FFCP PHASE1:Hg19::chr6:42141112..42141149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4678 | |||
|TSSclassifier=strong | |||
|UniProt=P43080 | |||
|association_with_transcript=83bp_to_ENST00000372958_5end | |||
|cluster_id=chr6:42141112..42141149,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_GUCA1A_5end | |||
|id=chr6:42141112..42141149,+ | |||
|ontology_enrichment_celltype=CL:0002097!7.03e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.61e-08;4!CL:0002222;2.61e-08;4!CL:0002224;2.61e-08;4!CL:0000243;1.33e-07;15!CL:0000125;1.33e-07;15!CL:0000095;6.77e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4;CL:0000243,1.33e-07,15;CL:0000125,1.33e-07,15;CL:0000030,1.33e-07,15;CL:0000339,1.33e-07,15;CL:0000095,6.77e-07,17;CL:0000123,6.77e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.18e-38;3!UBERON:0006238;3.14e-11;10!CL:0000339;1.33e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.24e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.24e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.73e-28!2;UBERON:0002757!4.73e-28!2;UBERON:0010134!4.73e-28!2;UBERON:0002784!4.73e-28!2;UBERON:0005408!4.73e-28!2;UBERON:0001899!4.73e-28!2;UBERON:0002346!4.50e-23!90;UBERON:0003075!1.54e-20!86;UBERON:0007284!1.54e-20!86;UBERON:0002240!1.77e-18!3;UBERON:0000970!1.09e-16!20;UBERON:0002104!6.75e-16!21;UBERON:0003296!1.51e-14!4;UBERON:0010133!1.51e-14!4;UBERON:0000020!1.62e-14!23;UBERON:0005743!5.23e-14!86;UBERON:0001032!6.53e-14!24;UBERON:0004456!6.53e-14!24;UBERON:0000924!3.17e-13!173;UBERON:0006601!3.17e-13!173;UBERON:0000073!1.33e-12!94;UBERON:0001016!1.33e-12!94;UBERON:0001017!7.32e-12!82;UBERON:0000966!9.26e-12!5;UBERON:0005388!9.26e-12!5;UBERON:0001802!9.26e-12!5;UBERON:0004121!1.46e-11!169;UBERON:0005174!1.76e-11!5;UBERON:0001137!1.76e-11!5;UBERON:0000019!1.76e-11!19;UBERON:0000047!1.76e-11!19;UBERON:0004088!1.76e-11!19;UBERON:0003072!1.76e-11!19;UBERON:0003071!1.76e-11!19;UBERON:0004128!1.76e-11!19;UBERON:0001456!2.06e-10!21;UBERON:0003056!5.44e-10!61;UBERON:0001894!1.05e-08!7;UBERON:0006222!1.05e-08!7;UBERON:0003076!1.73e-08!15;UBERON:0003057!1.73e-08!15;UBERON:0002360!5.74e-08!2;UBERON:0000094!5.74e-08!2;UBERON:0007645!5.74e-08!2;UBERON:0001049!6.26e-08!57;UBERON:0005068!6.26e-08!57;UBERON:0006241!6.26e-08!57;UBERON:0007135!6.26e-08!57;UBERON:0002148!6.58e-08!2;UBERON:0009662!6.58e-08!2;UBERON:0000033!1.17e-07!123;UBERON:0005085!1.34e-07!29;UBERON:0000153!2.93e-07!129;UBERON:0007811!2.93e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.69e-57;2!UBERON:0002757;2.69e-57;2!UBERON:0010134;2.69e-57;2!UBERON:0005408;2.69e-57;2!UBERON:0001899;2.69e-57;2!UBERON:0003296;2.74e-29;4!UBERON:0010133;2.74e-29;4!UBERON:0002784;2.74e-29;4!UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0000970;4.70e-23;20!UBERON:0002104;5.48e-22;21!UBERON:0000020;3.94e-20;23!UBERON:0001032;2.56e-19;24!UBERON:0004456;2.56e-19;24!UBERON:0001894;3.15e-17;7!UBERON:0000019;4.74e-14;19!UBERON:0000047;4.74e-14;19!UBERON:0004088;4.74e-14;19!UBERON:0010230;4.74e-14;19!UBERON:0001456;8.73e-13;21!UBERON:0010077;2.61e-08;4!UBERON:0005389;2.61e-08;4!UBERON:0000484;2.61e-08;4!UBERON:0000965;2.61e-08;4!UBERON:0001803;2.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.69e-57,2;UBERON:0002757,2.69e-57,2;UBERON:0010134,2.69e-57,2;UBERON:0005408,2.69e-57,2;UBERON:0001899,2.69e-57,2;UBERON:0003296,2.74e-29,4;UBERON:0010133,2.74e-29,4;UBERON:0002784,2.74e-29,4;UBERON:0000970,5.48e-22,21;UBERON:0002104,5.48e-22,21;UBERON:0000966,8.63e-20,6;UBERON:0005388,8.63e-20,6;UBERON:0001802,8.63e-20,6;UBERON:0000020,2.56e-19,24;UBERON:0001032,2.56e-19,24;UBERON:0004456,2.56e-19,24;UBERON:0001894,3.15e-17,7;UBERON:0006222,3.15e-17,7;UBERON:0000019,2.19e-13,20;UBERON:0000047,2.19e-13,20;UBERON:0010312,2.19e-13,20;UBERON:0004088,2.19e-13,20;UBERON:0010230,2.19e-13,20;UBERON:0003072,2.19e-13,20;UBERON:0004128,2.19e-13,20;UBERON:0003071,2.19e-13,20;UBERON:0001456,3.08e-12,22;UBERON:0003056,9.77e-12,61;UBERON:0005085,6.88e-09,31;UBERON:0003075,7.64e-09,82;UBERON:0007284,7.64e-09,82;UBERON:0002346,1.90e-08,86;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0010371,4.86e-07,104;UBERON:0000955,6.13e-07,68;UBERON:0006238,6.13e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,199.992955590771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,30.0216537811621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.99651404592,73.3098514437036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.3416505099813,3.00225862292181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GUCA1A | |||
}} |
Latest revision as of 19:45, 18 September 2015
Short description: | p2@GUCA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GUCA1A_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 83bp_to_ENST00000372958_5end |
EntrezGene: | GUCA1A |
HGNC: | 4678 |
UniProt: | P43080 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
glial cell (sensu Vertebrata) | 1.33e-07 | 15 |
glial cell | 1.33e-07 | 15 |
glioblast | 1.33e-07 | 15 |
glioblast (sensu Vertebrata) | 1.33e-07 | 15 |
neuron associated cell | 6.77e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.77e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.24e-10 | 11 |