FFCP PHASE1:Hg19::chr1:6662919..6662936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9903 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29041 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJP4 | |||
|association_with_transcript=0bp_to_ENST00000377658,NM_014851,uc001anz.1,uc001aoa.2_5end | |||
|cluster_id=chr1:6662919..6662936,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_KLHL21_5end | |||
|id=chr1:6662919..6662936,- | |||
|ontology_enrichment_celltype=CL:0002057!5.76e-13!42;CL:0000860!9.98e-12!45;CL:0000766!1.54e-10!76;CL:0000557!8.48e-10!71;CL:0000839!2.27e-09!70;CL:0002009!2.41e-09!65;CL:0002194!9.30e-09!63;CL:0000576!9.30e-09!63;CL:0000040!9.30e-09!63;CL:0000559!9.30e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-15;33!CL:0002057;2.21e-15;33!CL:0000473;1.43e-10;39!CL:0000234;1.43e-10;39!CL:0000576;1.10e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.76e-13,42;CL:0002057,5.76e-13,42;CL:0000766,1.35e-11,72;CL:0000473,3.29e-11,48;CL:0000234,3.29e-11,48;CL:0000557,7.55e-11,67;CL:0002009,1.98e-10,61;CL:0000839,2.14e-10,66;CL:0002194,8.20e-10,59;CL:0000576,8.20e-10,59;CL:0000040,8.20e-10,59;CL:0000559,8.20e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.83e-11!448;UBERON:0004120!9.83e-11!448;UBERON:0006603!9.83e-11!448;UBERON:0003081!5.38e-10!216;UBERON:0002204!6.54e-10!167;UBERON:0000468!1.12e-09!659;UBERON:0002371!5.67e-09!80;UBERON:0000922!9.41e-09!612;UBERON:0000923!1.21e-08!604;UBERON:0005291!1.21e-08!604;UBERON:0006598!1.21e-08!604;UBERON:0002532!1.21e-08!604;UBERON:0002050!1.41e-08!605;UBERON:0005423!1.41e-08!605;UBERON:0001474!3.14e-08!86;UBERON:0000480!9.24e-08!626;UBERON:0000467!9.65e-08!625;UBERON:0002405!3.01e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.39e-14,315;UBERON:0004120,1.39e-14,315;UBERON:0006603,1.39e-14,315;UBERON:0003081,5.72e-11,203;UBERON:0002204,1.01e-10,167;UBERON:0002371,7.27e-10,76;UBERON:0001474,5.11e-09,82;UBERON:0000923,8.54e-09,560;UBERON:0010316,8.54e-09,560;UBERON:0005291,8.54e-09,560;UBERON:0006598,8.54e-09,560;UBERON:0010317,8.54e-09,560;UBERON:0002532,8.54e-09,560;UBERON:0002050,1.85e-08,564;UBERON:0005423,1.91e-08,581;UBERON:0004765,2.04e-08,90;UBERON:0000922,3.47e-08,592;UBERON:0002405,6.48e-08,93;UBERON:0002390,4.53e-07,98;UBERON:0003061,4.53e-07,98;UBERON:0001434,6.53e-07,100 | |||
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| |||
|short_description=p1@KLHL21 | |||
}} |
Latest revision as of 23:53, 18 September 2015
Short description: | p1@KLHL21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL21_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000377658, NM_014851, uc001anz.1, uc001aoa.2_5end |
EntrezGene: | KLHL21 |
HGNC: | 29041 |
UniProt: | Q9UJP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.76e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.76e-13 | 42 |
myeloid leukocyte | 1.35e-11 | 72 |
defensive cell | 3.29e-11 | 48 |
phagocyte | 3.29e-11 | 48 |
granulocyte monocyte progenitor cell | 7.55e-11 | 67 |
macrophage dendritic cell progenitor | 1.98e-10 | 61 |
myeloid lineage restricted progenitor cell | 2.14e-10 | 66 |
monopoietic cell | 8.20e-10 | 59 |
monocyte | 8.20e-10 | 59 |
monoblast | 8.20e-10 | 59 |
promonocyte | 8.20e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.39e-14 | 315 |
mesoderm-derived structure | 1.39e-14 | 315 |
presumptive mesoderm | 1.39e-14 | 315 |
lateral plate mesoderm | 5.72e-11 | 203 |
musculoskeletal system | 1.01e-10 | 167 |
bone marrow | 7.27e-10 | 76 |
bone element | 5.11e-09 | 82 |
germ layer | 8.54e-09 | 560 |
germ layer / neural crest | 8.54e-09 | 560 |
embryonic tissue | 8.54e-09 | 560 |
presumptive structure | 8.54e-09 | 560 |
germ layer / neural crest derived structure | 8.54e-09 | 560 |
epiblast (generic) | 8.54e-09 | 560 |
embryonic structure | 1.85e-08 | 564 |
developing anatomical structure | 1.91e-08 | 581 |
skeletal element | 2.04e-08 | 90 |
embryo | 3.47e-08 | 592 |
immune system | 6.48e-08 | 93 |
hematopoietic system | 4.53e-07 | 98 |
blood island | 4.53e-07 | 98 |
skeletal system | 6.53e-07 | 100 |