FFCP PHASE1:Hg19::chr5:77844922..77844931,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000515007_5end | |association_with_transcript=42bp_to_ENST00000515007_5end | ||
|cluster_id=chr5:77844922..77844931,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_21_at_LHFPL2_5end | |description=CAGE_peak_21_at_LHFPL2_5end | ||
|id=chr5:77844922..77844931,- | |id=chr5:77844922..77844931,- | ||
|ontology_enrichment_celltype=CL:0002057!2.63e-43!42;CL:0000860!4.50e-40!45;CL:0002194!6.57e-39!63;CL:0000576!6.57e-39!63;CL:0000040!6.57e-39!63;CL:0000559!6.57e-39!63;CL:0002009!1.52e-37!65;CL:0000839!1.80e-34!70;CL:0000557!6.60e-34!71;CL:0000766!2.61e-31!76;CL:0000763!3.34e-21!112;CL:0000049!3.34e-21!112;CL:0002087!1.34e-19!119;CL:0002031!1.45e-18!124;CL:0000738!9.27e-16!140;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000037!7.23e-13!172;CL:0000566!7.23e-13!172;CL:0000988!8.01e-12!182;CL:0000840!1.51e-07!5;CL:0001029!1.51e-07!5 | |ontology_enrichment_celltype=CL:0002057!2.63e-43!42;CL:0000860!4.50e-40!45;CL:0002194!6.57e-39!63;CL:0000576!6.57e-39!63;CL:0000040!6.57e-39!63;CL:0000559!6.57e-39!63;CL:0002009!1.52e-37!65;CL:0000839!1.80e-34!70;CL:0000557!6.60e-34!71;CL:0000766!2.61e-31!76;CL:0000763!3.34e-21!112;CL:0000049!3.34e-21!112;CL:0002087!1.34e-19!119;CL:0002031!1.45e-18!124;CL:0000738!9.27e-16!140;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000037!7.23e-13!172;CL:0000566!7.23e-13!172;CL:0000988!8.01e-12!182;CL:0000840!1.51e-07!5;CL:0001029!1.51e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.18e-42;33!CL:0002057;8.18e-42;33!CL:0000473;5.70e-29;39!CL:0000234;5.70e-29;39!CL:0000840;4.24e-23;5!CL:0000576;5.79e-23;48!CL:0000990;1.22e-15;8!CL:0000451;6.48e-13;10!CL:0000766;1.68e-09;69!CL:0000763;1.68e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.73e-42,59;CL:0000576,8.73e-42,59;CL:0000040,8.73e-42,59;CL:0000559,8.73e-42,59;CL:0002009,2.07e-40,61;CL:0000839,2.48e-37,66;CL:0000557,9.06e-37,67;CL:0000860,1.53e-35,42;CL:0002057,1.53e-35,42;CL:0000766,3.43e-34,72;CL:0000473,5.23e-31,48;CL:0000234,5.23e-31,48;CL:0000840,3.93e-23,5;CL:0001029,3.93e-23,5;CL:0000763,1.37e-22,108;CL:0000049,1.37e-22,108;CL:0002087,3.64e-21,115;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0000990,1.16e-15,8;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000451,6.21e-13,10 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-28;42!CL:0000049;8.71e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-29!80;UBERON:0001474!5.19e-27!86;UBERON:0004765!3.78e-22!101;UBERON:0001434!3.78e-22!101;UBERON:0002390!7.11e-22!102;UBERON:0003061!7.11e-22!102;UBERON:0002193!3.72e-21!112;UBERON:0002405!1.90e-20!115;UBERON:0002204!4.01e-11!167;UBERON:0001049!5.20e-08!57;UBERON:0005068!5.20e-08!57;UBERON:0006241!5.20e-08!57;UBERON:0007135!5.20e-08!57;UBERON:0001017!5.52e-08!82;UBERON:0005743!1.74e-07!86;UBERON:0003081!2.43e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.84e-29!80;UBERON:0001474!5.19e-27!86;UBERON:0004765!3.78e-22!101;UBERON:0001434!3.78e-22!101;UBERON:0002390!7.11e-22!102;UBERON:0003061!7.11e-22!102;UBERON:0002193!3.72e-21!112;UBERON:0002405!1.90e-20!115;UBERON:0002204!4.01e-11!167;UBERON:0001049!5.20e-08!57;UBERON:0005068!5.20e-08!57;UBERON:0006241!5.20e-08!57;UBERON:0007135!5.20e-08!57;UBERON:0001017!5.52e-08!82;UBERON:0005743!1.74e-07!86;UBERON:0003081!2.43e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-32,76;UBERON:0001474,5.79e-30,82;UBERON:0004765,3.01e-27,90;UBERON:0002405,2.39e-26,93;UBERON:0002390,5.72e-25,98;UBERON:0003061,5.72e-25,98;UBERON:0001434,1.87e-24,100;UBERON:0002193,1.37e-22,108;UBERON:0002204,2.75e-14,167;UBERON:0003081,1.45e-11,203;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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| ||
|short_description=p21@LHFPL2 | |short_description=p21@LHFPL2 | ||
}} | }} |
Latest revision as of 20:35, 18 September 2015
Short description: | p21@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LHFPL2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 42bp_to_ENST00000515007_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.73e-42 | 59 |
monocyte | 8.73e-42 | 59 |
monoblast | 8.73e-42 | 59 |
promonocyte | 8.73e-42 | 59 |
macrophage dendritic cell progenitor | 2.07e-40 | 61 |
myeloid lineage restricted progenitor cell | 2.48e-37 | 66 |
granulocyte monocyte progenitor cell | 9.06e-37 | 67 |
classical monocyte | 1.53e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-35 | 42 |
myeloid leukocyte | 3.43e-34 | 72 |
defensive cell | 5.23e-31 | 48 |
phagocyte | 5.23e-31 | 48 |
immature conventional dendritic cell | 3.93e-23 | 5 |
common dendritic progenitor | 3.93e-23 | 5 |
myeloid cell | 1.37e-22 | 108 |
common myeloid progenitor | 1.37e-22 | 108 |
nongranular leukocyte | 3.64e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
conventional dendritic cell | 1.16e-15 | 8 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
dendritic cell | 6.21e-13 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-32 | 76 |
bone element | 5.79e-30 | 82 |
skeletal element | 3.01e-27 | 90 |
immune system | 2.39e-26 | 93 |
hematopoietic system | 5.72e-25 | 98 |
blood island | 5.72e-25 | 98 |
skeletal system | 1.87e-24 | 100 |
hemolymphoid system | 1.37e-22 | 108 |
musculoskeletal system | 2.75e-14 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |