FFCP PHASE1:Hg19::chr1:176175986..176176027,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:176175986..176176027,-
|short_description=p3@RFWD2
|description=CAGE_peak_3_at_RFWD2_5end
|association_with_transcript=-159bp_to_ENST00000367667_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64326 | |EntrezGene=64326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17440 | |HGNC=17440 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_ENST00000367667_5end | |||
|cluster_id=chr1:176175986..176176027,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_RFWD2_5end | |||
|id=chr1:176175986..176176027,- | |||
|ontology_enrichment_celltype=CL:0000037!3.64e-55!172;CL:0000566!3.64e-55!172;CL:0002032!6.59e-52!165;CL:0000837!6.59e-52!165;CL:0000988!5.54e-51!182;CL:0000738!1.08e-46!140;CL:0000763!1.56e-45!112;CL:0000049!1.56e-45!112;CL:0000766!9.94e-38!76;CL:0002031!7.58e-37!124;CL:0002087!1.22e-36!119;CL:0000557!4.64e-34!71;CL:0002009!1.12e-31!65;CL:0000839!1.26e-31!70;CL:0002194!8.91e-31!63;CL:0000576!8.91e-31!63;CL:0000040!8.91e-31!63;CL:0000559!8.91e-31!63;CL:0002057!1.18e-25!42;CL:0000860!2.91e-23!45;CL:0000134!1.96e-15!358;CL:0002320!7.58e-15!365;CL:0000219!1.35e-12!390;CL:0000048!9.14e-12!430;CL:0000034!2.64e-11!444;CL:0000723!4.48e-11!436;CL:0000542!2.60e-07!53;CL:0000051!2.60e-07!53;CL:0000838!5.44e-07!52;CL:0002393!7.67e-07!9;CL:0002397!7.67e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.04e-22;33!CL:0002057;3.04e-22;33!CL:0000576;5.18e-22;48!CL:0000473;7.23e-22;39!CL:0000234;7.23e-22;39!CL:0000766;4.92e-20;69!CL:0000763;4.13e-16;100!CL:0002087;3.97e-12;104!CL:0000738;1.02e-11;136!CL:0000988;4.69e-11;177!CL:0000094;1.43e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.31e-63,168;CL:0002032,1.02e-59,161;CL:0000837,1.02e-59,161;CL:0000988,1.20e-59,177;CL:0000763,1.51e-55,108;CL:0000049,1.51e-55,108;CL:0000738,6.30e-55,136;CL:0000766,2.83e-48,72;CL:0000557,9.47e-44,67;CL:0002087,8.07e-43,115;CL:0002031,3.96e-42,120;CL:0002009,6.46e-41,61;CL:0002194,7.73e-40,59;CL:0000576,7.73e-40,59;CL:0000040,7.73e-40,59;CL:0000559,7.73e-40,59;CL:0000839,1.74e-39,66;CL:0000473,1.32e-34,48;CL:0000234,1.32e-34,48;CL:0000860,1.03e-30,42;CL:0002057,1.03e-30,42;CL:0000134,4.67e-17,354;CL:0002320,7.91e-16,361;CL:0000219,3.26e-14,386;CL:0000048,2.83e-12,427;CL:0000034,5.84e-12,441;CL:0000723,7.49e-12,433;CL:0002393,5.95e-08,9;CL:0002397,5.95e-08,9;CL:0000094,1.67e-07,8;CL:0000542,7.38e-07,53;CL:0000051,7.38e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-22;42!CL:0000049;2.30e-15;108 | |||
|ontology_enrichment_disease=DOID:2531!3.97e-11!51;DOID:0060083!3.97e-11!51;DOID:1240!5.57e-09!39;DOID:8692!1.72e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.94e-09;31!DOID:1240;1.12e-07;39!DOID:2531;5.74e-07;51!DOID:0060083;5.74e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.33e-11,51;DOID:0060083,2.33e-11,51;DOID:8692,1.38e-09,31;DOID:1240,1.60e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-38!102;UBERON:0003061!3.91e-38!102;UBERON:0002193!1.57e-37!112;UBERON:0002371!1.94e-28!80;UBERON:0001474!6.71e-25!86;UBERON:0004765!5.32e-21!101;UBERON:0001434!5.32e-21!101;UBERON:0002405!2.70e-19!115;UBERON:0003081!2.84e-13!216;UBERON:0002384!4.63e-13!375;UBERON:0002204!2.67e-09!167;UBERON:0000178!3.54e-08!15;UBERON:0000179!3.54e-08!15;UBERON:0000463!3.54e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-09;15!UBERON:0000179;3.36e-09;15!UBERON:0000463;3.36e-09;15!UBERON:0002390;3.08e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.95e-50,98;UBERON:0003061,6.95e-50,98;UBERON:0002193,2.36e-49,108;UBERON:0002405,1.05e-40,93;UBERON:0002371,1.39e-38,76;UBERON:0001474,3.36e-34,82;UBERON:0004765,3.04e-29,90;UBERON:0001434,1.35e-25,100;UBERON:0003081,5.94e-20,203;UBERON:0002384,1.38e-14,371;UBERON:0002204,2.28e-11,167;UBERON:0000178,5.43e-09,15;UBERON:0000179,5.43e-09,15;UBERON:0000463,5.43e-09,15;UBERON:0000926,2.65e-08,315;UBERON:0004120,2.65e-08,315;UBERON:0006603,2.65e-08,315 | |||
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| ||
|short_description=p3@RFWD2 | |||
}} | }} |
Latest revision as of 20:01, 18 September 2015
Short description: | p3@RFWD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFWD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -159bp_to_ENST00000367667_5end |
EntrezGene: | RFWD2 |
HGNC: | 17440 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.95e-50 | 98 |
blood island | 6.95e-50 | 98 |
hemolymphoid system | 2.36e-49 | 108 |
immune system | 1.05e-40 | 93 |
bone marrow | 1.39e-38 | 76 |
bone element | 3.36e-34 | 82 |
skeletal element | 3.04e-29 | 90 |
skeletal system | 1.35e-25 | 100 |
lateral plate mesoderm | 5.94e-20 | 203 |
connective tissue | 1.38e-14 | 371 |
musculoskeletal system | 2.28e-11 | 167 |
blood | 5.43e-09 | 15 |
haemolymphatic fluid | 5.43e-09 | 15 |
organism substance | 5.43e-09 | 15 |
mesoderm | 2.65e-08 | 315 |
mesoderm-derived structure | 2.65e-08 | 315 |
presumptive mesoderm | 2.65e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.33e-11 | 51 |
immune system cancer | 2.33e-11 | 51 |
myeloid leukemia | 1.38e-09 | 31 |
leukemia | 1.60e-09 | 39 |