FFCP PHASE1:Hg19::chr17:17421463..17421482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000484838_5end | |association_with_transcript=-7bp_to_ENST00000484838_5end | ||
|cluster_id=chr17:17421463..17421482,- | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_5_at_PEMT_5end | |description=CAGE_peak_5_at_PEMT_5end | ||
|id=chr17:17421463..17421482,- | |id=chr17:17421463..17421482,- | ||
|ontology_enrichment_celltype=CL:1000507!5.36e-08!12;CL:1000494!5.36e-08!12 | |ontology_enrichment_celltype=CL:1000507!5.36e-08!12;CL:1000494!5.36e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.12e-08;3!CL:1000428;1.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.19e-08,3;CL:1000428,1.19e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.33e-12;2!UBERON:0010227;5.18e-07;1!UBERON:0005754;5.18e-07;1!UBERON:0004140;5.18e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;3.28e-18;3!UBERON:0004054;3.28e-18;3!UBERON:0003296;4.54e-14;4!UBERON:0010133;4.54e-14;4!UBERON:0005904;8.44e-14;4!UBERON:0002370;1.61e-13;2!UBERON:0005058;1.61e-13;2!UBERON:0009113;1.61e-13;2!UBERON:0003135;2.76e-13;11!UBERON:0000007;2.79e-13;2!UBERON:0002108;4.55e-11;4!UBERON:0000412;1.12e-08;3!UBERON:0001992;1.12e-08;3!UBERON:0001894;3.03e-08;7!UBERON:0000160;6.79e-08;17!UBERON:0001000;1.40e-07;1!UBERON:0005352;1.40e-07;1!UBERON:0000473;3.68e-07;8!UBERON:0002079;5.18e-07;1!UBERON:0000998;5.18e-07;1!UBERON:0001301;5.18e-07;1!UBERON:0006868;5.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.39e-18,3;UBERON:0004054,3.39e-18,3;UBERON:0003296,5.55e-14,4;UBERON:0010133,5.55e-14,4;UBERON:0005904,8.63e-14,4;UBERON:0003135,2.73e-13,11;UBERON:0000007,2.88e-13,2;UBERON:0002108,3.04e-11,4;UBERON:0000412,1.19e-08,3;UBERON:0001992,1.19e-08,3;UBERON:0001894,3.39e-08,7;UBERON:0006222,3.39e-08,7;UBERON:0000160,5.74e-08,17;UBERON:0001000,1.36e-07,1;UBERON:0005352,1.36e-07,1;UBERON:0000473,3.31e-07,8;UBERON:0002370,3.63e-07,4;UBERON:0005058,3.63e-07,4;UBERON:0009113,3.63e-07,4;UBERON:0003295,3.63e-07,4;UBERON:0005562,3.63e-07,4;UBERON:0000998,4.08e-07,1;UBERON:0006868,4.08e-07,1;UBERON:0002079,4.89e-07,1;UBERON:0001301,6.97e-07,1 | |||
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| ||
|short_description=p5@PEMT | |short_description=p5@PEMT | ||
}} | }} |
Latest revision as of 21:36, 18 September 2015
Short description: | p5@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PEMT_5end |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | -7bp_to_ENST00000484838_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.19e-08 | 3 |
stem cell of epidermis | 1.19e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.39e-18 | 3 |
internal male genitalia | 3.39e-18 | 3 |
gland of diencephalon | 5.55e-14 | 4 |
neuroendocrine gland | 5.55e-14 | 4 |
duct of male reproductive system | 8.63e-14 | 4 |
male reproductive organ | 2.73e-13 | 11 |
pituitary gland | 2.88e-13 | 2 |
small intestine | 3.04e-11 | 4 |
dermal papilla | 1.19e-08 | 3 |
papillary layer of dermis | 1.19e-08 | 3 |
diencephalon | 3.39e-08 | 7 |
future diencephalon | 3.39e-08 | 7 |
intestine | 5.74e-08 | 17 |
vas deferens | 1.36e-07 | 1 |
spermatic cord | 1.36e-07 | 1 |
testis | 3.31e-07 | 8 |
thymus | 3.63e-07 | 4 |
hemolymphoid system gland | 3.63e-07 | 4 |
thymic region | 3.63e-07 | 4 |
pharyngeal gland | 3.63e-07 | 4 |
thymus primordium | 3.63e-07 | 4 |
seminal vesicle | 4.08e-07 | 1 |
seminal fluid secreting gland | 4.08e-07 | 1 |
left cardiac atrium | 4.89e-07 | 1 |
epididymis | 6.97e-07 | 1 |