FFCP PHASE1:Hg19::chr4:80993855..80993906,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:80993855..80993906,- to FFCP PHASE1:Hg19::chr4:80993855..80993906,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118429 | |EntrezGene=118429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21732 | |HGNC=21732 | ||
|TSSclassifier=strong | |||
|UniProt=P58335 | |UniProt=P58335 | ||
|association_with_transcript=-1bp_to_ENST00000346652_5end | |||
|cluster_id=chr4:80993855..80993906,- | |||
|coexpression_cluster_id=C4429 | |||
|description=CAGE_peak_3_at_ANTXR2_5end | |||
|id=chr4:80993855..80993906,- | |||
|ontology_enrichment_celltype=CL:0000055!6.91e-18!180;CL:0000222!9.99e-14!119;CL:0000680!2.91e-12!57;CL:0000056!2.91e-12!57;CL:0000355!2.91e-12!57;CL:0000187!9.66e-12!54;CL:0000057!1.88e-11!75;CL:0000393!2.68e-11!60;CL:0000211!2.68e-11!60;CL:0000723!1.39e-10!436;CL:0000359!1.79e-10!32;CL:0000192!2.05e-10!42;CL:0000514!2.05e-10!42;CL:0000183!2.11e-10!59;CL:0000048!3.32e-10!430;CL:0000034!7.23e-10!444;CL:0002371!1.31e-08!591;CL:0000071!5.15e-08!18;CL:0002546!5.15e-08!18;CL:0002139!5.81e-08!24;CL:0000136!4.04e-07!15;CL:0000144!4.87e-07!625;CL:0000115!9.91e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.75e-10;32!CL:0000071;3.73e-08;18!CL:0000192;7.07e-08;43!CL:0002139;8.02e-08;24!CL:0000136;1.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.64e-14,121;CL:0000680,8.84e-13,58;CL:0000056,8.84e-13,58;CL:0000355,8.84e-13,58;CL:0000187,3.02e-12,55;CL:0000057,6.10e-12,76;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000723,3.56e-11,433;CL:0000192,6.78e-11,43;CL:0000514,6.78e-11,43;CL:0000048,8.77e-11,427;CL:0000359,1.20e-10,32;CL:0000034,2.47e-10,441;CL:0000071,3.85e-08,18;CL:0002546,3.85e-08,18;CL:0002139,7.01e-08,24;CL:0000136,3.15e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;3.73e-08;18!CL:0000514;7.07e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.62e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.79e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.09e-24!84;UBERON:0001981!8.81e-21!60;UBERON:0007500!8.81e-21!60;UBERON:0004537!8.81e-21!60;UBERON:0006965!8.81e-21!60;UBERON:0000055!1.38e-19!69;UBERON:0002049!2.45e-19!79;UBERON:0007798!2.45e-19!79;UBERON:0004535!3.75e-17!110;UBERON:0001009!4.74e-17!113;UBERON:0003914!1.21e-16!118;UBERON:0001637!7.43e-16!42;UBERON:0003509!7.43e-16!42;UBERON:0004572!7.43e-16!42;UBERON:0000490!1.15e-13!138;UBERON:0004573!1.24e-12!33;UBERON:0004571!1.24e-12!33;UBERON:0002385!2.04e-12!63;UBERON:0001015!2.04e-12!63;UBERON:0000383!2.04e-12!63;UBERON:0000468!9.45e-12!659;UBERON:0001134!1.09e-11!61;UBERON:0002036!1.09e-11!61;UBERON:0003082!1.09e-11!61;UBERON:0000486!1.12e-11!82;UBERON:0000914!1.13e-11!83;UBERON:0002329!1.13e-11!83;UBERON:0003077!1.13e-11!83;UBERON:0003059!1.13e-11!83;UBERON:0007282!1.13e-11!83;UBERON:0009618!1.13e-11!83;UBERON:0007285!1.13e-11!83;UBERON:0004290!2.29e-11!70;UBERON:0000467!4.23e-11!625;UBERON:0000480!8.55e-11!626;UBERON:0005256!1.94e-10!143;UBERON:0003081!2.61e-10!216;UBERON:0002204!2.83e-09!167;UBERON:0000947!4.30e-09!21;UBERON:0010191!4.30e-09!21;UBERON:0000926!1.69e-08!448;UBERON:0004120!1.69e-08!448;UBERON:0006603!1.69e-08!448;UBERON:0001986!5.15e-08!18;UBERON:0004638!5.15e-08!18;UBERON:0004852!5.15e-08!18;UBERON:0002050!2.35e-07!605;UBERON:0005423!2.35e-07!605;UBERON:0000948!3.68e-07!24;UBERON:0005498!3.68e-07!24;UBERON:0004140!3.68e-07!24;UBERON:0009881!3.68e-07!24;UBERON:0004141!3.68e-07!24;UBERON:0003084!3.68e-07!24;UBERON:0007005!3.68e-07!24;UBERON:0004139!3.68e-07!24;UBERON:0004291!3.68e-07!24;UBERON:0000923!3.75e-07!604;UBERON:0005291!3.75e-07!604;UBERON:0006598!3.75e-07!604;UBERON:0002532!3.75e-07!604;UBERON:0000922!5.58e-07!612;UBERON:0002100!7.31e-07!216;UBERON:0007100!7.60e-07!27;UBERON:0000479!8.75e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-12;42!UBERON:0003509;1.88e-12;42!UBERON:0004572;1.88e-12;42!UBERON:0004573;3.65e-12;33!UBERON:0004571;3.65e-12;33!UBERON:0007500;2.17e-11;56!UBERON:0001981;2.17e-11;56!UBERON:0004537;2.17e-11;56!UBERON:0000055;8.89e-10;65!UBERON:0000947;2.51e-09;21!UBERON:0010191;2.51e-09;21!UBERON:0004638;3.73e-08;18!UBERON:0001986;3.73e-08;18!UBERON:0004852;3.73e-08;18!UBERON:0002049;7.96e-08;75!UBERON:0007798;7.96e-08;75!UBERON:0002385;7.82e-07;31!UBERON:0001015;7.82e-07;31!UBERON:0000383;7.82e-07;31 | |||
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| ||
|short_description=p3@ANTXR2 | |||
}} | }} |
Latest revision as of 21:46, 18 September 2015
Short description: | p3@ANTXR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ANTXR2_5end |
Coexpression cluster: | C4429_Adipocyte_Preadipocyte_neuroblastoma_Smooth_Fibroblast_Mesenchymal_mesenchymal |
Association with transcript: | -1bp_to_ENST00000346652_5end |
EntrezGene: | ANTXR2 |
HGNC: | 21732 |
UniProt: | P58335 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.64e-14 | 121 |
muscle precursor cell | 8.84e-13 | 58 |
myoblast | 8.84e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.84e-13 | 58 |
muscle cell | 3.02e-12 | 55 |
fibroblast | 6.10e-12 | 76 |
electrically responsive cell | 1.21e-11 | 61 |
electrically active cell | 1.21e-11 | 61 |
somatic stem cell | 3.56e-11 | 433 |
smooth muscle cell | 6.78e-11 | 43 |
smooth muscle myoblast | 6.78e-11 | 43 |
multi fate stem cell | 8.77e-11 | 427 |
vascular associated smooth muscle cell | 1.20e-10 | 32 |
stem cell | 2.47e-10 | 441 |
blood vessel endothelial cell | 3.85e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.85e-08 | 18 |
endothelial cell of vascular tree | 7.01e-08 | 24 |
fat cell | 3.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.14e-07 | 14 |