FFCP PHASE1:Hg19::chr15:72102881..72102925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10002 | |EntrezGene=10002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=7974 | |HGNC=7974 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZGU0,Q9Y5X4,F1D8Q9 | |UniProt=B6ZGU0,Q9Y5X4,F1D8Q9 | ||
|association_with_transcript=0bp_to_ENST00000398840,NM_014249,NM_016346,uc002ath.1,uc002ati.2_5end | |association_with_transcript=0bp_to_ENST00000398840,NM_014249,NM_016346,uc002ath.1,uc002ati.2_5end | ||
|cluster_id=chr15:72102881..72102925,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_NR2E3_5end | |description=CAGE_peak_1_at_NR2E3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000064!4.94e-21!3;CL:0005012!4.94e-21!3;CL:0000067!4.94e-21!3;CL:0002304!4.94e-21!3 | |ontology_enrichment_celltype=CL:0000064!4.94e-21!3;CL:0005012!4.94e-21!3;CL:0000067!4.94e-21!3;CL:0002304!4.94e-21!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.68e-53;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.68e-53;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@NR2E3 | |short_description=p1@NR2E3 | ||
}} | }} |
Latest revision as of 21:49, 18 September 2015
Short description: | p1@NR2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR2E3_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000398840, NM_014249, NM_016346, uc002ath.1, uc002ati.2_5end |
EntrezGene: | NR2E3 |
HGNC: | 7974 |
UniProt: | B6ZGU0Q9Y5X4F1D8Q9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |