FFCP PHASE1:Hg19::chr8:71315585..71315605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7669 | |||
|TSSclassifier=strong | |||
|UniProt=Q569J4 | |||
|association_with_transcript=-97bp_to_BC092442_5end | |||
|cluster_id=chr8:71315585..71315605,- | |||
|description=CAGE_peak_8_at_NCOA2_5end | |||
|id=chr8:71315585..71315605,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;4.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.95e-12!41;UBERON:0001890!3.95e-12!41;UBERON:0006240!3.95e-12!41;UBERON:0003080!2.33e-11!42;UBERON:0001869!3.24e-11!32;UBERON:0007023!6.47e-11!115;UBERON:0001893!6.80e-11!34;UBERON:0002020!2.02e-10!34;UBERON:0003528!2.02e-10!34;UBERON:0002791!2.14e-10!33;UBERON:0002616!4.46e-10!59;UBERON:0000955!4.64e-10!69;UBERON:0006238!4.64e-10!69;UBERON:0001049!1.31e-09!57;UBERON:0005068!1.31e-09!57;UBERON:0006241!1.31e-09!57;UBERON:0007135!1.31e-09!57;UBERON:0002619!1.70e-09!22;UBERON:0001017!2.18e-09!82;UBERON:0000956!4.65e-09!25;UBERON:0000203!4.65e-09!25;UBERON:0005743!1.62e-08!86;UBERON:0000073!2.30e-08!94;UBERON:0001016!2.30e-08!94;UBERON:0001950!2.36e-08!20;UBERON:0000153!8.90e-08!129;UBERON:0007811!8.90e-08!129;UBERON:0000033!2.13e-07!123;UBERON:0000924!9.17e-07!173;UBERON:0006601!9.17e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.80e-12;32!UBERON:0002791;4.22e-11;32!UBERON:0001893;4.39e-10;34!UBERON:0002780;4.77e-10;41!UBERON:0001890;4.77e-10;41!UBERON:0000369;2.42e-09;4!UBERON:0002435;2.42e-09;4!UBERON:0000204;2.42e-09;4!UBERON:0002619;2.45e-09;22!UBERON:0003528;8.97e-09;34!UBERON:0002020;8.97e-09;34!UBERON:0000956;5.64e-08;25!UBERON:0000203;5.64e-08;25!UBERON:0005383;1.57e-07;3!UBERON:0005382;1.57e-07;3!UBERON:0002021;1.87e-07;5!UBERON:0001950;5.75e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.45e-13,32;UBERON:0002780,1.63e-12,41;UBERON:0001890,1.63e-12,41;UBERON:0003080,1.63e-12,41;UBERON:0006240,1.63e-12,41;UBERON:0001893,2.47e-12,34;UBERON:0002791,1.24e-11,32;UBERON:0003528,9.53e-11,34;UBERON:0002020,9.53e-11,34;UBERON:0000369,3.72e-10,4;UBERON:0002435,3.72e-10,4;UBERON:0000204,3.72e-10,4;UBERON:0010082,3.72e-10,4;UBERON:0002619,3.48e-09,22;UBERON:0001049,4.71e-09,56;UBERON:0005068,4.71e-09,56;UBERON:0006241,4.71e-09,56;UBERON:0007135,4.71e-09,56;UBERON:0000073,1.06e-08,53;UBERON:0002616,1.06e-08,53;UBERON:0000955,3.09e-08,68;UBERON:0006238,3.09e-08,68;UBERON:0005383,4.96e-08,3;UBERON:0005382,4.96e-08,3;UBERON:0003056,5.66e-08,61;UBERON:0000956,7.61e-08,25;UBERON:0000203,7.61e-08,25;UBERON:0001016,2.57e-07,89;UBERON:0002021,2.71e-07,5;UBERON:0001017,6.32e-07,81 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,0,0.491467873003018,0,0.655324116390517,0,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,0.136874425072884,0.376627918784408,0.305653622991805,0.246301768349837,0.157421562627358,0,0,0.928896739896456,0,0,0,0.852139206383318,1.42169232487422,0.587200878669695,0,0.802177789880567,0.434021741431704,1.11957737119962,1.94336199611388,1.54545340580512,0.436194716338694,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0.47296445977717,0,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0.561643155732475,0.450530678524519,0.964353520182481,1.42506371870624,0.39783335439818,0.182664153764634,1.75996244461323,0,0.889509253863555,1.28019066769952,0.400395987036012,0,0,0,0,0,1.14681968437569,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0,0,0.113309342697566,0,0.68725489096526,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.434473211648397,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.523916301990851,0.728590576585084,0.370784442784429,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0,0.626984899610432,