FFCP PHASE1:Hg19::chr21:47706114..47706137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8888 | |EntrezGene=8888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6946 | |HGNC=6946 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL56 | |UniProt=C9JL56 | ||
|association_with_transcript=-16bp_to_ENST00000426537_5end | |association_with_transcript=-16bp_to_ENST00000426537_5end | ||
|cluster_id=chr21:47706114..47706137,- | |||
|description=CAGE_peak_3_at_MCM3AP_5end | |description=CAGE_peak_3_at_MCM3AP_5end | ||
|id=chr21:47706114..47706137,- | |id=chr21:47706114..47706137,- | ||
|ontology_enrichment_celltype=CL:0000055!5.15e-08!180 | |ontology_enrichment_celltype=CL:0000055!5.15e-08!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.67e-16!94;UBERON:0001016!8.67e-16!94;UBERON:0005743!1.56e-13!86;UBERON:0001017!2.34e-13!82;UBERON:0000955!1.43e-11!69;UBERON:0006238!1.43e-11!69;UBERON:0000924!3.77e-11!173;UBERON:0006601!3.77e-11!173;UBERON:0004121!6.08e-11!169;UBERON:0002616!3.20e-09!59;UBERON:0001049!4.65e-09!57;UBERON:0005068!4.65e-09!57;UBERON:0006241!4.65e-09!57;UBERON:0007135!4.65e-09!57;UBERON:0002346!6.08e-09!90;UBERON:0003075!8.46e-09!86;UBERON:0007284!8.46e-09!86;UBERON:0000033!3.60e-08!123;UBERON:0000153!1.04e-07!129;UBERON:0007811!1.04e-07!129;UBERON:0001893!7.29e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!8.67e-16!94;UBERON:0001016!8.67e-16!94;UBERON:0005743!1.56e-13!86;UBERON:0001017!2.34e-13!82;UBERON:0000955!1.43e-11!69;UBERON:0006238!1.43e-11!69;UBERON:0000924!3.77e-11!173;UBERON:0006601!3.77e-11!173;UBERON:0004121!6.08e-11!169;UBERON:0002616!3.20e-09!59;UBERON:0001049!4.65e-09!57;UBERON:0005068!4.65e-09!57;UBERON:0006241!4.65e-09!57;UBERON:0007135!4.65e-09!57;UBERON:0002346!6.08e-09!90;UBERON:0003075!8.46e-09!86;UBERON:0007284!8.46e-09!86;UBERON:0000033!3.60e-08!123;UBERON:0000153!1.04e-07!129;UBERON:0007811!1.04e-07!129;UBERON:0001893!7.29e-07!34 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-15,89;UBERON:0001017,2.59e-13,81;UBERON:0000955,1.58e-11,68;UBERON:0006238,1.58e-11,68;UBERON:0004121,1.77e-10,171;UBERON:0000924,1.77e-10,171;UBERON:0006601,1.77e-10,171;UBERON:0000073,4.11e-09,53;UBERON:0002616,4.11e-09,53;UBERON:0010314,4.81e-09,132;UBERON:0001049,5.34e-09,56;UBERON:0005068,5.34e-09,56;UBERON:0006241,5.34e-09,56;UBERON:0007135,5.34e-09,56;UBERON:0002346,1.23e-08,86;UBERON:0003075,1.70e-08,82;UBERON:0007284,1.70e-08,82;UBERON:0011216,4.55e-08,223;UBERON:0010371,1.19e-07,104;UBERON:0001893,5.28e-07,34 | |||
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| ||
|short_description=p3@MCM3AP | |short_description=p3@MCM3AP | ||
}} | }} |
Latest revision as of 23:35, 18 September 2015
Short description: | p3@MCM3AP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MCM3AP_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000426537_5end |
EntrezGene: | MCM3AP |
HGNC: | 6946 |
UniProt: | C9JL56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.38e-15 | 89 |
central nervous system | 2.59e-13 | 81 |
brain | 1.58e-11 | 68 |
future brain | 1.58e-11 | 68 |
ectoderm-derived structure | 1.77e-10 | 171 |
ectoderm | 1.77e-10 | 171 |
presumptive ectoderm | 1.77e-10 | 171 |
regional part of nervous system | 4.11e-09 | 53 |
regional part of brain | 4.11e-09 | 53 |
structure with developmental contribution from neural crest | 4.81e-09 | 132 |
neural tube | 5.34e-09 | 56 |
neural rod | 5.34e-09 | 56 |
future spinal cord | 5.34e-09 | 56 |
neural keel | 5.34e-09 | 56 |
neurectoderm | 1.23e-08 | 86 |
neural plate | 1.70e-08 | 82 |
presumptive neural plate | 1.70e-08 | 82 |
organ system subdivision | 4.55e-08 | 223 |
ecto-epithelium | 1.19e-07 | 104 |
telencephalon | 5.28e-07 | 34 |