FFCP PHASE1:Hg19::chr12:52681922..52681934,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52681922..52681934,- to FFCP PHASE1:Hg19::chr12:52681922..52681934,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3887 | |EntrezGene=3887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6458 | |HGNC=6458 | ||
|TSSclassifier=strong | |||
|UniProt=Q14533 | |UniProt=Q14533 | ||
|association_with_transcript=0bp_to_X80197_5end | |||
|cluster_id=chr12:52681922..52681934,- | |||
|description=CAGE_peak_1_at_KRT81_5end | |||
|id=chr12:52681922..52681934,- | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-17!254;CL:1000497!4.97e-10!18;CL:0002518!4.97e-10!18;CL:1000507!6.18e-10!12;CL:1000494!6.18e-10!12;CL:1000449!7.15e-10!16;CL:0002076!4.52e-07!43;CL:0002681!5.51e-07!13;CL:0002584!5.51e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.07e-15;10!CL:1000494;4.07e-15;10!CL:1000497;6.37e-13;17!CL:0002518;6.37e-13;17!CL:1000449;3.33e-12;15!CL:0000239;1.97e-08;3!CL:1000615;1.97e-08;3!CL:0002306;1.97e-08;3!CL:0000322;6.43e-08;3!CL:0002681;1.82e-07;12!CL:0002584;1.82e-07;12!CL:0000075;2.21e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.44e-15,10;CL:1000494,3.44e-15,10;CL:1000497,5.50e-13,17;CL:0002518,5.50e-13,17;CL:0000066,5.54e-13,253;CL:1000449,2.95e-12,15;CL:0000239,2.09e-08,3;CL:1000615,2.09e-08,3;CL:0002306,2.09e-08,3;CL:0000322,6.59e-08,3;CL:0002681,1.87e-07,12;CL:0002584,1.87e-07,12;CL:0000075,2.23e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.92e-08!106;DOID:0050687!2.25e-08!143;DOID:162!2.88e-08!235;DOID:14566!9.83e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.40e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000058!2.39e-11!26;UBERON:0009773!6.18e-10!12;UBERON:0001231!6.18e-10!12;UBERON:0004810!6.18e-10!12;UBERON:0004211!7.15e-10!16;UBERON:0001285!7.15e-10!16;UBERON:0007684!7.15e-10!16;UBERON:0003220!7.15e-10!16;UBERON:0004208!7.15e-10!16;UBERON:0003064!8.42e-10!37;UBERON:0006554!3.65e-09!44;UBERON:0006555!4.39e-09!17;UBERON:0005103!4.39e-09!17;UBERON:0000083!4.39e-09!17;UBERON:0009201!4.39e-09!17;UBERON:0004819!4.39e-09!17;UBERON:0006553!4.39e-09!17;UBERON:0003074!4.39e-09!17;UBERON:0003060!4.39e-09!17;UBERON:0001008!8.20e-09!45;UBERON:0000080!2.18e-08!18;UBERON:0002120!2.18e-08!18;UBERON:0004875!2.18e-08!18;UBERON:0005721!2.18e-08!18;UBERON:0005754!2.18e-08!18;UBERON:0007297!2.18e-08!18;UBERON:0005153!9.85e-08!37;UBERON:0004876!3.26e-07!20;UBERON:0005911!4.46e-07!82;UBERON:0001225!5.51e-07!13;UBERON:0008987!5.51e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.07e-15;10!UBERON:0009773;4.07e-15;10!UBERON:0001231;4.07e-15;10!UBERON:0004810;4.07e-15;10!UBERON:0006555;3.33e-12;15!UBERON:0004819;3.33e-12;15!UBERON:0001285;3.33e-12;15!UBERON:0007684;3.33e-12;15!UBERON:0002294;3.60e-09;7!UBERON:0001173;3.60e-09;7!UBERON:0002113;1.65e-08;24!UBERON:0011143;1.65e-08;24!UBERON:0006853;1.97e-08;3!UBERON:0007685;1.97e-08;3!UBERON:0004134;1.97e-08;3!UBERON:0004821;6.43e-08;3!UBERON:0007499;6.43e-08;3!UBERON:0003215;6.43e-08;3!UBERON:0010368;6.43e-08;3!UBERON:0009911;6.43e-08;3!UBERON:0002299;6.43e-08;3!UBERON:0006524;6.43e-08;3!UBERON:0008874;6.43e-08;3!UBERON:0002169;6.43e-08;3!UBERON:0004894;6.43e-08;3!UBERON:0001225;1.82e-07;12!UBERON:0008987;1.82e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.44e-15,10;UBERON:0004211,2.95e-12,15;UBERON:0009773,2.95e-12,15;UBERON:0001231,2.95e-12,15;UBERON:0001285,2.95e-12,15;UBERON:0007684,2.95e-12,15;UBERON:0004208,2.95e-12,15;UBERON:0006555,2.27e-11,16;UBERON:0004819,2.27e-11,16;UBERON:0005153,1.36e-08,37;UBERON:0006554,1.71e-08,47;UBERON:0006853,2.09e-08,3;UBERON:0007685,2.09e-08,3;UBERON:0004134,2.09e-08,3;UBERON:0001008,3.06e-08,48;UBERON:0004821,6.59e-08,3;UBERON:0003215,6.59e-08,3;UBERON:0010368,6.59e-08,3;UBERON:0009911,6.59e-08,3;UBERON:0002299,6.59e-08,3;UBERON:0006524,6.59e-08,3;UBERON:0008874,6.59e-08,3;UBERON:0002169,6.59e-08,3;UBERON:0004894,6.59e-08,3;UBERON:0002113,9.96e-08,26;UBERON:0003918,9.96e-08,26;UBERON:0011143,9.96e-08,26;UBERON:0005095,9.96e-08,26;UBERON:0007687,9.96e-08,26;UBERON:0009569,1.06e-07,112;UBERON:0001225,1.87e-07,12;UBERON:0008987,1.87e-07,12;UBERON:0002294,4.96e-07,9;UBERON:0001173,4.96e-07,9;UBERON:0004912,4.96e-07,9;UBERON:0002100,5.09e-07,199;UBERON:0005911,6.37e-07,82;UBERON:0005177,8.62e-07,101 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,2.7030733015166,36.2856607345662,0,0,0,0,0,0,0,0,0.246242116153576,0,1.25381888591235,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47994114143309,1.65810010671509,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0.0945348171640679,4.43458794925128,0.87834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,5.32190474002959,0.24406205754817,0,0,0,0,0,0,0,1.09921046358244,0,0,3.48875241714027,0,0,0,0,0.354668382198357,1.12135520028461,0,327.327836749571,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,1.8034837803194,0.37223371266318,3.71307930930786,6.33340533547791,0,0,0,0,0,4.40857540007268,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,63.8552266871308,6.97521452433509,14.1851591291128,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,7.23906533337896,0.205476322550383,1.07436577943937,8.6305560875016,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,13.4047052778844,0.35142424497814,0,0,25.8682678231262,0,4.05612170791747,0,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0.248107807818777,3.37616341233737,1.96462066103151,0,0,0,0,0,0,0,0,0,0.120859449591622,54.7382663927968,15.1933631744229,0.34444334449382,0,0.131124414959424,263.951773550836,164.427744717926,1.56869953835371,2.92278449306521,5.38313307353666,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,4.33289664176565,6.64860807142979,97.3855183041476,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12549761487054,0.23874448473769,0,0,0,0,0,0,8.02276550886375,0,0,0,0.102268682502155,0,0,84.0269083227506,136.235113928139,0,0,0,0,0,0,0,0,0.524759999977174,0,0.1137934482855,13.4754434655166,2.12748913591143,0,0,0,0,0,0,0,0,0,74.7317859740272,0.278847488557207,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0.416024019039416,0,2.84177952501695,78.0050490960407,0,0,0,0,0,0,0,0.225980740780532,125.804486825717,1.19228767021794,0,4.88878456837007,34.7087691689141,0,0.19980960958213,0,0,0,0.14405479798815,0,0,1.08723364858891,2.510468311496,16.1157183865388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.508039992394707,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,3.40645944732405,0,0,0,0,0,0,0,0,0,0,6.45878921664716,0,0,0,0,53.8923539335638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24949060701477,0,0,213.386098466242,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0,0.621748802331122,0,0,0,0,0,0,0,0,0,0,0.909243296012797,0,0,0,1.20008329398946,0,0,0,0,0,0.782982875895635,14.0557673817609,0.463044948647668,0,0.537266523244462,0.926404341482917,0.219284049578707,4.41722864864703,0.192914038270915,0,0,0.690860683462397,0,0,0,0,0,7.8626363723139,0,0.211312123358627,0,0,0,1.13503190713367,0,73.01710302955,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.4979621109441,0,0,0.577628330751691,0.762764190934334,0,0,0,0.40341013740704,0,0,0,2.21784129325568,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,2.04015451374069,0,8.23142445299609,0,0,19.1474022232028,68.0736179579463,0.078493092850514,0,0,0,2.80705868584208,0,0,0,0,0.173858272302579,0,1.45051314914126,0,0,0,0,0,0,1.60374807980835,1.5510319283216,4.77769469488717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0.651226148887796,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@KRT81 | |||
}} | }} |
Latest revision as of 22:22, 18 September 2015
Short description: | p1@KRT81 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT81_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_X80197_5end |
EntrezGene: | KRT81 |
HGNC: | 6458 |
UniProt: | Q14533 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.44e-15 | 10 |
nephron tubule epithelial cell | 3.44e-15 | 10 |
kidney cell | 5.50e-13 | 17 |
kidney epithelial cell | 5.50e-13 | 17 |
epithelial cell | 5.54e-13 | 253 |
epithelial cell of nephron | 2.95e-12 | 15 |
brush border epithelial cell | 2.09e-08 | 3 |
kidney cortex tubule cell | 2.09e-08 | 3 |
epithelial cell of proximal tubule | 2.09e-08 | 3 |
pneumocyte | 6.59e-08 | 3 |
kidney cortical cell | 1.87e-07 | 12 |
renal cortical epithelial cell | 1.87e-07 | 12 |
columnar/cuboidal epithelial cell | 2.23e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.44e-15 | 10 |
nephron epithelium | 2.95e-12 | 15 |
renal tubule | 2.95e-12 | 15 |
nephron tubule | 2.95e-12 | 15 |
nephron | 2.95e-12 | 15 |
uriniferous tubule | 2.95e-12 | 15 |
nephrogenic mesenchyme | 2.95e-12 | 15 |
excretory tube | 2.27e-11 | 16 |
kidney epithelium | 2.27e-11 | 16 |
epithelial bud | 1.36e-08 | 37 |
urinary system structure | 1.71e-08 | 47 |
renal cortex tubule | 2.09e-08 | 3 |
region of nephron tubule | 2.09e-08 | 3 |
proximal tubule | 2.09e-08 | 3 |
renal system | 3.06e-08 | 48 |
pulmonary alveolus epithelium | 6.59e-08 | 3 |
alveolus | 6.59e-08 | 3 |
pulmonary lobule | 6.59e-08 | 3 |
lobule | 6.59e-08 | 3 |
alveolus of lung | 6.59e-08 | 3 |
alveolar system | 6.59e-08 | 3 |
pulmonary acinus | 6.59e-08 | 3 |
alveolar sac | 6.59e-08 | 3 |
alveolar wall | 6.59e-08 | 3 |
kidney | 9.96e-08 | 26 |
kidney mesenchyme | 9.96e-08 | 26 |
upper urinary tract | 9.96e-08 | 26 |
kidney rudiment | 9.96e-08 | 26 |
kidney field | 9.96e-08 | 26 |
subdivision of trunk | 1.06e-07 | 112 |
cortex of kidney | 1.87e-07 | 12 |
renal parenchyma | 1.87e-07 | 12 |
biliary system | 4.96e-07 | 9 |
biliary tree | 4.96e-07 | 9 |
biliary bud | 4.96e-07 | 9 |
trunk | 5.09e-07 | 199 |
endo-epithelium | 6.37e-07 | 82 |
trunk region element | 8.62e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.40e-07 | 143 |