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0.622422070799533,0.808264032418128,1.30769522490767,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0.352303495931295,0,0.421352420106746,0.61246251376468,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.487185025805993,0.252433774244115,0,0.161646056818812,0,0.403008392910561,0,0.57978255948989,0.272746120590835,0.573609190778008,0.609868530647977,0.132529768321485,0.348581828608555,0.310983165046111,0,0.72995471815166,0,0,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0,0.217879444092406,0.474541238222193,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0.882926198829301,0.614942192715568,0.171567810298526,0.219500570817251,0,0.201057944823262,0.555530670951178,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,1.71697232418975,1.23108503043699,0.936017060556951,0.891786973732369,0,0.335964256397719,0.567100388969546,0.806026704325635,0.290633938513962,0.766765358330422,0.492663237895943,0.352193736052904,0,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0.514137463516618,0,0.857479297891735,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,0,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0.560425719967636,0.197030760201927,0.431255149719035,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,2.99161459204025,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.468565659970853,0,0,0,0,0.184369168541703,0,0.391602314925481,0.343143423810856,1.44737618286021,1.07857100409308,0.320182673410333,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0.241718899183244,0.40101294060657,0.368323955743585,0.229628896329213,0.182091168006717,0.393373244878272,0.902399225814824,0.385076685522074,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0.657779629937804,0.261435451024901,0,0,0,0.618246069886334,1.00726411300178,0.082509499920588,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.435050081742686,0.170453254832202,0.356128142586949,0.495854746082934,1.15314040419064,1.53135254993501,1.31505115112215,0,0,0.6970372701606,0,0,0,0,0,1.116475108079,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,0.282431402330337,0,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0.79312517629427,0.85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| |||
|short_description=p8@NCOA2 | |||
}} |
Latest revision as of 00:10, 19 September 2015
Short description: | p8@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NCOA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_BC092442_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | Q569J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.45e-13 | 32 |
regional part of forebrain | 1.63e-12 | 41 |
forebrain | 1.63e-12 | 41 |
anterior neural tube | 1.63e-12 | 41 |
future forebrain | 1.63e-12 | 41 |
telencephalon | 2.47e-12 | 34 |
regional part of telencephalon | 1.24e-11 | 32 |
brain grey matter | 9.53e-11 | 34 |
gray matter | 9.53e-11 | 34 |
corpus striatum | 3.72e-10 | 4 |
striatum | 3.72e-10 | 4 |
ventral part of telencephalon | 3.72e-10 | 4 |
future corpus striatum | 3.72e-10 | 4 |
regional part of cerebral cortex | 3.48e-09 | 22 |
neural tube | 4.71e-09 | 56 |
neural rod | 4.71e-09 | 56 |
future spinal cord | 4.71e-09 | 56 |
neural keel | 4.71e-09 | 56 |
regional part of nervous system | 1.06e-08 | 53 |
regional part of brain | 1.06e-08 | 53 |
brain | 3.09e-08 | 68 |
future brain | 3.09e-08 | 68 |
caudate-putamen | 4.96e-08 | 3 |
dorsal striatum | 4.96e-08 | 3 |
pre-chordal neural plate | 5.66e-08 | 61 |
cerebral cortex | 7.61e-08 | 25 |
pallium | 7.61e-08 | 25 |
nervous system | 2.57e-07 | 89 |
occipital lobe | 2.71e-07 | 5 |
central nervous system | 6.32e-07 | 81 |