:0000557!1.80e-54!71;CL:0000766!1.02e-53!76;CL:0000839!3.61e-53!70;CL:0002009!1.52e-49!65;CL:0002194!2.68e-49!63;CL:0000576!2.68e-49!63;CL:0000040!2.68e-49!63;CL:0000559!2.68e-49!63;CL:0002057!3.10e-42!42;CL:0000860!1.63e-38!45;CL:0000763!3.44e-34!112;CL:0000049!3.44e-34!112;CL:0000738!1.12e-26!140;CL:0002031!2.79e-24!124;CL:0002087!3.41e-21!119;CL:0000037!1.15e-19!172;CL:0000566!1.15e-19!172;CL:0002032!7.21e-18!165;CL:0000837!7.21e-18!165;CL:0000988!1.62e-17!182;CL:0002274!2.50e-07!5;CL:0000457!2.50e-07!5;CL:0002191!2.50e-07!5;CL:0000097!2.50e-07!5;CL:0000831!2.50e-07!5;CL:0002028!2.50e-07!5 | |ontology_enrichment_celltype=CL:0000557!1.80e-54!71;CL:0000766!1.02e-53!76;CL:0000839!3.61e-53!70;CL:0002009!1.52e-49!65;CL:0002194!2.68e-49!63;CL:0000576!2.68e-49!63;CL:0000040!2.68e-49!63;CL:0000559!2.68e-49!63;CL:0002057!3.10e-42!42;CL:0000860!1.63e-38!45;CL:0000763!3.44e-34!112;CL:0000049!3.44e-34!112;CL:0000738!1.12e-26!140;CL:0002031!2.79e-24!124;CL:0002087!3.41e-21!119;CL:0000037!1.15e-19!172;CL:0000566!1.15e-19!172;CL:0002032!7.21e-18!165;CL:0000837!7.21e-18!165;CL:0000988!1.62e-17!182;CL:0002274!2.50e-07!5;CL:0000457!2.50e-07!5;CL:0002191!2.50e-07!5;CL:0000097!2.50e-07!5;CL:0000831!2.50e-07!5;CL:0002028!2.50e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.15e-87;39!CL:0000234;7.15e-87;39!CL:0000860;8.96e-86;33!CL:0002057;8.96e-86;33!CL:0000576;9.37e-60;48!CL:0000766;1.25e-43;69!CL:0000235;7.70e-24;6!CL:0000763;1.39e-20;100!CL:0002087;7.45e-15;104!CL:0000738;1.43e-14;136!CL:0002619;1.71e-13;3!CL:0000988;8.72e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.52e-114,61;CL:0002194,5.89e-113,59;CL:0000576,5.89e-113,59;CL:0000040,5.89e-113,59;CL:0000559,5.89e-113,59;CL:0000473,7.82e-110,48;CL:0000234,7.82e-110,48;CL:0000557,1.13e-108,67;CL:0000839,2.10e-105,66;CL:0000766,5.34e-96,72;CL:0000860,8.75e-88,42;CL:0002057,8.75e-88,42;CL:0000763,2.31e-64,108;CL:0000049,2.31e-64,108;CL:0002031,4.56e-57,120;CL:0002087,4.43e-54,115;CL:0000738,2.52e-49,136;CL:0002032,2.76e-40,161;CL:0000837,2.76e-40,161;CL:0000037,3.13e-38,168;CL:0000988,7.91e-36,177;CL:0000235,7.72e-24,6;CL:0000134,3.42e-14,354;CL:0002320,9.87e-14,361;CL:0002619,1.42e-13,3;CL:0000219,4.11e-12,386;CL:0000034,2.88e-10,441;CL:0000048,3.94e-10,427;CL:0000723,7.39e-10,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-66;42!CL:0000049;1.22e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.11e-50!80;UBERON:0001474!4.36e-45!86;UBERON:0002390!2.72e-43!102;UBERON:0003061!2.72e-43!102;UBERON:0002193!1.79e-40!112;UBERON:0004765!7.08e-37!101;UBERON:0001434!7.08e-37!101;UBERON:0002405!3.78e-36!115;UBERON:0002204!7.29e-19!167;UBERON:0003081!1.15e-14!216;UBERON:0007023!1.47e-13!115;UBERON:0001049!1.67e-12!57;UBERON:0005068!1.67e-12!57;UBERON:0006241!1.67e-12!57;UBERON:0007135!1.67e-12!57;UBERON:0002780!7.07e-11!41;UBERON:0001890!7.07e-11!41;UBERON:0006240!7.07e-11!41;UBERON:0002616!1.16e-10!59;UBERON:0003080!1.77e-10!42;UBERON:0000062!1.05e-09!511;UBERON:0001017!5.06e-09!82;UBERON:0005743!6.55e-09!86;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0001893!5.74e-08!34;UBERON:0000955!7.44e-08!69;UBERON:0006238!7.44e-08!69;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0002791!2.20e-07!33;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0002346!5.38e-07!90;UBERON:0001869!7.86e-07!32;UBERON:0003056!8.05e-07!61;UBERON:0000923!9.81e-07!604;UBERON:0005291!9.81e-07!604;UBERON:0006598!9.81e-07!604;UBERON:0002532!9.81e-07!604 | |ontology_enrichment_uberon=UBERON:0002371!6.11e-50!80;UBERON:0001474!4.36e-45!86;UBERON:0002390!2.72e-43!102;UBERON:0003061!2.72e-43!102;UBERON:0002193!1.79e-40!112;UBERON:0004765!7.08e-37!101;UBERON:0001434!7.08e-37!101;UBERON:0002405!3.78e-36!115;UBERON:0002204!7.29e-19!167;UBERON:0003081!1.15e-14!216;UBERON:0007023!1.47e-13!115;UBERON:0001049!1.67e-12!57;UBERON:0005068!1.67e-12!57;UBERON:0006241!1.67e-12!57;UBERON:0007135!1.67e-12!57;UBERON:0002780!7.07e-11!41;UBERON:0001890!7.07e-11!41;UBERON:0006240!7.07e-11!41;UBERON:0002616!1.16e-10!59;UBERON:0003080!1.77e-10!42;UBERON:0000062!1.05e-09!511;UBERON:0001017!5.06e-09!82;UBERON:0005743!6.55e-09!86;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0001893!5.74e-08!34;UBERON:0000955!7.44e-08!69;UBERON:0006238!7.44e-08!69;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0002791!2.20e-07!33;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0002346!5.38e-07!90;UBERON:0001869!7.86e-07!32;UBERON:0003056!8.05e-07!61;UBERON:0000923!9.81e-07!604;UBERON:0005291!9.81e-07!604;UBERON:0006598!9.81e-07!604;UBERON:0002532!9.81e-07!604 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.56e-95,76;UBERON:0001474,2.17e-87,82;UBERON:0002405,8.22e-80,93;UBERON:0004765,6.62e-79,90;UBERON:0002390,8.64e-72,98;UBERON:0003061,8.64e-72,98;UBERON:0001434,3.46e-70,100;UBERON:0002193,1.46e-67,108;UBERON:0002204,1.63e-38,167;UBERON:0003081,1.00e-31,203;UBERON:0000926,3.41e-18,315;UBERON:0004120,3.41e-18,315;UBERON:0006603,3.41e-18,315;UBERON:0002384,4.18e-13,371;UBERON:0000923,4.34e-07,560;UBERON:0010316,4.34e-07,560;UBERON:0005291,4.34e-07,560;UBERON:0006598,4.34e-07,560;UBERON:0010317,4.34e-07,560;UBERON:0002532,4.34e-07,560;UBERON:0002050,5.74e-07,564 | |||
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|short_description=p7@SLC11A2 | |short_description=p7@SLC11A2 | ||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p7@SLC11A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC11A2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000549193_5end |
EntrezGene: | SLC11A2 |
HGNC: | 10908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.52e-114 | 61 |
monopoietic cell | 5.89e-113 | 59 |
monocyte | 5.89e-113 | 59 |
monoblast | 5.89e-113 | 59 |
promonocyte | 5.89e-113 | 59 |
defensive cell | 7.82e-110 | 48 |
phagocyte | 7.82e-110 | 48 |
granulocyte monocyte progenitor cell | 1.13e-108 | 67 |
myeloid lineage restricted progenitor cell | 2.10e-105 | 66 |
myeloid leukocyte | 5.34e-96 | 72 |
classical monocyte | 8.75e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.75e-88 | 42 |
myeloid cell | 2.31e-64 | 108 |
common myeloid progenitor | 2.31e-64 | 108 |
hematopoietic lineage restricted progenitor cell | 4.56e-57 | 120 |
nongranular leukocyte | 4.43e-54 | 115 |
leukocyte | 2.52e-49 | 136 |
hematopoietic oligopotent progenitor cell | 2.76e-40 | 161 |
hematopoietic multipotent progenitor cell | 2.76e-40 | 161 |
hematopoietic stem cell | 3.13e-38 | 168 |
hematopoietic cell | 7.91e-36 | 177 |
macrophage | 7.72e-24 | 6 |
mesenchymal cell | 3.42e-14 | 354 |
connective tissue cell | 9.87e-14 | 361 |
adult endothelial progenitor cell | 1.42e-13 | 3 |
motile cell | 4.11e-12 | 386 |
stem cell | 2.88e-10 | 441 |
multi fate stem cell | 3.94e-10 | 427 |
somatic stem cell | 7.39e-10 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.56e-95 | 76 |
bone element | 2.17e-87 | 82 |
immune system | 8.22e-80 | 93 |
skeletal element | 6.62e-79 | 90 |
hematopoietic system | 8.64e-72 | 98 |
blood island | 8.64e-72 | 98 |
skeletal system | 3.46e-70 | 100 |
hemolymphoid system | 1.46e-67 | 108 |
musculoskeletal system | 1.63e-38 | 167 |
lateral plate mesoderm | 1.00e-31 | 203 |
mesoderm | 3.41e-18 | 315 |
mesoderm-derived structure | 3.41e-18 | 315 |
presumptive mesoderm | 3.41e-18 | 315 |
connective tissue | 4.18e-13 | 371 |
germ layer | 4.34e-07 | 560 |
germ layer / neural crest | 4.34e-07 | 560 |
embryonic tissue | 4.34e-07 | 560 |
presumptive structure | 4.34e-07 | 560 |
germ layer / neural crest derived structure | 4.34e-07 | 560 |
epiblast (generic) | 4.34e-07 | 560 |
embryonic structure | 5.74e-07 | 564 |